GO Enrichment Analysis of Co-expressed Genes with
AT1G11380
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015843: methylammonium transport | 0.00E+00 |
| 2 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 3 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 4 | GO:0046719: regulation by virus of viral protein levels in host cell | 0.00E+00 |
| 5 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 6 | GO:0035884: arabinan biosynthetic process | 0.00E+00 |
| 7 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 8 | GO:0009606: tropism | 0.00E+00 |
| 9 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 10 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 11 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 12 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 13 | GO:0080127: fruit septum development | 0.00E+00 |
| 14 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 15 | GO:0046620: regulation of organ growth | 6.79E-10 |
| 16 | GO:0042793: transcription from plastid promoter | 1.25E-08 |
| 17 | GO:0009926: auxin polar transport | 1.32E-06 |
| 18 | GO:0009658: chloroplast organization | 1.43E-06 |
| 19 | GO:0009734: auxin-activated signaling pathway | 5.54E-06 |
| 20 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.35E-05 |
| 21 | GO:0009451: RNA modification | 4.44E-05 |
| 22 | GO:0009733: response to auxin | 4.96E-05 |
| 23 | GO:2000038: regulation of stomatal complex development | 6.35E-05 |
| 24 | GO:0009913: epidermal cell differentiation | 1.45E-04 |
| 25 | GO:0016998: cell wall macromolecule catabolic process | 1.61E-04 |
| 26 | GO:0006955: immune response | 2.57E-04 |
| 27 | GO:0034757: negative regulation of iron ion transport | 3.14E-04 |
| 28 | GO:0034970: histone H3-R2 methylation | 3.14E-04 |
| 29 | GO:0042659: regulation of cell fate specification | 3.14E-04 |
| 30 | GO:0034972: histone H3-R26 methylation | 3.14E-04 |
| 31 | GO:0043971: histone H3-K18 acetylation | 3.14E-04 |
| 32 | GO:0090558: plant epidermis development | 3.14E-04 |
| 33 | GO:1903866: palisade mesophyll development | 3.14E-04 |
| 34 | GO:0010480: microsporocyte differentiation | 3.14E-04 |
| 35 | GO:0034971: histone H3-R17 methylation | 3.14E-04 |
| 36 | GO:0035987: endodermal cell differentiation | 3.14E-04 |
| 37 | GO:0043609: regulation of carbon utilization | 3.14E-04 |
| 38 | GO:0006436: tryptophanyl-tRNA aminoacylation | 3.14E-04 |
| 39 | GO:0042255: ribosome assembly | 3.24E-04 |
| 40 | GO:0007389: pattern specification process | 3.98E-04 |
| 41 | GO:0032502: developmental process | 4.63E-04 |
| 42 | GO:0010252: auxin homeostasis | 5.44E-04 |
| 43 | GO:1900865: chloroplast RNA modification | 5.66E-04 |
| 44 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 6.87E-04 |
| 45 | GO:2000123: positive regulation of stomatal complex development | 6.87E-04 |
| 46 | GO:0010254: nectary development | 6.87E-04 |
| 47 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.87E-04 |
| 48 | GO:1902884: positive regulation of response to oxidative stress | 6.87E-04 |
| 49 | GO:0010434: bract formation | 6.87E-04 |
| 50 | GO:0070981: L-asparagine biosynthetic process | 6.87E-04 |
| 51 | GO:0010271: regulation of chlorophyll catabolic process | 6.87E-04 |
| 52 | GO:0048439: flower morphogenesis | 6.87E-04 |
| 53 | GO:0009662: etioplast organization | 6.87E-04 |
| 54 | GO:1900033: negative regulation of trichome patterning | 6.87E-04 |
| 55 | GO:1904143: positive regulation of carotenoid biosynthetic process | 6.87E-04 |
| 56 | GO:0080009: mRNA methylation | 6.87E-04 |
| 57 | GO:0006529: asparagine biosynthetic process | 6.87E-04 |
| 58 | GO:0010582: floral meristem determinacy | 8.70E-04 |
