Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G10522

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080127: fruit septum development0.00E+00
2GO:0019988: charged-tRNA amino acid modification0.00E+00
3GO:0090615: mitochondrial mRNA processing0.00E+00
4GO:0042794: rRNA transcription from plastid promoter0.00E+00
5GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway0.00E+00
6GO:0045014: negative regulation of transcription by glucose0.00E+00
7GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
8GO:0090627: plant epidermal cell differentiation0.00E+00
9GO:0009606: tropism0.00E+00
10GO:0035884: arabinan biosynthetic process0.00E+00
11GO:0090322: regulation of superoxide metabolic process0.00E+00
12GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement0.00E+00
13GO:0042793: transcription from plastid promoter6.77E-08
14GO:0009658: chloroplast organization2.27E-07
15GO:0006353: DNA-templated transcription, termination3.00E-05
16GO:0042127: regulation of cell proliferation5.43E-05
17GO:1900864: mitochondrial RNA modification1.45E-04
18GO:0048497: maintenance of floral organ identity2.22E-04
19GO:0006364: rRNA processing2.22E-04
20GO:0009793: embryo development ending in seed dormancy2.43E-04
21GO:0009451: RNA modification2.61E-04
22GO:0009913: epidermal cell differentiation3.14E-04
23GO:1903866: palisade mesophyll development5.15E-04
24GO:0010063: positive regulation of trichoblast fate specification5.15E-04
25GO:0090063: positive regulation of microtubule nucleation5.15E-04
26GO:0033206: meiotic cytokinesis5.15E-04
27GO:0034757: negative regulation of iron ion transport5.15E-04
28GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process5.15E-04
29GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic5.15E-04
30GO:0080112: seed growth5.15E-04
31GO:1905039: carboxylic acid transmembrane transport5.15E-04
32GO:1905200: gibberellic acid transmembrane transport5.15E-04
33GO:0006401: RNA catabolic process5.37E-04
34GO:0042255: ribosome assembly6.69E-04
35GO:0007389: pattern specification process8.15E-04
36GO:0010305: leaf vascular tissue pattern formation8.23E-04
37GO:0010541: acropetal auxin transport1.11E-03
38GO:0009662: etioplast organization1.11E-03
39GO:1900033: negative regulation of trichome patterning1.11E-03
40GO:2000071: regulation of defense response by callose deposition1.11E-03
41GO:1904143: positive regulation of carotenoid biosynthetic process1.11E-03
42GO:0080009: mRNA methylation1.11E-03
43GO:1901529: positive regulation of anion channel activity1.11E-03
44GO:0033566: gamma-tubulin complex localization1.11E-03
45GO:1902326: positive regulation of chlorophyll biosynthetic process1.11E-03
46GO:0010569: regulation of double-strand break repair via homologous recombination1.11E-03
47GO:0010271: regulation of chlorophyll catabolic process1.11E-03
48GO:0048731: system development1.11E-03
49GO:1900865: chloroplast RNA modification1.15E-03
50GO:0048829: root cap development1.34E-03
51GO:0006949: syncytium formation1.34E-03
52GO:0009828: plant-type cell wall loosening1.37E-03
53GO:0042780: tRNA 3'-end processing1.81E-03
54GO:0001578: microtubule bundle formation1.81E-03
55GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.81E-03
56GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement1.81E-03
57GO:0080117: secondary growth1.81E-03
58GO:0090391: granum assembly1.81E-03
59GO:0006518: peptide metabolic process1.81E-03
60GO:0010588: cotyledon vascular tissue pattern formation2.01E-03
61GO:0010020: chloroplast fission2.27E-03
62GO:0010371: regulation of gibberellin biosynthetic process2.63E-03
63GO:0010071: root meristem specification2.63E-03
64GO:0010239: chloroplast mRNA processing2.63E-03
65GO:0007276: gamete generation2.63E-03
66GO:0043481: anthocyanin accumulation in tissues in response to UV light2.63E-03
67GO:0010306: rhamnogalacturonan II biosynthetic process2.63E-03
68GO:2000377: regulation of reactive oxygen species metabolic process3.16E-03
69GO:0006808: regulation of nitrogen utilization3.54E-03
70GO:0006479: protein methylation3.54E-03
71GO:0048629: trichome patterning3.54E-03
72GO:0051322: anaphase3.54E-03
73GO:0006221: pyrimidine nucleotide biosynthetic process3.54E-03
74GO:0006021: inositol biosynthetic process3.54E-03
75GO:0003333: amino acid transmembrane transport3.83E-03
76GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.88E-03
77GO:0009734: auxin-activated signaling pathway4.08E-03
78GO:2000022: regulation of jasmonic acid mediated signaling pathway4.20E-03
79GO:0009733: response to auxin4.48E-03
80GO:0016123: xanthophyll biosynthetic process4.54E-03
81GO:0016558: protein import into peroxisome matrix4.54E-03
82GO:0016120: carotene biosynthetic process4.54E-03
83GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.58E-03
84GO:0009643: photosynthetic acclimation5.63E-03
85GO:0006014: D-ribose metabolic process5.63E-03
86GO:0010304: PSII associated light-harvesting complex II catabolic process5.63E-03
87GO:0016554: cytidine to uridine editing5.63E-03
88GO:0060918: auxin transport5.63E-03
89GO:1902456: regulation of stomatal opening5.63E-03
90GO:0048831: regulation of shoot system development5.63E-03
91GO:0010315: auxin efflux5.63E-03
92GO:0003006: developmental process involved in reproduction5.63E-03
93GO:0008033: tRNA processing5.85E-03
94GO:0010501: RNA secondary structure unwinding5.85E-03
95GO:0010087: phloem or xylem histogenesis5.85E-03
96GO:0010118: stomatal movement5.85E-03
97GO:0009664: plant-type cell wall organization6.03E-03
98GO:0009741: response to brassinosteroid6.31E-03
99GO:0032259: methylation6.71E-03
100GO:0009942: longitudinal axis specification6.79E-03
101GO:2000033: regulation of seed dormancy process6.79E-03
102GO:1901259: chloroplast rRNA processing6.79E-03
103GO:0048509: regulation of meristem development6.79E-03
104GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity6.79E-03
105GO:0010310: regulation of hydrogen peroxide metabolic process6.79E-03
106GO:0009955: adaxial/abaxial pattern specification6.79E-03
107GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)6.79E-03
108GO:0048825: cotyledon development7.28E-03
109GO:0080156: mitochondrial mRNA modification7.80E-03
110GO:0010444: guard mother cell differentiation8.04E-03
111GO:0000082: G1/S transition of mitotic cell cycle8.04E-03
112GO:0010103: stomatal complex morphogenesis8.04E-03
113GO:0006955: immune response8.04E-03
114GO:0048437: floral organ development8.04E-03
115GO:0032502: developmental process8.34E-03
116GO:0010583: response to cyclopentenone8.34E-03
117GO:0048367: shoot system development8.53E-03
118GO:0048766: root hair initiation9.36E-03
119GO:0010492: maintenance of shoot apical meristem identity9.36E-03
120GO:0000105: histidine biosynthetic process9.36E-03
121GO:0052543: callose deposition in cell wall9.36E-03
122GO:0009938: negative regulation of gibberellic acid mediated signaling pathway9.36E-03
123GO:0006402: mRNA catabolic process9.36E-03
124GO:0009787: regulation of abscisic acid-activated signaling pathway9.36E-03
125GO:0046620: regulation of organ growth9.36E-03
126GO:0032544: plastid translation1.08E-02
127GO:0009827: plant-type cell wall modification1.08E-02
128GO:0019430: removal of superoxide radicals1.08E-02
129GO:0010233: phloem transport1.08E-02
130GO:0010497: plasmodesmata-mediated intercellular transport1.08E-02
131GO:0010029: regulation of seed germination1.20E-02
132GO:0000373: Group II intron splicing1.22E-02
133GO:0048589: developmental growth1.22E-02
134GO:0000902: cell morphogenesis1.22E-02
135GO:0098656: anion transmembrane transport1.22E-02
136GO:0048507: meristem development1.22E-02
137GO:0006351: transcription, DNA-templated1.23E-02
138GO:0042761: very long-chain fatty acid biosynthetic process1.38E-02
139GO:0006349: regulation of gene expression by genetic imprinting1.38E-02
140GO:0031425: chloroplast RNA processing1.38E-02
141GO:0048481: plant ovule development1.48E-02
142GO:0016441: posttranscriptional gene silencing1.54E-02
143GO:0006259: DNA metabolic process1.54E-02
144GO:0010048: vernalization response1.54E-02
145GO:0006535: cysteine biosynthetic process from serine1.54E-02
146GO:1903507: negative regulation of nucleic acid-templated transcription1.70E-02
147GO:0009750: response to fructose1.70E-02
148GO:0048229: gametophyte development1.70E-02
149GO:0048765: root hair cell differentiation1.70E-02
150GO:0046856: phosphatidylinositol dephosphorylation1.70E-02
151GO:0006265: DNA topological change1.70E-02
152GO:0009089: lysine biosynthetic process via diaminopimelate1.70E-02
153GO:0009682: induced systemic resistance1.70E-02
154GO:0015770: sucrose transport1.70E-02
155GO:0006865: amino acid transport1.80E-02
