co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G11740

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine	0.00E+00
2	GO:0008064: regulation of actin polymerization or depolymerization	0.00E+00
3	GO:0051493: regulation of cytoskeleton organization	0.00E+00
4	GO:0036228: protein targeting to nuclear inner membrane	3.12E-05
5	GO:0033206: meiotic cytokinesis	3.12E-05
6	GO:0006430: lysyl-tRNA aminoacylation	3.12E-05
7	GO:0006999: nuclear pore organization	3.12E-05
8	GO:0010220: positive regulation of vernalization response	7.88E-05
9	GO:0043481: anthocyanin accumulation in tissues in response to UV light	2.04E-04
10	GO:0009658: chloroplast organization	2.66E-04
11	GO:0006808: regulation of nitrogen utilization	2.76E-04
12	GO:1900864: mitochondrial RNA modification	2.76E-04
13	GO:0071249: cellular response to nitrate	2.76E-04
14	GO:0016558: protein import into peroxisome matrix	3.53E-04
15	GO:2000033: regulation of seed dormancy process	5.20E-04
16	GO:0010098: suspensor development	6.07E-04
17	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	6.99E-04
18	GO:0010928: regulation of auxin mediated signaling pathway	6.99E-04
19	GO:0010100: negative regulation of photomorphogenesis	7.94E-04
20	GO:0009827: plant-type cell wall modification	7.94E-04
21	GO:0010233: phloem transport	7.94E-04
22	GO:0006261: DNA-dependent DNA replication	7.94E-04
23	GO:0006607: NLS-bearing protein import into nucleus	8.92E-04
24	GO:0048765: root hair cell differentiation	1.20E-03
25	GO:0010152: pollen maturation	1.31E-03
26	GO:0010020: chloroplast fission	1.55E-03
27	GO:0006270: DNA replication initiation	1.55E-03
28	GO:2000377: regulation of reactive oxygen species metabolic process	1.92E-03
29	GO:0009863: salicylic acid mediated signaling pathway	1.92E-03
30	GO:0010187: negative regulation of seed germination	1.92E-03
31	GO:0006418: tRNA aminoacylation for protein translation	2.05E-03
32	GO:0048443: stamen development	2.61E-03
33	GO:0051028: mRNA transport	2.75E-03
34	GO:0080022: primary root development	2.90E-03
35	GO:0010501: RNA secondary structure unwinding	2.90E-03
36	GO:0042335: cuticle development	2.90E-03
37	GO:0008360: regulation of cell shape	3.05E-03
38	GO:0009958: positive gravitropism	3.05E-03
39	GO:0006635: fatty acid beta-oxidation	3.51E-03
40	GO:0007264: small GTPase mediated signal transduction	3.68E-03
41	GO:0010029: regulation of seed germination	4.69E-03
42	GO:0006281: DNA repair	4.70E-03
43	GO:0048481: plant ovule development	5.42E-03
44	GO:0010218: response to far red light	5.79E-03
45	GO:0048527: lateral root development	5.99E-03
46	GO:0009867: jasmonic acid mediated signaling pathway	6.38E-03
47	GO:0006260: DNA replication	8.68E-03
48	GO:0042538: hyperosmotic salinity response	8.91E-03
49	GO:0006364: rRNA processing	9.36E-03
50	GO:0009585: red, far-red light phototransduction	9.36E-03
51	GO:0009909: regulation of flower development	1.01E-02
52	GO:0009740: gibberellic acid mediated signaling pathway	1.15E-02
53	GO:0006396: RNA processing	1.22E-02
54	GO:0009058: biosynthetic process	1.46E-02
55	GO:0040008: regulation of growth	1.71E-02
56	GO:0009739: response to gibberellin	1.91E-02
57	GO:0006355: regulation of transcription, DNA-templated	2.53E-02
58	GO:0006970: response to osmotic stress	2.54E-02
59	GO:0009723: response to ethylene	2.67E-02
60	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.88E-02
61	GO:0006351: transcription, DNA-templated	2.90E-02
62	GO:0016192: vesicle-mediated transport	2.91E-02
63	GO:0007275: multicellular organism development	3.33E-02
64	GO:0006629: lipid metabolic process	3.71E-02
65	GO:0048364: root development	3.82E-02
66	GO:0009793: embryo development ending in seed dormancy	3.91E-02
67	GO:0016310: phosphorylation	4.14E-02
68	GO:0009873: ethylene-activated signaling pathway	4.45E-02
69	GO:0009734: auxin-activated signaling pathway	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0004808: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity	0.00E+00
2	GO:0004824: lysine-tRNA ligase activity	3.12E-05
3	GO:0008469: histone-arginine N-methyltransferase activity	1.37E-04
4	GO:0008276: protein methyltransferase activity	2.04E-04
5	GO:0010011: auxin binding	2.76E-04
6	GO:0003697: single-stranded DNA binding	4.20E-04
7	GO:0003688: DNA replication origin binding	4.34E-04
8	GO:0017056: structural constituent of nuclear pore	6.99E-04
9	GO:0008271: secondary active sulfate transmembrane transporter activity	7.94E-04
10	GO:0000989: transcription factor activity, transcription factor binding	8.92E-04
11	GO:0005487: nucleocytoplasmic transporter activity	9.92E-04
12	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.20E-03
13	GO:0015116: sulfate transmembrane transporter activity	1.31E-03
14	GO:0009982: pseudouridine synthase activity	1.43E-03
15	GO:0003723: RNA binding	2.57E-03
16	GO:0004812: aminoacyl-tRNA ligase activity	2.75E-03
17	GO:0004527: exonuclease activity	3.05E-03
18	GO:0004518: nuclease activity	3.68E-03
19	GO:0003729: mRNA binding	4.69E-03
20	GO:0004004: ATP-dependent RNA helicase activity	5.05E-03
21	GO:0004712: protein serine/threonine/tyrosine kinase activity	6.77E-03
22	GO:0016887: ATPase activity	7.27E-03
23	GO:0015293: symporter activity	8.24E-03
24	GO:0003690: double-stranded DNA binding	9.59E-03
25	GO:0016298: lipase activity	9.59E-03
26	GO:0016874: ligase activity	1.15E-02
27	GO:0008026: ATP-dependent helicase activity	1.25E-02
28	GO:0003677: DNA binding	1.41E-02
29	GO:0003824: catalytic activity	1.86E-02
30	GO:0046983: protein dimerization activity	2.26E-02
31	GO:0005524: ATP binding	2.47E-02
32	GO:0042803: protein homodimerization activity	3.30E-02
33	GO:0008289: lipid binding	4.69E-02