| 59 | GO:0009432: SOS response | 1.11E-03 |
| 60 | GO:0090708: specification of plant organ axis polarity | 1.11E-03 |
| 61 | GO:0006000: fructose metabolic process | 1.11E-03 |
| 62 | GO:0080117: secondary growth | 1.11E-03 |
| 63 | GO:0090391: granum assembly | 1.11E-03 |
| 64 | GO:0071705: nitrogen compound transport | 1.11E-03 |
| 65 | GO:0009954: proximal/distal pattern formation | 1.11E-03 |
| 66 | GO:0010371: regulation of gibberellin biosynthetic process | 1.60E-03 |
| 67 | GO:1902476: chloride transmembrane transport | 1.60E-03 |
| 68 | GO:0010239: chloroplast mRNA processing | 1.60E-03 |
| 69 | GO:0044211: CTP salvage | 1.60E-03 |
| 70 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 1.60E-03 |
| 71 | GO:0009800: cinnamic acid biosynthetic process | 1.60E-03 |
| 72 | GO:0015696: ammonium transport | 1.60E-03 |
| 73 | GO:0046739: transport of virus in multicellular host | 1.60E-03 |
| 74 | GO:2000904: regulation of starch metabolic process | 1.60E-03 |
| 75 | GO:0000730: DNA recombinase assembly | 1.60E-03 |
| 76 | GO:0008380: RNA splicing | 2.12E-03 |
| 77 | GO:1900864: mitochondrial RNA modification | 2.14E-03 |
| 78 | GO:0071249: cellular response to nitrate | 2.14E-03 |
| 79 | GO:0072488: ammonium transmembrane transport | 2.14E-03 |
| 80 | GO:0030104: water homeostasis | 2.14E-03 |
| 81 | GO:0044206: UMP salvage | 2.14E-03 |
| 82 | GO:0006346: methylation-dependent chromatin silencing | 2.14E-03 |
| 83 | GO:0006479: protein methylation | 2.14E-03 |
| 84 | GO:0048629: trichome patterning | 2.14E-03 |
| 85 | GO:0016123: xanthophyll biosynthetic process | 2.74E-03 |
| 86 | GO:0032876: negative regulation of DNA endoreduplication | 2.74E-03 |
| 87 | GO:0030308: negative regulation of cell growth | 2.74E-03 |
| 88 | GO:0010375: stomatal complex patterning | 2.74E-03 |
| 89 | GO:0006544: glycine metabolic process | 2.74E-03 |
| 90 | GO:0048497: maintenance of floral organ identity | 2.74E-03 |
| 91 | GO:0009646: response to absence of light | 3.24E-03 |
| 92 | GO:0016554: cytidine to uridine editing | 3.38E-03 |
| 93 | GO:0010315: auxin efflux | 3.38E-03 |
| 94 | GO:0006559: L-phenylalanine catabolic process | 3.38E-03 |
| 95 | GO:0048831: regulation of shoot system development | 3.38E-03 |
| 96 | GO:0006206: pyrimidine nucleobase metabolic process | 3.38E-03 |
| 97 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 3.38E-03 |
| 98 | GO:0003006: developmental process involved in reproduction | 3.38E-03 |
| 99 | GO:0006563: L-serine metabolic process | 3.38E-03 |
| 100 | GO:0010405: arabinogalactan protein metabolic process | 3.38E-03 |
| 101 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 3.38E-03 |
| 102 | GO:0048825: cotyledon development | 3.47E-03 |
| 103 | GO:2000037: regulation of stomatal complex patterning | 4.06E-03 |
| 104 | GO:2000067: regulation of root morphogenesis | 4.06E-03 |
| 105 | GO:0009955: adaxial/abaxial pattern specification | 4.06E-03 |
| 106 | GO:0071470: cellular response to osmotic stress | 4.06E-03 |
| 107 | GO:1901259: chloroplast rRNA processing | 4.06E-03 |
| 108 | GO:0048509: regulation of meristem development | 4.06E-03 |
| 109 | GO:0030488: tRNA methylation | 4.06E-03 |
| 110 | GO:0042148: strand invasion | 4.80E-03 |
| 111 | GO:0048437: floral organ development | 4.80E-03 |
| 112 | GO:0006821: chloride transport | 4.80E-03 |
| 113 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 4.80E-03 |
| 114 | GO:0009416: response to light stimulus | 5.37E-03 |
| 115 | GO:0001522: pseudouridine synthesis | 5.57E-03 |
| 116 | GO:0030162: regulation of proteolysis | 5.57E-03 |
| 117 | GO:0006353: DNA-templated transcription, termination | 5.57E-03 |