156GO:0045037: protein import into chloroplast stroma1.88E-02
157GO:0010582: floral meristem determinacy1.88E-02
158GO:0006790: sulfur compound metabolic process1.88E-02
159GO:0012501: programmed cell death1.88E-02
160GO:0009867: jasmonic acid mediated signaling pathway1.88E-02
161GO:0010152: pollen maturation1.88E-02
162GO:0009416: response to light stimulus1.95E-02
163GO:0040008: regulation of growth1.96E-02
164GO:0006355: regulation of transcription, DNA-templated2.05E-02
165GO:0010102: lateral root morphogenesis2.05E-02
166GO:0030001: metal ion transport2.15E-02
167GO:0006270: DNA replication initiation2.24E-02
168GO:0009887: animal organ morphogenesis2.24E-02
169GO:0010540: basipetal auxin transport2.24E-02
170GO:0048467: gynoecium development2.24E-02
171GO:0009739: response to gibberellin2.40E-02
172GO:0046854: phosphatidylinositol phosphorylation2.43E-02
173GO:0009744: response to sucrose2.43E-02
174GO:0080188: RNA-directed DNA methylation2.43E-02
175GO:0009901: anther dehiscence2.43E-02
176GO:0007166: cell surface receptor signaling pathway2.46E-02
177GO:0006468: protein phosphorylation2.54E-02
178GO:0008380: RNA splicing2.60E-02
179GO:0006636: unsaturated fatty acid biosynthetic process2.62E-02
180GO:0010187: negative regulation of seed germination2.83E-02
181GO:0019344: cysteine biosynthetic process2.83E-02
182GO:0000027: ribosomal large subunit assembly2.83E-02
183GO:0080147: root hair cell development2.83E-02
184GO:0009863: salicylic acid mediated signaling pathway2.83E-02
185GO:0031347: regulation of defense response2.95E-02
186GO:0006260: DNA replication2.95E-02
187GO:0010073: meristem maintenance3.03E-02
188GO:0019953: sexual reproduction3.03E-02
189GO:0016998: cell wall macromolecule catabolic process3.24E-02
190GO:0010431: seed maturation3.24E-02
191GO:0009736: cytokinin-activated signaling pathway3.28E-02
192GO:0009826: unidimensional cell growth3.43E-02
193GO:0030245: cellulose catabolic process3.46E-02
194GO:0071215: cellular response to abscisic acid stimulus3.68E-02
195GO:0010082: regulation of root meristem growth3.68E-02
196GO:0048443: stamen development3.90E-02
197GO:0010091: trichome branching3.90E-02
198GO:0070417: cellular response to cold4.13E-02
199GO:0080022: primary root development4.37E-02
200GO:0000226: microtubule cytoskeleton organization4.37E-02
201GO:0042335: cuticle development4.37E-02
202GO:0009740: gibberellic acid mediated signaling pathway4.38E-02
203GO:0048366: leaf development4.39E-02
204GO:0048868: pollen tube development4.61E-02
205GO:0009960: endosperm development4.61E-02
206GO:0009958: positive gravitropism4.61E-02
207GO:0071472: cellular response to salt stress4.61E-02
208GO:0009624: response to nematode4.65E-02
209GO:0006396: RNA processing4.79E-02
210GO:0007018: microtubule-based movement4.85E-02
211GO:0007059: chromosome segregation4.85E-02
212GO:0009646: response to absence of light4.85E-02
213GO:0051726: regulation of cell cycle4.92E-02
RankGO TermAdjusted P value
1GO:0052834: inositol monophosphate phosphatase activity0.00E+00
2GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity0.00E+00
3GO:0016763: transferase activity, transferring pentosyl groups0.00E+00
4GO:0008859: exoribonuclease II activity0.00E+00
5GO:0071633: dihydroceramidase activity0.00E+00
6GO:0004401: histidinol-phosphatase activity0.00E+00
7GO:0003723: RNA binding1.04E-06
8GO:0019843: rRNA binding1.18E-04
9GO:0004519: endonuclease activity1.75E-04
10GO:0034335: DNA supercoiling activity5.15E-04
11GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor5.15E-04
12GO:0004654: polyribonucleotide nucleotidyltransferase activity5.15E-04
13GO:0010347: L-galactose-1-phosphate phosphatase activity5.15E-04
14GO:0004016: adenylate cyclase activity5.15E-04
15GO:1905201: gibberellin transmembrane transporter activity5.15E-04
16GO:0008836: diaminopimelate decarboxylase activity5.15E-04
17GO:0042834: peptidoglycan binding5.15E-04
18GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity5.15E-04
19GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity5.15E-04
20GO:0016274: protein-arginine N-methyltransferase activity5.15E-04
21GO:0008168: methyltransferase activity5.75E-04
22GO:0003727: single-stranded RNA binding6.11E-04
23GO:0008173: RNA methyltransferase activity8.15E-04
24GO:0009884: cytokinin receptor activity1.11E-03
