Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G07440

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042820: vitamin B6 catabolic process0.00E+00
2GO:0071474: cellular hyperosmotic response0.00E+00
3GO:0070125: mitochondrial translational elongation0.00E+00
4GO:0009249: protein lipoylation0.00E+00
5GO:0002184: cytoplasmic translational termination0.00E+00
6GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
7GO:0042821: pyridoxal biosynthetic process0.00E+00
8GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
9GO:0009106: lipoate metabolic process0.00E+00
10GO:0090042: tubulin deacetylation0.00E+00
11GO:0018023: peptidyl-lysine trimethylation0.00E+00
12GO:0090279: regulation of calcium ion import0.00E+00
13GO:0071482: cellular response to light stimulus4.54E-06
14GO:0010190: cytochrome b6f complex assembly7.36E-05
15GO:0015671: oxygen transport2.06E-04
16GO:1901135: carbohydrate derivative metabolic process2.06E-04
17GO:0000476: maturation of 4.5S rRNA2.06E-04
18GO:0009443: pyridoxal 5'-phosphate salvage2.06E-04
19GO:0000967: rRNA 5'-end processing2.06E-04
20GO:0032544: plastid translation2.15E-04
21GO:0010027: thylakoid membrane organization3.13E-04
22GO:0006352: DNA-templated transcription, initiation4.23E-04
23GO:0018026: peptidyl-lysine monomethylation4.62E-04
24GO:0000256: allantoin catabolic process4.62E-04
25GO:0051262: protein tetramerization4.62E-04
26GO:0034470: ncRNA processing4.62E-04
27GO:0010275: NAD(P)H dehydrogenase complex assembly4.62E-04
28GO:0010198: synergid death4.62E-04
29GO:0006435: threonyl-tRNA aminoacylation4.62E-04
30GO:1900871: chloroplast mRNA modification4.62E-04
31GO:0005983: starch catabolic process4.85E-04
32GO:0010207: photosystem II assembly6.19E-04
33GO:0015940: pantothenate biosynthetic process7.52E-04
34GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition7.52E-04
35GO:0010136: ureide catabolic process7.52E-04
36GO:2001141: regulation of RNA biosynthetic process1.07E-03
37GO:0009102: biotin biosynthetic process1.07E-03
38GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.07E-03
39GO:0006145: purine nucleobase catabolic process1.07E-03
40GO:0009658: chloroplast organization1.24E-03
41GO:0071483: cellular response to blue light1.43E-03
42GO:0016117: carotenoid biosynthetic process1.43E-03
43GO:0009765: photosynthesis, light harvesting1.43E-03
44GO:0022622: root system development1.43E-03
45GO:0046907: intracellular transport1.81E-03
46GO:0045038: protein import into chloroplast thylakoid membrane1.81E-03
47GO:0009107: lipoate biosynthetic process1.81E-03
48GO:0016123: xanthophyll biosynthetic process1.81E-03
49GO:0016120: carotene biosynthetic process1.81E-03
50GO:0080110: sporopollenin biosynthetic process1.81E-03
51GO:0006655: phosphatidylglycerol biosynthetic process2.24E-03
52GO:1901259: chloroplast rRNA processing2.69E-03
53GO:0032880: regulation of protein localization3.16E-03
54GO:0006614: SRP-dependent cotranslational protein targeting to membrane3.16E-03
55GO:0006413: translational initiation3.40E-03
56GO:0015995: chlorophyll biosynthetic process3.45E-03
57GO:0006605: protein targeting3.67E-03
58GO:0000105: histidine biosynthetic process3.67E-03
59GO:0048564: photosystem I assembly3.67E-03
60GO:0017004: cytochrome complex assembly4.20E-03
61GO:0022900: electron transport chain4.20E-03
62GO:0007568: aging4.42E-03
63GO:0019432: triglyceride biosynthetic process4.75E-03
64GO:0009821: alkaloid biosynthetic process4.75E-03
65GO:0010206: photosystem II repair4.75E-03
66GO:0006779: porphyrin-containing compound biosynthetic process5.32E-03