| 118 | GO:0048766: root hair initiation | 5.57E-03 |
| 119 | GO:0055075: potassium ion homeostasis | 5.57E-03 |
| 120 | GO:0006002: fructose 6-phosphate metabolic process | 6.39E-03 |
| 121 | GO:0009827: plant-type cell wall modification | 6.39E-03 |
| 122 | GO:0010212: response to ionizing radiation | 6.39E-03 |
| 123 | GO:0010497: plasmodesmata-mediated intercellular transport | 6.39E-03 |
| 124 | GO:0044030: regulation of DNA methylation | 6.39E-03 |
| 125 | GO:0006355: regulation of transcription, DNA-templated | 6.58E-03 |
| 126 | GO:0048507: meristem development | 7.24E-03 |
| 127 | GO:0000373: Group II intron splicing | 7.24E-03 |
| 128 | GO:0000160: phosphorelay signal transduction system | 7.37E-03 |
| 129 | GO:0040008: regulation of growth | 7.62E-03 |
| 130 | GO:0035999: tetrahydrofolate interconversion | 8.14E-03 |
| 131 | GO:0042761: very long-chain fatty acid biosynthetic process | 8.14E-03 |
| 132 | GO:2000280: regulation of root development | 8.14E-03 |
| 133 | GO:0006349: regulation of gene expression by genetic imprinting | 8.14E-03 |
| 134 | GO:0010048: vernalization response | 9.07E-03 |
| 135 | GO:0010015: root morphogenesis | 1.00E-02 |
| 136 | GO:0048229: gametophyte development | 1.00E-02 |
| 137 | GO:0048765: root hair cell differentiation | 1.00E-02 |
| 138 | GO:0008361: regulation of cell size | 1.11E-02 |
| 139 | GO:0006312: mitotic recombination | 1.11E-02 |
| 140 | GO:0015706: nitrate transport | 1.11E-02 |
| 141 | GO:0009793: embryo development ending in seed dormancy | 1.14E-02 |
| 142 | GO:0009767: photosynthetic electron transport chain | 1.21E-02 |
| 143 | GO:0010075: regulation of meristem growth | 1.21E-02 |
| 144 | GO:0009934: regulation of meristem structural organization | 1.32E-02 |
| 145 | GO:0048467: gynoecium development | 1.32E-02 |
| 146 | GO:0010143: cutin biosynthetic process | 1.32E-02 |
| 147 | GO:0006541: glutamine metabolic process | 1.32E-02 |
| 148 | GO:0010020: chloroplast fission | 1.32E-02 |
| 149 | GO:0080188: RNA-directed DNA methylation | 1.43E-02 |
| 150 | GO:0010167: response to nitrate | 1.43E-02 |
| 151 | GO:0006071: glycerol metabolic process | 1.54E-02 |
| 152 | GO:0006833: water transport | 1.54E-02 |
| 153 | GO:0009736: cytokinin-activated signaling pathway | 1.55E-02 |
| 154 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.66E-02 |
| 155 | GO:0080147: root hair cell development | 1.66E-02 |
| 156 | GO:0009909: regulation of flower development | 1.72E-02 |
| 157 | GO:0051302: regulation of cell division | 1.78E-02 |
| 158 | GO:0006418: tRNA aminoacylation for protein translation | 1.78E-02 |
| 159 | GO:0080167: response to karrikin | 1.85E-02 |
| 160 | GO:0010431: seed maturation | 1.91E-02 |
| 161 | GO:0006306: DNA methylation | 1.91E-02 |
| 162 | GO:0006351: transcription, DNA-templated | 1.94E-02 |
| 163 | GO:0031348: negative regulation of defense response | 2.03E-02 |
| 164 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.16E-02 |
| 165 | GO:0071215: cellular response to abscisic acid stimulus | 2.16E-02 |
| 166 | GO:0010082: regulation of root meristem growth | 2.16E-02 |
| 167 | GO:0010227: floral organ abscission | 2.16E-02 |
| 168 | GO:0006284: base-excision repair | 2.29E-02 |
| 169 | GO:0070417: cellular response to cold | 2.43E-02 |
| 170 | GO:0048653: anther development | 2.57E-02 |
| 171 | GO:0042631: cellular response to water deprivation | 2.57E-02 |
| 172 | GO:0042335: cuticle development | 2.57E-02 |
| 173 | GO:0010501: RNA secondary structure unwinding | 2.57E-02 |
| 174 | GO:0010087: phloem or xylem histogenesis | 2.57E-02 |
| 175 | GO:0009741: response to brassinosteroid | 2.71E-02 |
