co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G09160

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
2	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
3	GO:0015843: methylammonium transport	0.00E+00
4	GO:0031222: arabinan catabolic process	0.00E+00
5	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
6	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
7	GO:0007638: mechanosensory behavior	0.00E+00
8	GO:0045184: establishment of protein localization	0.00E+00
9	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
10	GO:0010068: protoderm histogenesis	0.00E+00
11	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
12	GO:0046620: regulation of organ growth	1.02E-09
13	GO:2000012: regulation of auxin polar transport	7.58E-05
14	GO:0030488: tRNA methylation	2.30E-04
15	GO:0009926: auxin polar transport	3.22E-04
16	GO:0009733: response to auxin	3.32E-04
17	GO:0042371: vitamin K biosynthetic process	3.47E-04
18	GO:0043087: regulation of GTPase activity	3.47E-04
19	GO:0035987: endodermal cell differentiation	3.47E-04
20	GO:0043609: regulation of carbon utilization	3.47E-04
21	GO:0006436: tryptophanyl-tRNA aminoacylation	3.47E-04
22	GO:0000066: mitochondrial ornithine transport	3.47E-04
23	GO:0006427: histidyl-tRNA aminoacylation	3.47E-04
24	GO:0042659: regulation of cell fate specification	3.47E-04
25	GO:0090558: plant epidermis development	3.47E-04
26	GO:0070509: calcium ion import	3.47E-04
27	GO:0009638: phototropism	6.53E-04
28	GO:0042325: regulation of phosphorylation	7.56E-04
29	GO:0060359: response to ammonium ion	7.56E-04
30	GO:0000160: phosphorelay signal transduction system	1.21E-03
31	GO:0001578: microtubule bundle formation	1.22E-03
32	GO:0043157: response to cation stress	1.22E-03
33	GO:0090708: specification of plant organ axis polarity	1.22E-03
34	GO:0006000: fructose metabolic process	1.22E-03
35	GO:0009734: auxin-activated signaling pathway	1.25E-03
36	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.36E-03
37	GO:0070588: calcium ion transmembrane transport	1.43E-03
38	GO:0051289: protein homotetramerization	1.76E-03
39	GO:0005992: trehalose biosynthetic process	1.76E-03
40	GO:0051513: regulation of monopolar cell growth	1.76E-03
41	GO:0007231: osmosensory signaling pathway	1.76E-03
42	GO:0051639: actin filament network formation	1.76E-03
43	GO:0044211: CTP salvage	1.76E-03
44	GO:0048645: animal organ formation	1.76E-03
45	GO:0015696: ammonium transport	1.76E-03
46	GO:0046739: transport of virus in multicellular host	1.76E-03
47	GO:2000904: regulation of starch metabolic process	1.76E-03
48	GO:0040008: regulation of growth	1.89E-03
49	GO:0051764: actin crosslink formation	2.37E-03
50	GO:0051322: anaphase	2.37E-03
51	GO:0072488: ammonium transmembrane transport	2.37E-03
52	GO:0022622: root system development	2.37E-03
53	GO:0044206: UMP salvage	2.37E-03
54	GO:0030104: water homeostasis	2.37E-03
55	GO:0033500: carbohydrate homeostasis	2.37E-03
56	GO:0046656: folic acid biosynthetic process	2.37E-03
57	GO:0010236: plastoquinone biosynthetic process	3.03E-03
58	GO:0016123: xanthophyll biosynthetic process	3.03E-03
59	GO:0009736: cytokinin-activated signaling pathway	3.10E-03
60	GO:0010405: arabinogalactan protein metabolic process	3.74E-03
61	GO:0009959: negative gravitropism	3.74E-03
62	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	3.74E-03
63	GO:0006206: pyrimidine nucleobase metabolic process	3.74E-03
64	GO:0006655: phosphatidylglycerol biosynthetic process	3.74E-03
65	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.74E-03
66	GO:0046654: tetrahydrofolate biosynthetic process	4.50E-03
67	GO:2000067: regulation of root morphogenesis	4.50E-03
68	GO:0042372: phylloquinone biosynthetic process	4.50E-03
69	GO:0009828: plant-type cell wall loosening	5.22E-03
70	GO:0010444: guard mother cell differentiation	5.32E-03
71	GO:0030307: positive regulation of cell growth	5.32E-03
72	GO:0032880: regulation of protein localization	5.32E-03
73	GO:0009610: response to symbiotic fungus	5.32E-03
74	GO:0048528: post-embryonic root development	5.32E-03
75	GO:0007050: cell cycle arrest	5.32E-03
76	GO:0009772: photosynthetic electron transport in photosystem II	5.32E-03
77	GO:0009396: folic acid-containing compound biosynthetic process	5.32E-03
78	GO:0055075: potassium ion homeostasis	6.17E-03
79	GO:0048564: photosystem I assembly	6.17E-03
80	GO:0009787: regulation of abscisic acid-activated signaling pathway	6.17E-03
