GO Enrichment Analysis of Co-expressed Genes with
AT1G11720
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006982: response to lipid hydroperoxide | 0.00E+00 |
| 2 | GO:0010335: response to non-ionic osmotic stress | 0.00E+00 |
| 3 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 4 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 5 | GO:0015979: photosynthesis | 1.77E-11 |
| 6 | GO:0032544: plastid translation | 4.97E-09 |
| 7 | GO:0009854: oxidative photosynthetic carbon pathway | 2.38E-07 |
| 8 | GO:0015995: chlorophyll biosynthetic process | 4.15E-06 |
| 9 | GO:0018298: protein-chromophore linkage | 5.19E-06 |
| 10 | GO:0010021: amylopectin biosynthetic process | 9.95E-06 |
| 11 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.31E-05 |
| 12 | GO:0050665: hydrogen peroxide biosynthetic process | 2.49E-05 |
| 13 | GO:0009658: chloroplast organization | 3.03E-05 |
| 14 | GO:0010189: vitamin E biosynthetic process | 3.53E-05 |
| 15 | GO:0009735: response to cytokinin | 4.04E-05 |
| 16 | GO:0019252: starch biosynthetic process | 4.38E-05 |
| 17 | GO:0009645: response to low light intensity stimulus | 4.78E-05 |
| 18 | GO:0009704: de-etiolation | 6.23E-05 |
| 19 | GO:0031998: regulation of fatty acid beta-oxidation | 1.06E-04 |
| 20 | GO:0034337: RNA folding | 1.06E-04 |
| 21 | GO:0043953: protein transport by the Tat complex | 1.06E-04 |
| 22 | GO:0051775: response to redox state | 1.06E-04 |
| 23 | GO:0071277: cellular response to calcium ion | 1.06E-04 |
| 24 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.06E-04 |
| 25 | GO:1904964: positive regulation of phytol biosynthetic process | 1.06E-04 |
| 26 | GO:0065002: intracellular protein transmembrane transport | 1.06E-04 |
| 27 | GO:0080093: regulation of photorespiration | 1.06E-04 |
| 28 | GO:0009773: photosynthetic electron transport in photosystem I | 1.65E-04 |
| 29 | GO:0055114: oxidation-reduction process | 2.00E-04 |
| 30 | GO:0006094: gluconeogenesis | 2.19E-04 |
| 31 | GO:0006108: malate metabolic process | 2.19E-04 |
| 32 | GO:0006729: tetrahydrobiopterin biosynthetic process | 2.48E-04 |
| 33 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.48E-04 |
| 34 | GO:0042819: vitamin B6 biosynthetic process | 2.48E-04 |
| 35 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.48E-04 |
| 36 | GO:0019253: reductive pentose-phosphate cycle | 2.49E-04 |
| 37 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.14E-04 |
| 38 | GO:0005977: glycogen metabolic process | 4.12E-04 |
| 39 | GO:0006000: fructose metabolic process | 4.12E-04 |
| 40 | GO:0006518: peptide metabolic process | 4.12E-04 |
| 41 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.92E-04 |
| 42 | GO:0006107: oxaloacetate metabolic process | 5.92E-04 |
| 43 | GO:0042823: pyridoxal phosphate biosynthetic process | 5.92E-04 |
| 44 | GO:0008615: pyridoxine biosynthetic process | 5.92E-04 |
| 45 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 5.92E-04 |
| 46 | GO:0005975: carbohydrate metabolic process | 6.34E-04 |
| 47 | GO:0015976: carbon utilization | 7.86E-04 |
| 48 | GO:0045727: positive regulation of translation | 7.86E-04 |
| 49 | GO:0015994: chlorophyll metabolic process | 7.86E-04 |
| 50 | GO:0006536: glutamate metabolic process | 7.86E-04 |
| 51 | GO:0010600: regulation of auxin biosynthetic process | 7.86E-04 |
| 52 | GO:0006734: NADH metabolic process | 7.86E-04 |
| 53 | GO:0006097: glyoxylate cycle | 9.92E-04 |
| 54 | GO:0009107: lipoate biosynthetic process | 9.92E-04 |
| 55 | GO:0006656: phosphatidylcholine biosynthetic process | 9.92E-04 |
| 56 | GO:0043097: pyrimidine nucleoside salvage | 9.92E-04 |
| 57 | GO:0010236: plastoquinone biosynthetic process | 9.92E-04 |
| 58 | GO:0042549: photosystem II stabilization | 1.21E-03 |
| 59 | GO:0006206: pyrimidine nucleobase metabolic process | 1.21E-03 |
| 60 | GO:0042742: defense response to bacterium | 1.23E-03 |
| 61 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.45E-03 |
| 62 | GO:1901259: chloroplast rRNA processing | 1.45E-03 |
| 63 | GO:0010161: red light signaling pathway | 1.70E-03 |
| 64 | GO:0009772: photosynthetic electron transport in photosystem II | 1.70E-03 |
| 65 | GO:1900057: positive regulation of leaf senescence | 1.70E-03 |
| 66 | GO:0009853: photorespiration | 1.94E-03 |
