GO Enrichment Analysis of Co-expressed Genes with
AT1G09440
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 2 | GO:0009606: tropism | 0.00E+00 |
| 3 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 4 | GO:0071311: cellular response to acetate | 0.00E+00 |
| 5 | GO:0015843: methylammonium transport | 0.00E+00 |
| 6 | GO:0031222: arabinan catabolic process | 0.00E+00 |
| 7 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 8 | GO:0071260: cellular response to mechanical stimulus | 0.00E+00 |
| 9 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 10 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 11 | GO:0009157: deoxyribonucleoside monophosphate biosynthetic process | 0.00E+00 |
| 12 | GO:0009734: auxin-activated signaling pathway | 1.50E-10 |
| 13 | GO:0009733: response to auxin | 3.11E-09 |
| 14 | GO:0046620: regulation of organ growth | 4.04E-09 |
| 15 | GO:0040008: regulation of growth | 1.41E-08 |
| 16 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.51E-06 |
| 17 | GO:0009926: auxin polar transport | 8.85E-06 |
| 18 | GO:0000373: Group II intron splicing | 4.95E-05 |
| 19 | GO:0032502: developmental process | 1.20E-04 |
| 20 | GO:1902265: abscisic acid homeostasis | 4.84E-04 |
| 21 | GO:0051418: microtubule nucleation by microtubule organizing center | 4.84E-04 |
| 22 | GO:0010480: microsporocyte differentiation | 4.84E-04 |
| 23 | GO:0045488: pectin metabolic process | 4.84E-04 |
| 24 | GO:0034080: CENP-A containing nucleosome assembly | 4.84E-04 |
| 25 | GO:0000066: mitochondrial ornithine transport | 4.84E-04 |
| 26 | GO:0009658: chloroplast organization | 5.14E-04 |
| 27 | GO:0042255: ribosome assembly | 6.11E-04 |
| 28 | GO:0007389: pattern specification process | 7.45E-04 |
| 29 | GO:1900871: chloroplast mRNA modification | 1.04E-03 |
| 30 | GO:0070981: L-asparagine biosynthetic process | 1.04E-03 |
| 31 | GO:0071497: cellular response to freezing | 1.04E-03 |
| 32 | GO:0009786: regulation of asymmetric cell division | 1.04E-03 |
| 33 | GO:0006529: asparagine biosynthetic process | 1.04E-03 |
| 34 | GO:2000123: positive regulation of stomatal complex development | 1.04E-03 |
| 35 | GO:0033566: gamma-tubulin complex localization | 1.04E-03 |
| 36 | GO:0009638: phototropism | 1.05E-03 |
| 37 | GO:0010252: auxin homeostasis | 1.21E-03 |
| 38 | GO:0006816: calcium ion transport | 1.41E-03 |
| 39 | GO:0071230: cellular response to amino acid stimulus | 1.70E-03 |
| 40 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 1.70E-03 |
| 41 | GO:0051604: protein maturation | 1.70E-03 |
| 42 | GO:0016050: vesicle organization | 1.70E-03 |
| 43 | GO:0071398: cellular response to fatty acid | 1.70E-03 |
| 44 | GO:0007052: mitotic spindle organization | 1.70E-03 |
| 45 | GO:0031022: nuclear migration along microfilament | 1.70E-03 |
| 46 | GO:0051127: positive regulation of actin nucleation | 1.70E-03 |
| 47 | GO:0009767: photosynthetic electron transport chain | 1.84E-03 |
| 48 | GO:2000012: regulation of auxin polar transport | 1.84E-03 |
| 49 | GO:0009742: brassinosteroid mediated signaling pathway | 2.05E-03 |
| 50 | GO:0015696: ammonium transport | 2.47E-03 |
| 51 | GO:0046739: transport of virus in multicellular host | 2.47E-03 |
| 52 | GO:0032981: mitochondrial respiratory chain complex I assembly | 2.47E-03 |
| 53 | GO:2000904: regulation of starch metabolic process | 2.47E-03 |
| 54 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 2.47E-03 |
| 55 | GO:0043572: plastid fission | 2.47E-03 |
| 56 | GO:0034508: centromere complex assembly | 2.47E-03 |
| 57 | GO:0051513: regulation of monopolar cell growth | 2.47E-03 |