| 176 | GO:0009960: endosperm development | 2.71E-02 |
| 177 | GO:0009958: positive gravitropism | 2.71E-02 |
| 178 | GO:0007018: microtubule-based movement | 2.85E-02 |
| 179 | GO:0006814: sodium ion transport | 2.85E-02 |
| 180 | GO:0009058: biosynthetic process | 2.93E-02 |
| 181 | GO:0009845: seed germination | 3.00E-02 |
| 182 | GO:0009851: auxin biosynthetic process | 3.00E-02 |
| 183 | GO:0006281: DNA repair | 3.02E-02 |
| 184 | GO:0006468: protein phosphorylation | 3.05E-02 |
| 185 | GO:0080156: mitochondrial mRNA modification | 3.15E-02 |
| 186 | GO:0048364: root development | 3.19E-02 |
| 187 | GO:0009790: embryo development | 3.24E-02 |
| 188 | GO:0009630: gravitropism | 3.30E-02 |
| 189 | GO:0010583: response to cyclopentenone | 3.30E-02 |
| 190 | GO:0031047: gene silencing by RNA | 3.30E-02 |
| 191 | GO:0019761: glucosinolate biosynthetic process | 3.30E-02 |
| 192 | GO:0010090: trichome morphogenesis | 3.45E-02 |
| 193 | GO:0009828: plant-type cell wall loosening | 3.61E-02 |
| 194 | GO:0006310: DNA recombination | 3.61E-02 |
| 195 | GO:0007267: cell-cell signaling | 3.77E-02 |
| 196 | GO:0001666: response to hypoxia | 4.09E-02 |
| 197 | GO:0010027: thylakoid membrane organization | 4.09E-02 |
| 198 | GO:0010029: regulation of seed germination | 4.25E-02 |
| 199 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 4.27E-02 |
| 200 | GO:0006974: cellular response to DNA damage stimulus | 4.42E-02 |
| 201 | GO:0010411: xyloglucan metabolic process | 4.59E-02 |
| 202 | GO:0016567: protein ubiquitination | 4.87E-02 |
| 203 | GO:0048481: plant ovule development | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042834: peptidoglycan binding | 0.00E+00 |
| 2 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 3 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 4 | GO:0003727: single-stranded RNA binding | 1.26E-05 |
| 5 | GO:0004519: endonuclease activity | 1.15E-04 |
| 6 | GO:0004016: adenylate cyclase activity | 3.14E-04 |
| 7 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 3.14E-04 |
| 8 | GO:0004071: aspartate-ammonia ligase activity | 3.14E-04 |
| 9 | GO:0016274: protein-arginine N-methyltransferase activity | 3.14E-04 |
| 10 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.14E-04 |
| 11 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 3.14E-04 |
| 12 | GO:0004830: tryptophan-tRNA ligase activity | 3.14E-04 |
| 13 | GO:0009672: auxin:proton symporter activity | 5.66E-04 |
| 14 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 6.87E-04 |
| 15 | GO:0009884: cytokinin receptor activity | 6.87E-04 |
| 16 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 6.87E-04 |
| 17 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 6.87E-04 |
| 18 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 6.87E-04 |
| 19 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 6.87E-04 |
| 20 | GO:0009982: pseudouridine synthase activity | 9.84E-04 |
| 21 | GO:0010329: auxin efflux transmembrane transporter activity | 9.84E-04 |
| 22 | GO:0008469: histone-arginine N-methyltransferase activity | 1.11E-03 |
| 23 | GO:0052722: fatty acid in-chain hydroxylase activity | 1.11E-03 |
| 24 | GO:0017150: tRNA dihydrouridine synthase activity | 1.11E-03 |
| 25 | GO:0045548: phenylalanine ammonia-lyase activity | 1.11E-03 |
| 26 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 1.11E-03 |
| 27 | GO:0005034: osmosensor activity | 1.11E-03 |
| 28 | GO:0003697: single-stranded DNA binding | 1.28E-03 |
| 29 | GO:0008508: bile acid:sodium symporter activity | 1.60E-03 |
| 30 | GO:0001872: (1->3)-beta-D-glucan binding | 1.60E-03 |
