Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G09560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
2GO:0010273: detoxification of copper ion0.00E+00
3GO:0006858: extracellular transport0.00E+00
4GO:0002764: immune response-regulating signaling pathway0.00E+00
5GO:0051553: flavone biosynthetic process0.00E+00
6GO:0010398: xylogalacturonan metabolic process0.00E+00
7GO:0009636: response to toxic substance1.22E-04
8GO:0099132: ATP hydrolysis coupled cation transmembrane transport2.16E-04
9GO:1901430: positive regulation of syringal lignin biosynthetic process2.16E-04
10GO:0034214: protein hexamerization2.16E-04
11GO:0010045: response to nickel cation2.16E-04
12GO:0032491: detection of molecule of fungal origin2.16E-04
13GO:0060862: negative regulation of floral organ abscission2.16E-04
14GO:0019605: butyrate metabolic process2.16E-04
15GO:0006083: acetate metabolic process2.16E-04
16GO:1990542: mitochondrial transmembrane transport2.16E-04
17GO:1902600: hydrogen ion transmembrane transport2.16E-04
18GO:0048508: embryonic meristem development2.16E-04
19GO:0010204: defense response signaling pathway, resistance gene-independent2.29E-04
20GO:0006032: chitin catabolic process3.88E-04
21GO:0019374: galactolipid metabolic process4.81E-04
22GO:0002240: response to molecule of oomycetes origin4.81E-04
23GO:0031349: positive regulation of defense response4.81E-04
24GO:1901703: protein localization involved in auxin polar transport4.81E-04
25GO:0009945: radial axis specification4.81E-04
26GO:0010115: regulation of abscisic acid biosynthetic process4.81E-04
27GO:0010042: response to manganese ion4.81E-04
28GO:0010271: regulation of chlorophyll catabolic process4.81E-04
29GO:0042814: monopolar cell growth4.81E-04
30GO:0010155: regulation of proton transport4.81E-04
31GO:0002230: positive regulation of defense response to virus by host7.83E-04
32GO:0080163: regulation of protein serine/threonine phosphatase activity7.83E-04
33GO:0016045: detection of bacterium7.83E-04
34GO:0010359: regulation of anion channel activity7.83E-04
35GO:0010288: response to lead ion7.83E-04
36GO:0072661: protein targeting to plasma membrane7.83E-04
37GO:0016998: cell wall macromolecule catabolic process1.09E-03
38GO:0002239: response to oomycetes1.12E-03
39GO:0030100: regulation of endocytosis1.12E-03
40GO:1902290: positive regulation of defense response to oomycetes1.12E-03
41GO:0046513: ceramide biosynthetic process1.12E-03
42GO:0006952: defense response1.26E-03
43GO:0009809: lignin biosynthetic process1.29E-03
44GO:0006012: galactose metabolic process1.29E-03
45GO:0033358: UDP-L-arabinose biosynthetic process1.48E-03
46GO:0006621: protein retention in ER lumen1.48E-03
47GO:0000919: cell plate assembly1.48E-03
48GO:0006878: cellular copper ion homeostasis1.48E-03
49GO:0010222: stem vascular tissue pattern formation1.48E-03
50GO:0045227: capsule polysaccharide biosynthetic process1.48E-03
51GO:0009620: response to fungus1.79E-03
52GO:0030308: negative regulation of cell growth1.89E-03
53GO:0009164: nucleoside catabolic process1.89E-03
54GO:0000304: response to singlet oxygen1.89E-03
55GO:0097428: protein maturation by iron-sulfur cluster transfer1.89E-03
56GO:0006097: glyoxylate cycle1.89E-03
57GO:0018344: protein geranylgeranylation1.89E-03
58GO:0006979: response to oxidative stress2.03E-03
59GO:0009920: cell plate formation involved in plant-type cell wall biogenesis2.33E-03
60GO:0060918: auxin transport2.33E-03
61GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione2.33E-03
62GO:0002238: response to molecule of fungal origin2.33E-03