| 58 | GO:0007231: osmosensory signaling pathway | 2.47E-03 |
| 59 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 2.47E-03 |
| 60 | GO:0051639: actin filament network formation | 2.47E-03 |
| 61 | GO:0044211: CTP salvage | 2.47E-03 |
| 62 | GO:0090307: mitotic spindle assembly | 2.47E-03 |
| 63 | GO:0005992: trehalose biosynthetic process | 2.88E-03 |
| 64 | GO:0033500: carbohydrate homeostasis | 3.32E-03 |
| 65 | GO:2000038: regulation of stomatal complex development | 3.32E-03 |
| 66 | GO:0044206: UMP salvage | 3.32E-03 |
| 67 | GO:0009902: chloroplast relocation | 3.32E-03 |
| 68 | GO:0009165: nucleotide biosynthetic process | 3.32E-03 |
| 69 | GO:1901141: regulation of lignin biosynthetic process | 3.32E-03 |
| 70 | GO:0051764: actin crosslink formation | 3.32E-03 |
| 71 | GO:0072488: ammonium transmembrane transport | 3.32E-03 |
| 72 | GO:0022622: root system development | 3.32E-03 |
| 73 | GO:0006839: mitochondrial transport | 3.42E-03 |
| 74 | GO:0010082: regulation of root meristem growth | 4.17E-03 |
| 75 | GO:0006544: glycine metabolic process | 4.26E-03 |
| 76 | GO:1902183: regulation of shoot apical meristem development | 4.26E-03 |
| 77 | GO:0016123: xanthophyll biosynthetic process | 4.26E-03 |
| 78 | GO:0010438: cellular response to sulfur starvation | 4.26E-03 |
| 79 | GO:0010158: abaxial cell fate specification | 4.26E-03 |
| 80 | GO:0032876: negative regulation of DNA endoreduplication | 4.26E-03 |
| 81 | GO:0010375: stomatal complex patterning | 4.26E-03 |
| 82 | GO:0006468: protein phosphorylation | 4.58E-03 |
| 83 | GO:0006655: phosphatidylglycerol biosynthetic process | 5.27E-03 |
| 84 | GO:0006139: nucleobase-containing compound metabolic process | 5.27E-03 |
| 85 | GO:0010315: auxin efflux | 5.27E-03 |
| 86 | GO:0006206: pyrimidine nucleobase metabolic process | 5.27E-03 |
| 87 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 5.27E-03 |
| 88 | GO:0006563: L-serine metabolic process | 5.27E-03 |
| 89 | GO:0010405: arabinogalactan protein metabolic process | 5.27E-03 |
| 90 | GO:0009959: negative gravitropism | 5.27E-03 |
| 91 | GO:0007275: multicellular organism development | 5.32E-03 |
| 92 | GO:0009958: positive gravitropism | 5.74E-03 |
| 93 | GO:2000033: regulation of seed dormancy process | 6.36E-03 |
| 94 | GO:0009903: chloroplast avoidance movement | 6.36E-03 |
| 95 | GO:0030488: tRNA methylation | 6.36E-03 |
| 96 | GO:0080086: stamen filament development | 6.36E-03 |
| 97 | GO:0050829: defense response to Gram-negative bacterium | 7.52E-03 |
| 98 | GO:0030307: positive regulation of cell growth | 7.52E-03 |
| 99 | GO:0032880: regulation of protein localization | 7.52E-03 |
| 100 | GO:0010161: red light signaling pathway | 7.52E-03 |
| 101 | GO:0009610: response to symbiotic fungus | 7.52E-03 |
| 102 | GO:0010050: vegetative phase change | 7.52E-03 |
| 103 | GO:0048437: floral organ development | 7.52E-03 |
| 104 | GO:0009740: gibberellic acid mediated signaling pathway | 8.52E-03 |
| 105 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 8.76E-03 |
| 106 | GO:0010439: regulation of glucosinolate biosynthetic process | 8.76E-03 |
| 107 | GO:0009850: auxin metabolic process | 8.76E-03 |
| 108 | GO:0006353: DNA-templated transcription, termination | 8.76E-03 |
| 109 | GO:0048766: root hair initiation | 8.76E-03 |
| 110 | GO:0070413: trehalose metabolism in response to stress | 8.76E-03 |
| 111 | GO:0009704: de-etiolation | 8.76E-03 |
| 112 | GO:0032875: regulation of DNA endoreduplication | 8.76E-03 |
| 113 | GO:0030154: cell differentiation | 9.23E-03 |
| 114 | GO:0016310: phosphorylation | 9.26E-03 |