| 31 | GO:0004845: uracil phosphoribosyltransferase activity | 2.14E-03 |
| 32 | GO:0010385: double-stranded methylated DNA binding | 2.14E-03 |
| 33 | GO:0005253: anion channel activity | 2.14E-03 |
| 34 | GO:0005215: transporter activity | 2.32E-03 |
| 35 | GO:0003690: double-stranded DNA binding | 2.69E-03 |
| 36 | GO:0008725: DNA-3-methyladenine glycosylase activity | 2.74E-03 |
| 37 | GO:0004372: glycine hydroxymethyltransferase activity | 2.74E-03 |
| 38 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.74E-03 |
| 39 | GO:0003723: RNA binding | 2.78E-03 |
| 40 | GO:0003777: microtubule motor activity | 2.93E-03 |
| 41 | GO:2001070: starch binding | 3.38E-03 |
| 42 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 3.38E-03 |
| 43 | GO:0008519: ammonium transmembrane transporter activity | 3.38E-03 |
| 44 | GO:0005247: voltage-gated chloride channel activity | 3.38E-03 |
| 45 | GO:0019901: protein kinase binding | 3.47E-03 |
| 46 | GO:0008195: phosphatidate phosphatase activity | 4.06E-03 |
| 47 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 4.06E-03 |
| 48 | GO:0004849: uridine kinase activity | 4.06E-03 |
| 49 | GO:0019900: kinase binding | 4.06E-03 |
| 50 | GO:0000150: recombinase activity | 4.80E-03 |
| 51 | GO:0019843: rRNA binding | 5.36E-03 |
| 52 | GO:0000400: four-way junction DNA binding | 5.57E-03 |
| 53 | GO:0004520: endodeoxyribonuclease activity | 5.57E-03 |
| 54 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 7.24E-03 |
| 55 | GO:0004673: protein histidine kinase activity | 9.07E-03 |
| 56 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.00E-02 |
| 57 | GO:0008559: xenobiotic-transporting ATPase activity | 1.00E-02 |
| 58 | GO:0004674: protein serine/threonine kinase activity | 1.02E-02 |
| 59 | GO:0003677: DNA binding | 1.05E-02 |
| 60 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.21E-02 |
| 61 | GO:0031072: heat shock protein binding | 1.21E-02 |
| 62 | GO:0000155: phosphorelay sensor kinase activity | 1.21E-02 |
| 63 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.32E-02 |
| 64 | GO:0043424: protein histidine kinase binding | 1.78E-02 |
| 65 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.78E-02 |
| 66 | GO:0008094: DNA-dependent ATPase activity | 1.91E-02 |
| 67 | GO:0004176: ATP-dependent peptidase activity | 1.91E-02 |
| 68 | GO:0033612: receptor serine/threonine kinase binding | 1.91E-02 |
| 69 | GO:0004650: polygalacturonase activity | 2.02E-02 |
| 70 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 2.33E-02 |
| 71 | GO:0004812: aminoacyl-tRNA ligase activity | 2.43E-02 |
| 72 | GO:0018024: histone-lysine N-methyltransferase activity | 2.43E-02 |
| 73 | GO:0004871: signal transducer activity | 2.47E-02 |
| 74 | GO:0004402: histone acetyltransferase activity | 2.57E-02 |
| 75 | GO:0043565: sequence-specific DNA binding | 2.60E-02 |
| 76 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 2.66E-02 |
| 77 | GO:0003713: transcription coactivator activity | 2.71E-02 |
| 78 | GO:0005524: ATP binding | 3.06E-02 |
| 79 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.15E-02 |
| 80 | GO:0000156: phosphorelay response regulator activity | 3.45E-02 |
| 81 | GO:0005515: protein binding | 3.61E-02 |
| 82 | GO:0016759: cellulose synthase activity | 3.61E-02 |
| 83 | GO:0008237: metallopeptidase activity | 3.77E-02 |
| 84 | GO:0051213: dioxygenase activity | 4.09E-02 |
| 85 | GO:0008289: lipid binding | 4.54E-02 |
| 86 | GO:0004004: ATP-dependent RNA helicase activity | 4.59E-02 |
| 87 | GO:0030247: polysaccharide binding | 4.59E-02 |
| 88 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.59E-02 |
| 89 | GO:0042802: identical protein binding | 4.84E-02 |