67GO:0031425: chloroplast RNA processing5.32E-03
68GO:0006631: fatty acid metabolic process5.75E-03
69GO:0006782: protoporphyrinogen IX biosynthetic process5.93E-03
70GO:0006415: translational termination6.55E-03
71GO:0019684: photosynthesis, light reaction6.55E-03
72GO:0009089: lysine biosynthetic process via diaminopimelate6.55E-03
73GO:0042254: ribosome biogenesis6.64E-03
74GO:0016024: CDP-diacylglycerol biosynthetic process7.20E-03
75GO:0009725: response to hormone7.87E-03
76GO:0009767: photosynthetic electron transport chain7.87E-03
77GO:2000012: regulation of auxin polar transport7.87E-03
78GO:0090351: seedling development9.27E-03
79GO:0015031: protein transport9.57E-03
80GO:0000162: tryptophan biosynthetic process1.00E-02
81GO:0015979: photosynthesis1.01E-02
82GO:0016575: histone deacetylation1.15E-02
83GO:0007017: microtubule-based process1.15E-02
84GO:0048511: rhythmic process1.23E-02
85GO:0061077: chaperone-mediated protein folding1.23E-02
86GO:0080092: regulation of pollen tube growth1.32E-02
87GO:0019748: secondary metabolic process1.32E-02
88GO:0006012: galactose metabolic process1.40E-02
89GO:0009306: protein secretion1.48E-02
90GO:0006397: mRNA processing1.48E-02
91GO:0010584: pollen exine formation1.48E-02
92GO:0051028: mRNA transport1.57E-02
93GO:0008284: positive regulation of cell proliferation1.57E-02
94GO:0006508: proteolysis1.58E-02
95GO:0009958: positive gravitropism1.75E-02
96GO:0042752: regulation of circadian rhythm1.84E-02
97GO:0009735: response to cytokinin2.58E-02
98GO:0016126: sterol biosynthetic process2.64E-02
99GO:0009793: embryo development ending in seed dormancy2.66E-02
100GO:0009817: defense response to fungus, incompatible interaction3.19E-02
101GO:0048527: lateral root development3.54E-02
102GO:0045087: innate immune response3.78E-02
103GO:0006457: protein folding3.96E-02
104GO:0006412: translation4.23E-02
105GO:0009744: response to sucrose4.52E-02
106GO:0055114: oxidation-reduction process4.78E-02
RankGO TermAdjusted P value
1GO:0043014: alpha-tubulin binding0.00E+00
2GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
3GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
4GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
5GO:0005048: signal sequence binding0.00E+00
6GO:0004076: biotin synthase activity0.00E+00
7GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
8GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
9GO:0051721: protein phosphatase 2A binding0.00E+00
10GO:0042903: tubulin deacetylase activity0.00E+00
11GO:0045435: lycopene epsilon cyclase activity0.00E+00
12GO:0050613: delta14-sterol reductase activity0.00E+00
13GO:0070402: NADPH binding7.40E-06
14GO:0003755: peptidyl-prolyl cis-trans isomerase activity7.78E-06
15GO:0016851: magnesium chelatase activity1.69E-05
16GO:0001053: plastid sigma factor activity3.11E-05
17GO:0016987: sigma factor activity3.11E-05
18GO:0005528: FK506 binding4.88E-05
19GO:0005080: protein kinase C binding2.06E-04
20GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity2.06E-04
21GO:0016784: 3-mercaptopyruvate sulfurtransferase activity2.06E-04
22GO:0005344: oxygen transporter activity2.06E-04
23GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity2.06E-04
24GO:0005227: calcium activated cation channel activity2.06E-04
25GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity2.06E-04
26GO:0097367: carbohydrate derivative binding2.06E-04
27GO:0050308: sugar-phosphatase activity2.06E-04
28GO:0004856: xylulokinase activity2.06E-04
29GO:0009496: plastoquinol--plastocyanin reductase activity2.06E-04