| 115 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.01E-02 |
| 116 | GO:0010100: negative regulation of photomorphogenesis | 1.01E-02 |
| 117 | GO:0010099: regulation of photomorphogenesis | 1.01E-02 |
| 118 | GO:0006002: fructose 6-phosphate metabolic process | 1.01E-02 |
| 119 | GO:0009827: plant-type cell wall modification | 1.01E-02 |
| 120 | GO:0010029: regulation of seed germination | 1.09E-02 |
| 121 | GO:2000024: regulation of leaf development | 1.14E-02 |
| 122 | GO:0006783: heme biosynthetic process | 1.14E-02 |
| 123 | GO:0000902: cell morphogenesis | 1.14E-02 |
| 124 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.14E-02 |
| 125 | GO:0080167: response to karrikin | 1.17E-02 |
| 126 | GO:1900865: chloroplast RNA modification | 1.29E-02 |
| 127 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.29E-02 |
| 128 | GO:0031425: chloroplast RNA processing | 1.29E-02 |
| 129 | GO:0035999: tetrahydrofolate interconversion | 1.29E-02 |
| 130 | GO:0009299: mRNA transcription | 1.44E-02 |
| 131 | GO:0006535: cysteine biosynthetic process from serine | 1.44E-02 |
| 132 | GO:0048829: root cap development | 1.44E-02 |
| 133 | GO:0009641: shade avoidance | 1.44E-02 |
| 134 | GO:0010162: seed dormancy process | 1.44E-02 |
| 135 | GO:0009773: photosynthetic electron transport in photosystem I | 1.59E-02 |
| 136 | GO:0009682: induced systemic resistance | 1.59E-02 |
| 137 | GO:0006415: translational termination | 1.59E-02 |
| 138 | GO:0048229: gametophyte development | 1.59E-02 |
| 139 | GO:0010015: root morphogenesis | 1.59E-02 |
| 140 | GO:0009416: response to light stimulus | 1.66E-02 |
| 141 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.75E-02 |
| 142 | GO:0010582: floral meristem determinacy | 1.75E-02 |
| 143 | GO:0007623: circadian rhythm | 1.85E-02 |
| 144 | GO:0045490: pectin catabolic process | 1.85E-02 |
| 145 | GO:0030048: actin filament-based movement | 1.92E-02 |
| 146 | GO:0009785: blue light signaling pathway | 1.92E-02 |
| 147 | GO:0010628: positive regulation of gene expression | 1.92E-02 |
| 148 | GO:0006006: glucose metabolic process | 1.92E-02 |
| 149 | GO:0030036: actin cytoskeleton organization | 1.92E-02 |
| 150 | GO:0010075: regulation of meristem growth | 1.92E-02 |
| 151 | GO:0009725: response to hormone | 1.92E-02 |
| 152 | GO:0006541: glutamine metabolic process | 2.09E-02 |
| 153 | GO:0010020: chloroplast fission | 2.09E-02 |
| 154 | GO:0010207: photosystem II assembly | 2.09E-02 |
| 155 | GO:0071555: cell wall organization | 2.09E-02 |
| 156 | GO:0009934: regulation of meristem structural organization | 2.09E-02 |
| 157 | GO:0090351: seedling development | 2.27E-02 |
| 158 | GO:0010030: positive regulation of seed germination | 2.27E-02 |
| 159 | GO:0070588: calcium ion transmembrane transport | 2.27E-02 |
| 160 | GO:0008380: RNA splicing | 2.31E-02 |
| 161 | GO:0010025: wax biosynthetic process | 2.45E-02 |
| 162 | GO:0006071: glycerol metabolic process | 2.45E-02 |
| 163 | GO:0006855: drug transmembrane transport | 2.58E-02 |
| 164 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.64E-02 |
| 165 | GO:0030150: protein import into mitochondrial matrix | 2.64E-02 |
| 166 | GO:0010187: negative regulation of seed germination | 2.64E-02 |
| 167 | GO:0051017: actin filament bundle assembly | 2.64E-02 |
| 168 | GO:0019344: cysteine biosynthetic process | 2.64E-02 |
| 169 | GO:0006825: copper ion transport | 2.83E-02 |
| 170 | GO:0006874: cellular calcium ion homeostasis | 2.83E-02 |
| 171 | GO:0006730: one-carbon metabolic process | 3.23E-02 |