63GO:0010942: positive regulation of cell death2.33E-03
64GO:0006694: steroid biosynthetic process2.80E-03
65GO:0009942: longitudinal axis specification2.80E-03
66GO:0001666: response to hypoxia3.12E-03
67GO:0050829: defense response to Gram-negative bacterium3.30E-03
68GO:1900057: positive regulation of leaf senescence3.30E-03
69GO:0010038: response to metal ion3.30E-03
70GO:1900150: regulation of defense response to fungus3.82E-03
71GO:0016559: peroxisome fission3.82E-03
72GO:0006644: phospholipid metabolic process3.82E-03
73GO:0008152: metabolic process3.97E-03
74GO:0022900: electron transport chain4.38E-03
75GO:0009407: toxin catabolic process4.48E-03
76GO:0007568: aging4.69E-03
77GO:0009051: pentose-phosphate shunt, oxidative branch4.95E-03
78GO:0090333: regulation of stomatal closure4.95E-03
79GO:0007338: single fertilization4.95E-03
80GO:0030042: actin filament depolymerization5.56E-03
81GO:0048354: mucilage biosynthetic process involved in seed coat development5.56E-03
82GO:0010380: regulation of chlorophyll biosynthetic process5.56E-03
83GO:0008202: steroid metabolic process5.56E-03
84GO:1900426: positive regulation of defense response to bacterium5.56E-03
85GO:0050832: defense response to fungus5.95E-03
86GO:0006887: exocytosis6.11E-03
87GO:0006897: endocytosis6.11E-03
88GO:0019538: protein metabolic process6.18E-03
89GO:0010215: cellulose microfibril organization6.18E-03
90GO:0030148: sphingolipid biosynthetic process6.84E-03
91GO:0045037: protein import into chloroplast stroma7.51E-03
92GO:0071365: cellular response to auxin stimulus7.51E-03
93GO:0000266: mitochondrial fission7.51E-03
94GO:0010102: lateral root morphogenesis8.22E-03
95GO:0006006: glucose metabolic process8.22E-03
96GO:0034605: cellular response to heat8.94E-03
97GO:0002237: response to molecule of bacterial origin8.94E-03
98GO:0006813: potassium ion transport8.94E-03
99GO:0010540: basipetal auxin transport8.94E-03
100GO:0046688: response to copper ion9.69E-03
101GO:0070588: calcium ion transmembrane transport9.69E-03
102GO:0009225: nucleotide-sugar metabolic process9.69E-03
103GO:0034976: response to endoplasmic reticulum stress1.05E-02
104GO:0009863: salicylic acid mediated signaling pathway1.12E-02
105GO:0005992: trehalose biosynthetic process1.12E-02
106GO:0045454: cell redox homeostasis1.16E-02
107GO:0010073: meristem maintenance1.21E-02
108GO:0006825: copper ion transport1.21E-02
109GO:0009269: response to desiccation1.29E-02
110GO:0006869: lipid transport1.30E-02
111GO:0007005: mitochondrion organization1.37E-02
112GO:0071456: cellular response to hypoxia1.37E-02
113GO:0030245: cellulose catabolic process1.37E-02
114GO:0016042: lipid catabolic process1.46E-02
115GO:0010584: pollen exine formation1.55E-02
116GO:0010089: xylem development1.55E-02
117GO:0070417: cellular response to cold1.64E-02
118GO:0009058: biosynthetic process1.69E-02
119GO:0000413: protein peptidyl-prolyl isomerization1.74E-02
120GO:0042744: hydrogen peroxide catabolic process1.82E-02
121GO:0045489: pectin biosynthetic process1.83E-02
122GO:0071472: cellular response to salt stress1.83E-02
123GO:0006885: regulation of pH1.83E-02
124GO:0071554: cell wall organization or biogenesis2.12E-02
125GO:0002229: defense response to oomycetes2.12E-02
126GO:0010150: leaf senescence2.21E-02
127GO:0032502: developmental process2.23E-02
128GO:0009630: gravitropism2.23E-02
129GO:0030163: protein catabolic process2.33E-02
130GO:0006464: cellular protein modification process2.44E-02
131GO:0009567: double fertilization forming a zygote and endosperm2.44E-02