30GO:0019203: carbohydrate phosphatase activity2.06E-04
31GO:0017118: lipoyltransferase activity4.62E-04
32GO:0016415: octanoyltransferase activity4.62E-04
33GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity4.62E-04
34GO:0004829: threonine-tRNA ligase activity4.62E-04
35GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase4.62E-04
36GO:0031072: heat shock protein binding5.50E-04
37GO:0030267: glyoxylate reductase (NADP) activity7.52E-04
38GO:0003955: NAD(P)H dehydrogenase (quinone) activity7.52E-04
39GO:0043023: ribosomal large subunit binding1.07E-03
40GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.07E-03
41GO:0048487: beta-tubulin binding1.07E-03
42GO:0004792: thiosulfate sulfurtransferase activity1.07E-03
43GO:0016149: translation release factor activity, codon specific1.07E-03
44GO:0016279: protein-lysine N-methyltransferase activity1.43E-03
45GO:0004045: aminoacyl-tRNA hydrolase activity1.43E-03
46GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.43E-03
47GO:0016853: isomerase activity1.78E-03
48GO:0008374: O-acyltransferase activity1.81E-03
49GO:0016773: phosphotransferase activity, alcohol group as acceptor1.81E-03
50GO:2001070: starch binding2.24E-03
51GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.24E-03
52GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity2.69E-03
53GO:0005261: cation channel activity2.69E-03
54GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.69E-03
55GO:0008312: 7S RNA binding3.67E-03
56GO:0004034: aldose 1-epimerase activity3.67E-03
57GO:0004033: aldo-keto reductase (NADP) activity3.67E-03
58GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)4.20E-03
59GO:0004222: metalloendopeptidase activity4.21E-03
60GO:0003743: translation initiation factor activity4.53E-03
61GO:0003747: translation release factor activity4.75E-03
62GO:0008138: protein tyrosine/serine/threonine phosphatase activity4.75E-03
63GO:0003746: translation elongation factor activity4.84E-03
64GO:0016844: strictosidine synthase activity5.32E-03
65GO:0005089: Rho guanyl-nucleotide exchange factor activity6.55E-03
66GO:0051537: 2 iron, 2 sulfur cluster binding6.74E-03
67GO:0003899: DNA-directed 5'-3' RNA polymerase activity8.40E-03
68GO:0008266: poly(U) RNA binding8.56E-03
69GO:0008083: growth factor activity8.56E-03
70GO:0004407: histone deacetylase activity1.08E-02
71GO:0051082: unfolded protein binding1.20E-02
72GO:0003729: mRNA binding1.26E-02
73GO:0003756: protein disulfide isomerase activity1.48E-02
74GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.54E-02
75GO:0004252: serine-type endopeptidase activity1.67E-02
76GO:0003723: RNA binding1.68E-02
77GO:0008080: N-acetyltransferase activity1.75E-02
78GO:0050662: coenzyme binding1.84E-02
79GO:0005509: calcium ion binding1.91E-02
80GO:0004872: receptor activity1.94E-02
81GO:0048038: quinone binding2.03E-02
82GO:0005200: structural constituent of cytoskeleton2.43E-02
83GO:0016887: ATPase activity2.43E-02
84GO:0008483: transaminase activity2.43E-02
85GO:0004721: phosphoprotein phosphatase activity2.97E-02
86GO:0008236: serine-type peptidase activity3.08E-02
87GO:0008168: methyltransferase activity3.10E-02
88GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.19E-02
89GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.54E-02
90GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.78E-02
91GO:0051539: 4 iron, 4 sulfur cluster binding4.15E-02
92GO:0004185: serine-type carboxypeptidase activity4.52E-02
93GO:0043621: protein self-association4.78E-02
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Gene type



Gene DE type