| 172 | GO:0031348: negative regulation of defense response | 3.23E-02 |
| 173 | GO:0009693: ethylene biosynthetic process | 3.44E-02 |
| 174 | GO:0009686: gibberellin biosynthetic process | 3.44E-02 |
| 175 | GO:0009625: response to insect | 3.44E-02 |
| 176 | GO:0010091: trichome branching | 3.65E-02 |
| 177 | GO:0006284: base-excision repair | 3.65E-02 |
| 178 | GO:0019722: calcium-mediated signaling | 3.65E-02 |
| 179 | GO:0070417: cellular response to cold | 3.86E-02 |
| 180 | GO:0008284: positive regulation of cell proliferation | 3.86E-02 |
| 181 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.86E-02 |
| 182 | GO:0000271: polysaccharide biosynthetic process | 4.08E-02 |
| 183 | GO:0008033: tRNA processing | 4.08E-02 |
| 184 | GO:0034220: ion transmembrane transport | 4.08E-02 |
| 185 | GO:0010087: phloem or xylem histogenesis | 4.08E-02 |
| 186 | GO:0048653: anther development | 4.08E-02 |
| 187 | GO:0042631: cellular response to water deprivation | 4.08E-02 |
| 188 | GO:0000226: microtubule cytoskeleton organization | 4.08E-02 |
| 189 | GO:0009624: response to nematode | 4.24E-02 |
| 190 | GO:0045489: pectin biosynthetic process | 4.31E-02 |
| 191 | GO:0010182: sugar mediated signaling pathway | 4.31E-02 |
| 192 | GO:0009741: response to brassinosteroid | 4.31E-02 |
| 193 | GO:0009646: response to absence of light | 4.54E-02 |
| 194 | GO:0008654: phospholipid biosynthetic process | 4.77E-02 |
| 195 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 5.00E-02 |
| 196 | GO:0071554: cell wall organization or biogenesis | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015276: ligand-gated ion channel activity | 0.00E+00 |
| 2 | GO:0019136: deoxynucleoside kinase activity | 0.00E+00 |
| 3 | GO:0008066: glutamate receptor activity | 4.84E-04 |
| 4 | GO:0005290: L-histidine transmembrane transporter activity | 4.84E-04 |
| 5 | GO:0004008: copper-exporting ATPase activity | 4.84E-04 |
| 6 | GO:0004071: aspartate-ammonia ligase activity | 4.84E-04 |
| 7 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 4.84E-04 |
| 8 | GO:0010313: phytochrome binding | 4.84E-04 |
| 9 | GO:0050139: nicotinate-N-glucosyltransferase activity | 4.84E-04 |
| 10 | GO:0003727: single-stranded RNA binding | 5.43E-04 |
| 11 | GO:0000064: L-ornithine transmembrane transporter activity | 1.04E-03 |
| 12 | GO:0015929: hexosaminidase activity | 1.04E-03 |
| 13 | GO:0004563: beta-N-acetylhexosaminidase activity | 1.04E-03 |
| 14 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 1.04E-03 |
| 15 | GO:0050017: L-3-cyanoalanine synthase activity | 1.04E-03 |
| 16 | GO:0017118: lipoyltransferase activity | 1.04E-03 |
| 17 | GO:0043425: bHLH transcription factor binding | 1.04E-03 |
| 18 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 1.04E-03 |
| 19 | GO:0009672: auxin:proton symporter activity | 1.05E-03 |
| 20 | GO:0004805: trehalose-phosphatase activity | 1.22E-03 |
| 21 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.41E-03 |
| 22 | GO:0070330: aromatase activity | 1.70E-03 |
| 23 | GO:0010329: auxin efflux transmembrane transporter activity | 1.84E-03 |
| 24 | GO:0005262: calcium channel activity | 1.84E-03 |
| 25 | GO:0015181: arginine transmembrane transporter activity | 2.47E-03 |
| 26 | GO:0017172: cysteine dioxygenase activity | 2.47E-03 |
| 27 | GO:0015189: L-lysine transmembrane transporter activity | 2.47E-03 |
| 28 | GO:0031418: L-ascorbic acid binding | 2.88E-03 |
| 29 | GO:0016829: lyase activity | 2.99E-03 |
| 30 | GO:0019199: transmembrane receptor protein kinase activity | 3.32E-03 |
| 31 | GO:0046556: alpha-L-arabinofuranosidase activity | 3.32E-03 |