81	GO:0010027: thylakoid membrane organization	6.23E-03
82	GO:0032544: plastid translation	7.08E-03
83	GO:0006002: fructose 6-phosphate metabolic process	7.08E-03
84	GO:0009827: plant-type cell wall modification	7.08E-03
85	GO:0010497: plasmodesmata-mediated intercellular transport	7.08E-03
86	GO:0000373: Group II intron splicing	8.04E-03
87	GO:0000902: cell morphogenesis	8.04E-03
88	GO:0009051: pentose-phosphate shunt, oxidative branch	8.04E-03
89	GO:0031425: chloroplast RNA processing	9.03E-03
90	GO:2000280: regulation of root development	9.03E-03
91	GO:0045036: protein targeting to chloroplast	1.01E-02
92	GO:0006949: syncytium formation	1.01E-02
93	GO:0006259: DNA metabolic process	1.01E-02
94	GO:0006535: cysteine biosynthetic process from serine	1.01E-02
95	GO:0007275: multicellular organism development	1.11E-02
96	GO:0010015: root morphogenesis	1.12E-02
97	GO:0006816: calcium ion transport	1.12E-02
98	GO:0009773: photosynthetic electron transport in photosystem I	1.12E-02
99	GO:0006265: DNA topological change	1.12E-02
100	GO:0006508: proteolysis	1.16E-02
101	GO:0006839: mitochondrial transport	1.18E-02
102	GO:0016024: CDP-diacylglycerol biosynthetic process	1.23E-02
103	GO:0045037: protein import into chloroplast stroma	1.23E-02
104	GO:0006006: glucose metabolic process	1.34E-02
105	GO:0050826: response to freezing	1.34E-02
106	GO:0009767: photosynthetic electron transport chain	1.34E-02
107	GO:0009785: blue light signaling pathway	1.34E-02
108	GO:0010628: positive regulation of gene expression	1.34E-02
109	GO:0008643: carbohydrate transport	1.45E-02
110	GO:0010207: photosystem II assembly	1.46E-02
111	GO:0006855: drug transmembrane transport	1.56E-02
112	GO:0090351: seedling development	1.59E-02
113	GO:0009826: unidimensional cell growth	1.62E-02
114	GO:0009664: plant-type cell wall organization	1.68E-02
115	GO:0009833: plant-type primary cell wall biogenesis	1.71E-02
116	GO:0006833: water transport	1.71E-02
117	GO:0051017: actin filament bundle assembly	1.85E-02
118	GO:0019344: cysteine biosynthetic process	1.85E-02
119	GO:0051603: proteolysis involved in cellular protein catabolic process	1.87E-02
120	GO:0051302: regulation of cell division	1.98E-02
121	GO:0019953: sexual reproduction	1.98E-02
122	GO:0006418: tRNA aminoacylation for protein translation	1.98E-02
123	GO:0016998: cell wall macromolecule catabolic process	2.12E-02
124	GO:0048367: shoot system development	2.21E-02
125	GO:0080167: response to karrikin	2.24E-02
126	GO:0031348: negative regulation of defense response	2.26E-02
127	GO:0006730: one-carbon metabolic process	2.26E-02
128	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.40E-02
129	GO:0009686: gibberellin biosynthetic process	2.40E-02
130	GO:0010082: regulation of root meristem growth	2.40E-02
131	GO:0046777: protein autophosphorylation	2.43E-02
132	GO:0010214: seed coat development	2.55E-02
133	GO:0008284: positive regulation of cell proliferation	2.70E-02
134	GO:0009742: brassinosteroid mediated signaling pathway	2.73E-02
135	GO:0000226: microtubule cytoskeleton organization	2.85E-02
136	GO:0042335: cuticle development	2.85E-02
137	GO:0009741: response to brassinosteroid	3.01E-02
138	GO:0010268: brassinosteroid homeostasis	3.01E-02
139	GO:0009958: positive gravitropism	3.01E-02
140	GO:0007059: chromosome segregation	3.17E-02
141	GO:0007165: signal transduction	3.22E-02
142	GO:0008654: phospholipid biosynthetic process	3.33E-02
143	GO:0009058: biosynthetic process	3.40E-02
144	GO:0016132: brassinosteroid biosynthetic process	3.50E-02
145	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.50E-02
146	GO:0071554: cell wall organization or biogenesis	3.50E-02
147	GO:0000302: response to reactive oxygen species	3.50E-02
148	GO:0009630: gravitropism	3.67E-02
149	GO:0010583: response to cyclopentenone	3.67E-02
150	GO:0009790: embryo development	3.76E-02
151	GO:1901657: glycosyl compound metabolic process	3.84E-02
152	GO:0016125: sterol metabolic process	4.01E-02
153	GO:0010252: auxin homeostasis	4.01E-02
154	GO:0006468: protein phosphorylation	4.30E-02
155	GO:0051607: defense response to virus	4.36E-02
156	GO:0000910: cytokinesis	4.36E-02
157	GO:0006810: transport	4.43E-02
158	GO:0006974: cellular response to DNA damage stimulus	4.91E-02
159	GO:0009739: response to gibberellin	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity	0.00E+00