132GO:0006470: protein dephosphorylation2.53E-02
133GO:0071805: potassium ion transmembrane transport2.54E-02
134GO:0006904: vesicle docking involved in exocytosis2.54E-02
135GO:0009617: response to bacterium2.64E-02
136GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.87E-02
137GO:0055114: oxidation-reduction process2.97E-02
138GO:0006906: vesicle fusion2.99E-02
139GO:0006974: cellular response to DNA damage stimulus2.99E-02
140GO:0006950: response to stress3.10E-02
141GO:0016311: dephosphorylation3.22E-02
142GO:0016049: cell growth3.22E-02
143GO:0009813: flavonoid biosynthetic process3.46E-02
144GO:0010043: response to zinc ion3.70E-02
145GO:0009853: photorespiration3.95E-02
146GO:0016051: carbohydrate biosynthetic process3.95E-02
147GO:0055085: transmembrane transport4.17E-02
148GO:0006457: protein folding4.27E-02
149GO:0006839: mitochondrial transport4.33E-02
150GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.38E-02
151GO:0010114: response to red light4.73E-02
152GO:0051707: response to other organism4.73E-02
RankGO TermAdjusted P value
1GO:0010290: chlorophyll catabolite transmembrane transporter activity0.00E+00
2GO:0015431: glutathione S-conjugate-exporting ATPase activity0.00E+00
3GO:0005212: structural constituent of eye lens0.00E+00
4GO:1990482: sphingolipid alpha-glucuronosyltransferase activity0.00E+00
5GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
6GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
7GO:0033759: flavone synthase activity0.00E+00
8GO:0005496: steroid binding5.37E-05
9GO:0003978: UDP-glucose 4-epimerase activity1.10E-04
10GO:0004714: transmembrane receptor protein tyrosine kinase activity1.85E-04
11GO:0004662: CAAX-protein geranylgeranyltransferase activity2.16E-04
12GO:0047760: butyrate-CoA ligase activity2.16E-04
13GO:0004649: poly(ADP-ribose) glycohydrolase activity2.16E-04
14GO:0003987: acetate-CoA ligase activity2.16E-04
15GO:0015927: trehalase activity2.16E-04
16GO:0080044: quercetin 7-O-glucosyltransferase activity2.60E-04
17GO:0080043: quercetin 3-O-glucosyltransferase activity2.60E-04
18GO:0015020: glucuronosyltransferase activity3.88E-04
19GO:0004568: chitinase activity3.88E-04
20GO:0016758: transferase activity, transferring hexosyl groups4.14E-04
21GO:0022821: potassium ion antiporter activity4.81E-04
22GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity4.81E-04
23GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity4.81E-04
24GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity4.81E-04
25GO:0032934: sterol binding4.81E-04
26GO:0050736: O-malonyltransferase activity4.81E-04
27GO:0045140: inositol phosphoceramide synthase activity4.81E-04
28GO:0032791: lead ion binding4.81E-04
29GO:0052739: phosphatidylserine 1-acylhydrolase activity4.81E-04
30GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity4.81E-04
31GO:0005388: calcium-transporting ATPase activity5.83E-04
32GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity7.83E-04
33GO:0003955: NAD(P)H dehydrogenase (quinone) activity7.83E-04
34GO:0016595: glutamate binding7.83E-04
35GO:0008194: UDP-glycosyltransferase activity8.39E-04
36GO:0004416: hydroxyacylglutathione hydrolase activity1.12E-03
37GO:0022890: inorganic cation transmembrane transporter activity1.12E-03
38GO:0017077: oxidative phosphorylation uncoupler activity1.12E-03
39GO:0046923: ER retention sequence binding1.48E-03
40GO:0019199: transmembrane receptor protein kinase activity1.48E-03
41GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.48E-03
42GO:0000062: fatty-acyl-CoA binding1.48E-03