| 67 | GO:0010928: regulation of auxin mediated signaling pathway | 1.97E-03 |
| 68 | GO:0006099: tricarboxylic acid cycle | 2.03E-03 |
| 69 | GO:0006002: fructose 6-phosphate metabolic process | 2.24E-03 |
| 70 | GO:0071482: cellular response to light stimulus | 2.24E-03 |
| 71 | GO:0090333: regulation of stomatal closure | 2.53E-03 |
| 72 | GO:0006783: heme biosynthetic process | 2.53E-03 |
| 73 | GO:0006754: ATP biosynthetic process | 2.53E-03 |
| 74 | GO:0009644: response to high light intensity | 2.70E-03 |
| 75 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.84E-03 |
| 76 | GO:0045036: protein targeting to chloroplast | 3.15E-03 |
| 77 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.15E-03 |
| 78 | GO:0019684: photosynthesis, light reaction | 3.47E-03 |
| 79 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.47E-03 |
| 80 | GO:0005986: sucrose biosynthetic process | 4.16E-03 |
| 81 | GO:0006807: nitrogen compound metabolic process | 4.16E-03 |
| 82 | GO:0009266: response to temperature stimulus | 4.52E-03 |
| 83 | GO:0010207: photosystem II assembly | 4.52E-03 |
| 84 | GO:0007031: peroxisome organization | 4.88E-03 |
| 85 | GO:0019748: secondary metabolic process | 6.87E-03 |
| 86 | GO:0010017: red or far-red light signaling pathway | 6.87E-03 |
| 87 | GO:0016226: iron-sulfur cluster assembly | 6.87E-03 |
| 88 | GO:0030433: ubiquitin-dependent ERAD pathway | 6.87E-03 |
| 89 | GO:0007005: mitochondrion organization | 6.87E-03 |
| 90 | GO:0006633: fatty acid biosynthetic process | 7.46E-03 |
| 91 | GO:0006606: protein import into nucleus | 8.64E-03 |
| 92 | GO:0042631: cellular response to water deprivation | 8.64E-03 |
| 93 | GO:0006520: cellular amino acid metabolic process | 9.10E-03 |
| 94 | GO:0006810: transport | 9.47E-03 |
| 95 | GO:0006814: sodium ion transport | 9.58E-03 |
| 96 | GO:0009646: response to absence of light | 9.58E-03 |
| 97 | GO:0015986: ATP synthesis coupled proton transport | 9.58E-03 |
| 98 | GO:0009791: post-embryonic development | 1.01E-02 |
| 99 | GO:0000302: response to reactive oxygen species | 1.06E-02 |
| 100 | GO:0009567: double fertilization forming a zygote and endosperm | 1.21E-02 |
| 101 | GO:0010027: thylakoid membrane organization | 1.37E-02 |
| 102 | GO:0042128: nitrate assimilation | 1.48E-02 |
| 103 | GO:0010218: response to far red light | 1.77E-02 |
| 104 | GO:0007568: aging | 1.83E-02 |
| 105 | GO:0009637: response to blue light | 1.95E-02 |
| 106 | GO:0016051: carbohydrate biosynthetic process | 1.95E-02 |
| 107 | GO:0034599: cellular response to oxidative stress | 2.02E-02 |
| 108 | GO:0006412: translation | 2.16E-02 |
| 109 | GO:0032259: methylation | 2.23E-02 |
| 110 | GO:0010114: response to red light | 2.34E-02 |
| 111 | GO:0000209: protein polyubiquitination | 2.41E-02 |
| 112 | GO:0042538: hyperosmotic salinity response | 2.75E-02 |
| 113 | GO:0006364: rRNA processing | 2.89E-02 |
| 114 | GO:0009585: red, far-red light phototransduction | 2.89E-02 |
| 115 | GO:0010224: response to UV-B | 2.97E-02 |
| 116 | GO:0009409: response to cold | 3.18E-02 |
| 117 | GO:0006096: glycolytic process | 3.26E-02 |
| 118 | GO:0009624: response to nematode | 3.72E-02 |
| 119 | GO:0009416: response to light stimulus | 4.13E-02 |
| 120 | GO:0009058: biosynthetic process | 4.53E-02 |
| 121 | GO:0009845: seed germination | 4.61E-02 |
| 122 | GO:0042744: hydrogen peroxide catabolic process | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 2 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 3 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 6 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 7 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 8 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 9 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 10 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 11 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 12 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 13 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 14 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 15 | GO:0019843: rRNA binding | 1.80E-07 |
| 16 | GO:0016168: chlorophyll binding | 3.28E-06 |
| 17 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 5.26E-06 |
| 18 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 5.26E-06 |