2	GO:0004056: argininosuccinate lyase activity	0.00E+00
3	GO:0070009: serine-type aminopeptidase activity	0.00E+00
4	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
5	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
6	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
7	GO:0001872: (1->3)-beta-D-glucan binding	4.24E-05
8	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	3.47E-04
9	GO:0004830: tryptophan-tRNA ligase activity	3.47E-04
10	GO:0050139: nicotinate-N-glucosyltransferase activity	3.47E-04
11	GO:0004156: dihydropteroate synthase activity	3.47E-04
12	GO:0003848: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity	3.47E-04
13	GO:0005290: L-histidine transmembrane transporter activity	3.47E-04
14	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	3.47E-04
15	GO:0051777: ent-kaurenoate oxidase activity	3.47E-04
16	GO:0004821: histidine-tRNA ligase activity	3.47E-04
17	GO:0000156: phosphorelay response regulator activity	6.06E-04
18	GO:0050017: L-3-cyanoalanine synthase activity	7.56E-04
19	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	7.56E-04
20	GO:0000064: L-ornithine transmembrane transporter activity	7.56E-04
21	GO:0004805: trehalose-phosphatase activity	7.61E-04
22	GO:0005262: calcium channel activity	1.13E-03
23	GO:0070180: large ribosomal subunit rRNA binding	1.22E-03
24	GO:0070330: aromatase activity	1.22E-03
25	GO:0015189: L-lysine transmembrane transporter activity	1.76E-03
26	GO:0015181: arginine transmembrane transporter activity	1.76E-03
27	GO:0004176: ATP-dependent peptidase activity	2.13E-03
28	GO:0046556: alpha-L-arabinofuranosidase activity	2.37E-03
29	GO:0004659: prenyltransferase activity	2.37E-03
30	GO:0004845: uracil phosphoribosyltransferase activity	2.37E-03
31	GO:0004345: glucose-6-phosphate dehydrogenase activity	2.37E-03
32	GO:0018685: alkane 1-monooxygenase activity	3.03E-03
33	GO:0008519: ammonium transmembrane transporter activity	3.74E-03
34	GO:2001070: starch binding	3.74E-03
35	GO:0004605: phosphatidate cytidylyltransferase activity	3.74E-03
36	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.74E-03
37	GO:0004124: cysteine synthase activity	4.50E-03
38	GO:0008195: phosphatidate phosphatase activity	4.50E-03
39	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	4.50E-03
40	GO:0004849: uridine kinase activity	4.50E-03
41	GO:0051015: actin filament binding	4.91E-03
42	GO:0019899: enzyme binding	5.32E-03
43	GO:0004674: protein serine/threonine kinase activity	6.34E-03
44	GO:0008173: RNA methyltransferase activity	7.08E-03
45	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	7.08E-03
46	GO:0030247: polysaccharide binding	7.35E-03
47	GO:0015238: drug transmembrane transporter activity	8.56E-03
48	GO:0008327: methyl-CpG binding	1.12E-02
49	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.12E-02
50	GO:0004089: carbonate dehydratase activity	1.34E-02
51	GO:0004185: serine-type carboxypeptidase activity	1.34E-02
52	GO:0019888: protein phosphatase regulator activity	1.34E-02
53	GO:0009982: pseudouridine synthase activity	1.34E-02
54	GO:0004022: alcohol dehydrogenase (NAD) activity	1.34E-02
55	GO:0008083: growth factor activity	1.46E-02
56	GO:0005345: purine nucleobase transmembrane transporter activity	1.98E-02
57	GO:0003964: RNA-directed DNA polymerase activity	2.12E-02
58	GO:0008408: 3'-5' exonuclease activity	2.12E-02
59	GO:0016760: cellulose synthase (UDP-forming) activity	2.40E-02
60	GO:0022891: substrate-specific transmembrane transporter activity	2.40E-02
61	GO:0008514: organic anion transmembrane transporter activity	2.55E-02
62	GO:0004812: aminoacyl-tRNA ligase activity	2.70E-02
63	GO:0004871: signal transducer activity	2.97E-02
64	GO:0004527: exonuclease activity	3.01E-02
65	GO:0016829: lyase activity	3.48E-02
66	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.50E-02
67	GO:0030246: carbohydrate binding	3.62E-02
68	GO:0015144: carbohydrate transmembrane transporter activity	3.85E-02
69	GO:0016759: cellulose synthase activity	4.01E-02
70	GO:0016301: kinase activity	4.04E-02
71	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.14E-02
72	GO:0008237: metallopeptidase activity	4.19E-02
73	GO:0015297: antiporter activity	4.23E-02
74	GO:0005351: sugar:proton symporter activity	4.33E-02
75	GO:0016413: O-acetyltransferase activity	4.36E-02
76	GO:0016597: amino acid binding	4.36E-02
77	GO:0004672: protein kinase activity	4.43E-02
78	GO:0005525: GTP binding	4.82E-02