| 32 | GO:0004845: uracil phosphoribosyltransferase activity | 3.32E-03 |
| 33 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 3.32E-03 |
| 34 | GO:0080032: methyl jasmonate esterase activity | 3.32E-03 |
| 35 | GO:0043015: gamma-tubulin binding | 3.32E-03 |
| 36 | GO:0030570: pectate lyase activity | 4.17E-03 |
| 37 | GO:0004372: glycine hydroxymethyltransferase activity | 4.26E-03 |
| 38 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 4.26E-03 |
| 39 | GO:0018685: alkane 1-monooxygenase activity | 4.26E-03 |
| 40 | GO:0008725: DNA-3-methyladenine glycosylase activity | 4.26E-03 |
| 41 | GO:0043621: protein self-association | 4.42E-03 |
| 42 | GO:0004674: protein serine/threonine kinase activity | 5.11E-03 |
| 43 | GO:0008519: ammonium transmembrane transporter activity | 5.27E-03 |
| 44 | GO:0004605: phosphatidate cytidylyltransferase activity | 5.27E-03 |
| 45 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 5.27E-03 |
| 46 | GO:0004849: uridine kinase activity | 6.36E-03 |
| 47 | GO:0003730: mRNA 3'-UTR binding | 6.36E-03 |
| 48 | GO:0004656: procollagen-proline 4-dioxygenase activity | 6.36E-03 |
| 49 | GO:0004124: cysteine synthase activity | 6.36E-03 |
| 50 | GO:0008195: phosphatidate phosphatase activity | 6.36E-03 |
| 51 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 6.36E-03 |
| 52 | GO:0004672: protein kinase activity | 6.74E-03 |
| 53 | GO:0003872: 6-phosphofructokinase activity | 7.52E-03 |
| 54 | GO:0019899: enzyme binding | 7.52E-03 |
| 55 | GO:0016301: kinase activity | 8.75E-03 |
| 56 | GO:0005215: transporter activity | 9.54E-03 |
| 57 | GO:0005375: copper ion transmembrane transporter activity | 1.01E-02 |
| 58 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 1.14E-02 |
| 59 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 1.14E-02 |
| 60 | GO:0003747: translation release factor activity | 1.14E-02 |
| 61 | GO:0004252: serine-type endopeptidase activity | 1.40E-02 |
| 62 | GO:0015238: drug transmembrane transporter activity | 1.42E-02 |
| 63 | GO:0008327: methyl-CpG binding | 1.59E-02 |
| 64 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.69E-02 |
| 65 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 1.75E-02 |
| 66 | GO:0003725: double-stranded RNA binding | 1.92E-02 |
| 67 | GO:0015266: protein channel activity | 1.92E-02 |
| 68 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.92E-02 |
| 69 | GO:0004089: carbonate dehydratase activity | 1.92E-02 |
| 70 | GO:0042393: histone binding | 1.96E-02 |
| 71 | GO:0008083: growth factor activity | 2.09E-02 |
| 72 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.09E-02 |
| 73 | GO:0004970: ionotropic glutamate receptor activity | 2.27E-02 |
| 74 | GO:0005217: intracellular ligand-gated ion channel activity | 2.27E-02 |
| 75 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.40E-02 |
| 76 | GO:0004857: enzyme inhibitor activity | 2.64E-02 |
| 77 | GO:0005345: purine nucleobase transmembrane transporter activity | 2.83E-02 |
| 78 | GO:0004176: ATP-dependent peptidase activity | 3.03E-02 |
| 79 | GO:0033612: receptor serine/threonine kinase binding | 3.03E-02 |
| 80 | GO:0035251: UDP-glucosyltransferase activity | 3.03E-02 |
| 81 | GO:0003690: double-stranded DNA binding | 3.09E-02 |
| 82 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 3.23E-02 |
| 83 | GO:0004650: polygalacturonase activity | 3.87E-02 |
| 84 | GO:0008536: Ran GTPase binding | 4.31E-02 |
| 85 | GO:0001085: RNA polymerase II transcription factor binding | 4.31E-02 |
| 86 | GO:0010181: FMN binding | 4.54E-02 |
| 87 | GO:0019901: protein kinase binding | 4.77E-02 |