25GO:0042389: omega-3 fatty acid desaturase activity1.11E-03
26GO:0004809: tRNA (guanine-N2-)-methyltransferase activity1.11E-03
27GO:0052832: inositol monophosphate 3-phosphatase activity1.11E-03
28GO:0008934: inositol monophosphate 1-phosphatase activity1.11E-03
29GO:0052833: inositol monophosphate 4-phosphatase activity1.11E-03
30GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity1.11E-03
31GO:0016805: dipeptidase activity1.81E-03
32GO:0005034: osmosensor activity1.81E-03
33GO:0017150: tRNA dihydrouridine synthase activity1.81E-03
34GO:0042781: 3'-tRNA processing endoribonuclease activity1.81E-03
35GO:0000175: 3'-5'-exoribonuclease activity2.01E-03
36GO:0003916: DNA topoisomerase activity2.63E-03
37GO:0001872: (1->3)-beta-D-glucan binding2.63E-03
38GO:0009041: uridylate kinase activity2.63E-03
39GO:0003697: single-stranded DNA binding3.26E-03
40GO:0043565: sequence-specific DNA binding3.49E-03
41GO:0010011: auxin binding3.54E-03
42GO:0010328: auxin influx transmembrane transporter activity3.54E-03
43GO:0008289: lipid binding3.98E-03
44GO:0030570: pectate lyase activity4.58E-03
45GO:0003688: DNA replication origin binding5.63E-03
46GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity5.63E-03
47GO:0004784: superoxide dismutase activity5.63E-03
48GO:0003700: transcription factor activity, sequence-specific DNA binding6.56E-03
49GO:0019900: kinase binding6.79E-03
50GO:0004124: cysteine synthase activity6.79E-03
51GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity6.79E-03
52GO:0004747: ribokinase activity6.79E-03
53GO:0003690: double-stranded DNA binding6.90E-03
54GO:0019901: protein kinase binding7.28E-03
55GO:0003677: DNA binding8.45E-03
56GO:0008865: fructokinase activity9.36E-03
57GO:0008237: metallopeptidase activity1.01E-02
58GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1.08E-02
59GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.08E-02
60GO:0003724: RNA helicase activity1.08E-02
61GO:0008026: ATP-dependent helicase activity1.12E-02
62GO:0000989: transcription factor activity, transcription factor binding1.22E-02
63GO:0004004: ATP-dependent RNA helicase activity1.34E-02
64GO:0009672: auxin:proton symporter activity1.38E-02
65GO:0004673: protein histidine kinase activity1.54E-02
66GO:0016887: ATPase activity1.55E-02
67GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.63E-02
68GO:0004222: metalloendopeptidase activity1.64E-02
69GO:0008515: sucrose transmembrane transporter activity1.70E-02
70GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity1.88E-02
71GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.91E-02
72GO:0005524: ATP binding1.95E-02
73GO:0005315: inorganic phosphate transmembrane transporter activity2.05E-02
74GO:0031072: heat shock protein binding2.05E-02
75GO:0000155: phosphorelay sensor kinase activity2.05E-02
76GO:0009982: pseudouridine synthase activity2.05E-02
77GO:0003725: double-stranded RNA binding2.05E-02
78GO:0010329: auxin efflux transmembrane transporter activity2.05E-02
79GO:0004672: protein kinase activity2.12E-02
80GO:0005515: protein binding2.18E-02
81GO:0051119: sugar transmembrane transporter activity2.43E-02
82GO:0004190: aspartic-type endopeptidase activity2.43E-02
83GO:0015293: symporter activity2.74E-02
84GO:0003714: transcription corepressor activity2.83E-02
85GO:0005215: transporter activity3.02E-02
86GO:0043424: protein histidine kinase binding3.03E-02
87GO:0015079: potassium ion transmembrane transporter activity3.03E-02
88GO:0004674: protein serine/threonine kinase activity3.04E-02
89GO:0004540: ribonuclease activity3.24E-02
90GO:0004176: ATP-dependent peptidase activity3.24E-02
91GO:0003777: microtubule motor activity3.63E-02
92GO:0015171: amino acid transmembrane transporter activity3.63E-02
93GO:0016788: hydrolase activity, acting on ester bonds3.68E-02
94GO:0008810: cellulase activity3.68E-02
95GO:0008514: organic anion transmembrane transporter activity3.90E-02
96GO:0018024: histone-lysine N-methyltransferase activity4.13E-02
97GO:0005102: receptor binding4.13E-02
98GO:0003779: actin binding4.52E-02
99GO:0003713: transcription coactivator activity4.61E-02
100GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity4.61E-02
101GO:0001085: RNA polymerase II transcription factor binding4.61E-02
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Gene type



Gene DE type