| 19 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 5.26E-06 |
| 20 | GO:0031409: pigment binding | 9.20E-06 |
| 21 | GO:0008891: glycolate oxidase activity | 9.95E-06 |
| 22 | GO:0016615: malate dehydrogenase activity | 2.49E-05 |
| 23 | GO:0030060: L-malate dehydrogenase activity | 3.53E-05 |
| 24 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.06E-04 |
| 25 | GO:0016776: phosphotransferase activity, phosphate group as acceptor | 1.06E-04 |
| 26 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.06E-04 |
| 27 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.06E-04 |
| 28 | GO:0042389: omega-3 fatty acid desaturase activity | 2.48E-04 |
| 29 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.48E-04 |
| 30 | GO:0033201: alpha-1,4-glucan synthase activity | 2.48E-04 |
| 31 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.48E-04 |
| 32 | GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity | 2.48E-04 |
| 33 | GO:0019156: isoamylase activity | 2.48E-04 |
| 34 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 2.48E-04 |
| 35 | GO:0008883: glutamyl-tRNA reductase activity | 2.48E-04 |
| 36 | GO:0008266: poly(U) RNA binding | 2.49E-04 |
| 37 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 4.12E-04 |
| 38 | GO:0004373: glycogen (starch) synthase activity | 4.12E-04 |
| 39 | GO:0016992: lipoate synthase activity | 4.12E-04 |
| 40 | GO:0004351: glutamate decarboxylase activity | 5.92E-04 |
| 41 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 5.92E-04 |
| 42 | GO:0016851: magnesium chelatase activity | 5.92E-04 |
| 43 | GO:0010181: FMN binding | 7.35E-04 |
| 44 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.86E-04 |
| 45 | GO:0008453: alanine-glyoxylate transaminase activity | 7.86E-04 |
| 46 | GO:0043495: protein anchor | 7.86E-04 |
| 47 | GO:0009011: starch synthase activity | 7.86E-04 |
| 48 | GO:0004332: fructose-bisphosphate aldolase activity | 1.21E-03 |
| 49 | GO:0004130: cytochrome-c peroxidase activity | 1.21E-03 |
| 50 | GO:0042578: phosphoric ester hydrolase activity | 1.21E-03 |
| 51 | GO:0004556: alpha-amylase activity | 1.21E-03 |
| 52 | GO:0004849: uridine kinase activity | 1.45E-03 |
| 53 | GO:0004222: metalloendopeptidase activity | 1.70E-03 |
| 54 | GO:0019899: enzyme binding | 1.70E-03 |
| 55 | GO:0003746: translation elongation factor activity | 1.94E-03 |
| 56 | GO:0016491: oxidoreductase activity | 1.99E-03 |
| 57 | GO:0005515: protein binding | 2.00E-03 |
| 58 | GO:0008135: translation factor activity, RNA binding | 2.24E-03 |
| 59 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.24E-03 |
| 60 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.70E-03 |
| 61 | GO:0030234: enzyme regulator activity | 3.15E-03 |
| 62 | GO:0042803: protein homodimerization activity | 3.50E-03 |
| 63 | GO:0003735: structural constituent of ribosome | 4.10E-03 |
| 64 | GO:0004089: carbonate dehydratase activity | 4.16E-03 |
| 65 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.16E-03 |
| 66 | GO:0051536: iron-sulfur cluster binding | 5.65E-03 |
| 67 | GO:0022891: substrate-specific transmembrane transporter activity | 7.30E-03 |
| 68 | GO:0008514: organic anion transmembrane transporter activity | 7.74E-03 |
| 69 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 9.10E-03 |
| 70 | GO:0050662: coenzyme binding | 9.58E-03 |
| 71 | GO:0042802: identical protein binding | 1.04E-02 |
| 72 | GO:0048038: quinone binding | 1.06E-02 |
| 73 | GO:0004721: phosphoprotein phosphatase activity | 1.54E-02 |
| 74 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.59E-02 |
| 75 | GO:0050661: NADP binding | 2.14E-02 |
| 76 | GO:0004185: serine-type carboxypeptidase activity | 2.34E-02 |
| 77 | GO:0015293: symporter activity | 2.54E-02 |
| 78 | GO:0051287: NAD binding | 2.68E-02 |
| 79 | GO:0031625: ubiquitin protein ligase binding | 3.11E-02 |
| 80 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.33E-02 |
| 81 | GO:0004650: polygalacturonase activity | 3.49E-02 |
| 82 | GO:0003729: mRNA binding | 3.58E-02 |
| 83 | GO:0004252: serine-type endopeptidase activity | 4.70E-02 |
| 84 | GO:0030170: pyridoxal phosphate binding | 4.70E-02 |
| 85 | GO:0008565: protein transporter activity | 4.95E-02 |
| 86 | GO:0015144: carbohydrate transmembrane transporter activity | 4.95E-02 |