43GO:0050373: UDP-arabinose 4-epimerase activity1.48E-03
44GO:0004737: pyruvate decarboxylase activity1.48E-03
45GO:0004345: glucose-6-phosphate dehydrogenase activity1.48E-03
46GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.48E-03
47GO:0008374: O-acyltransferase activity1.89E-03
48GO:0015299: solute:proton antiporter activity1.89E-03
49GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.89E-03
50GO:0016208: AMP binding2.33E-03
51GO:0035252: UDP-xylosyltransferase activity2.33E-03
52GO:0030976: thiamine pyrophosphate binding2.33E-03
53GO:0051920: peroxiredoxin activity2.80E-03
54GO:0004620: phospholipase activity3.30E-03
55GO:0016831: carboxy-lyase activity3.30E-03
56GO:0004033: aldo-keto reductase (NADP) activity3.82E-03
57GO:0052747: sinapyl alcohol dehydrogenase activity3.82E-03
58GO:0016209: antioxidant activity3.82E-03
59GO:0008970: phosphatidylcholine 1-acylhydrolase activity4.38E-03
60GO:0008142: oxysterol binding4.38E-03
61GO:0071949: FAD binding4.95E-03
62GO:0004743: pyruvate kinase activity5.56E-03
63GO:0047617: acyl-CoA hydrolase activity5.56E-03
64GO:0030955: potassium ion binding5.56E-03
65GO:0004864: protein phosphatase inhibitor activity6.18E-03
66GO:0004713: protein tyrosine kinase activity6.18E-03
67GO:0004805: trehalose-phosphatase activity6.18E-03
68GO:0008171: O-methyltransferase activity6.18E-03
69GO:0004364: glutathione transferase activity6.37E-03
70GO:0015386: potassium:proton antiporter activity6.84E-03
71GO:0008794: arsenate reductase (glutaredoxin) activity6.84E-03
72GO:0008559: xenobiotic-transporting ATPase activity6.84E-03
73GO:0004601: peroxidase activity7.01E-03
74GO:0045551: cinnamyl-alcohol dehydrogenase activity7.51E-03
75GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.22E-03
76GO:0004022: alcohol dehydrogenase (NAD) activity8.22E-03
77GO:0004190: aspartic-type endopeptidase activity9.69E-03
78GO:0004725: protein tyrosine phosphatase activity1.05E-02
79GO:0051536: iron-sulfur cluster binding1.12E-02
80GO:0015079: potassium ion transmembrane transporter activity1.21E-02
81GO:0035251: UDP-glucosyltransferase activity1.29E-02
82GO:0008810: cellulase activity1.46E-02
83GO:0003756: protein disulfide isomerase activity1.55E-02
84GO:0005451: monovalent cation:proton antiporter activity1.74E-02
85GO:0010181: FMN binding1.93E-02
86GO:0050662: coenzyme binding1.93E-02
87GO:0004872: receptor activity2.02E-02
88GO:0015385: sodium:proton antiporter activity2.33E-02
89GO:0016791: phosphatase activity2.44E-02
90GO:0016301: kinase activity2.44E-02
91GO:0016722: oxidoreductase activity, oxidizing metal ions2.54E-02
92GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.54E-02
93GO:0016887: ATPase activity2.63E-02
94GO:0016413: O-acetyltransferase activity2.65E-02
95GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.81E-02
96GO:0008375: acetylglucosaminyltransferase activity2.99E-02
97GO:0004806: triglyceride lipase activity3.10E-02
98GO:0004721: phosphoprotein phosphatase activity3.10E-02
99GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.22E-02
100GO:0000287: magnesium ion binding3.36E-02
101GO:0015238: drug transmembrane transporter activity3.46E-02
102GO:0043531: ADP binding3.75E-02
103GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.95E-02
104GO:0000149: SNARE binding4.20E-02
105GO:0050661: NADP binding4.33E-02
106GO:0005484: SNAP receptor activity4.73E-02
107GO:0005507: copper ion binding4.80E-02
108GO:0051537: 2 iron, 2 sulfur cluster binding5.00E-02
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Gene type



Gene DE type