Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G07320

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
2GO:0006223: uracil salvage0.00E+00
3GO:0090470: shoot organ boundary specification0.00E+00
4GO:0016553: base conversion or substitution editing0.00E+00
5GO:0090279: regulation of calcium ion import0.00E+00
6GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
7GO:0071474: cellular hyperosmotic response0.00E+00
8GO:0034337: RNA folding0.00E+00
9GO:0002184: cytoplasmic translational termination0.00E+00
10GO:0015995: chlorophyll biosynthetic process3.26E-10
11GO:0015979: photosynthesis6.66E-09
12GO:0010021: amylopectin biosynthetic process6.79E-07
13GO:0019252: starch biosynthetic process1.73E-06
14GO:0055114: oxidation-reduction process1.58E-05
15GO:0009735: response to cytokinin1.98E-05
16GO:0009658: chloroplast organization2.82E-05
17GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly4.45E-05
18GO:0010207: photosystem II assembly9.75E-05
19GO:0043097: pyrimidine nucleoside salvage1.23E-04
20GO:0006206: pyrimidine nucleobase metabolic process1.78E-04
21GO:0019748: secondary metabolic process2.39E-04
22GO:1901259: chloroplast rRNA processing2.41E-04
23GO:0009854: oxidative photosynthetic carbon pathway2.41E-04
24GO:1902478: negative regulation of defense response to bacterium, incompatible interaction3.57E-04
25GO:0043489: RNA stabilization3.57E-04
26GO:0043953: protein transport by the Tat complex3.57E-04
27GO:0015671: oxygen transport3.57E-04
28GO:1904966: positive regulation of vitamin E biosynthetic process3.57E-04
29GO:0000481: maturation of 5S rRNA3.57E-04
30GO:0015801: aromatic amino acid transport3.57E-04
31GO:1904964: positive regulation of phytol biosynthetic process3.57E-04
32GO:0065002: intracellular protein transmembrane transport3.57E-04
33GO:0006633: fatty acid biosynthetic process3.67E-04
34GO:0048564: photosystem I assembly3.92E-04
35GO:0032544: plastid translation4.81E-04
36GO:0071482: cellular response to light stimulus4.81E-04
37GO:0006783: heme biosynthetic process5.76E-04
38GO:0006412: translation5.93E-04
39GO:0006779: porphyrin-containing compound biosynthetic process6.80E-04
40GO:1902326: positive regulation of chlorophyll biosynthetic process7.77E-04
41GO:0006435: threonyl-tRNA aminoacylation7.77E-04
42GO:0000256: allantoin catabolic process7.77E-04
43GO:0030388: fructose 1,6-bisphosphate metabolic process7.77E-04
44GO:0051262: protein tetramerization7.77E-04
45GO:0010275: NAD(P)H dehydrogenase complex assembly7.77E-04
46GO:0006782: protoporphyrinogen IX biosynthetic process7.93E-04
47GO:0009773: photosynthetic electron transport in photosystem I9.13E-04
48GO:0042254: ribosome biogenesis9.82E-04
49GO:0006094: gluconeogenesis1.18E-03
50GO:0009817: defense response to fungus, incompatible interaction1.20E-03
51GO:0006000: fructose metabolic process1.26E-03
52GO:0006518: peptide metabolic process1.26E-03
53GO:0010136: ureide catabolic process1.26E-03
54GO:0034051: negative regulation of plant-type hypersensitive response1.26E-03
55GO:0044375: regulation of peroxisome size1.26E-03
56GO:0005977: glycogen metabolic process1.26E-03
57GO:0019253: reductive pentose-phosphate cycle1.33E-03
58GO:0009853: photorespiration1.62E-03
59GO:0009052: pentose-phosphate shunt, non-oxidative branch1.81E-03
60GO:0033014: tetrapyrrole biosynthetic process1.81E-03
61GO:0006145: purine nucleobase catabolic process1.81E-03
62GO:0010731: protein glutathionylation1.81E-03
63GO:0006424: glutamyl-tRNA aminoacylation1.81E-03
64GO:1901332: negative regulation of lateral root development1.81E-03
65GO:0006986: response to unfolded protein1.81E-03
66GO:2001141: regulation of RNA biosynthetic process1.81E-03
67GO:0010371: regulation of gibberellin biosynthetic process1.81E-03
68GO:0006020: inositol metabolic process1.81E-03
69GO:0051085: chaperone mediated protein folding requiring cofactor1.81E-03
70GO:0009152: purine ribonucleotide biosynthetic process1.81E-03
71GO:0046653: tetrahydrofolate metabolic process1.81E-03
72GO:0010600: regulation of auxin biosynthetic process2.44E-03
73GO:0006021: inositol biosynthetic process2.44E-03
74GO:0044206: UMP salvage2.44E-03
75GO:0006536: glutamate metabolic process2.44E-03
76GO:0032543: mitochondrial translation3.11E-03
77GO:0006564: L-serine biosynthetic process3.11E-03
78GO:0009107: lipoate biosynthetic process3.11E-03
79GO:0000304: response to singlet oxygen3.11E-03
80GO:0080110: sporopollenin biosynthetic process3.11E-03
81GO:0006655: phosphatidylglycerol biosynthetic process3.85E-03
82GO:0046855: inositol phosphate dephosphorylation3.85E-03
83GO:0006014: D-ribose metabolic process3.85E-03
84GO:0042549: photosystem II stabilization3.85E-03
85GO:0000470: maturation of LSU-rRNA3.85E-03
86GO:0010244: response to low fluence blue light stimulus by blue low-fluence system4.64E-03
87GO:0032502: developmental process4.81E-03
88GO:0009645: response to low light intensity stimulus5.48E-03
89GO:0006400: tRNA modification5.48E-03
90GO:0010161: red light signaling pathway5.48E-03
91GO:0009772: photosynthetic electron transport in photosystem II5.48E-03
92GO:0010928: regulation of auxin mediated signaling pathway6.37E-03
93GO:0005978: glycogen biosynthetic process6.37E-03
94GO:0042255: ribosome assembly6.37E-03
95GO:0006353: DNA-templated transcription, termination6.37E-03
96GO:0009704: de-etiolation6.37E-03
97GO:0032508: DNA duplex unwinding6.37E-03
98GO:0016559: peroxisome fission6.37E-03
99GO:0010027: thylakoid membrane organization6.51E-03
100GO:0006526: arginine biosynthetic process7.30E-03
101GO:0006002: fructose 6-phosphate metabolic process7.30E-03
102GO:0019432: triglyceride biosynthetic process8.29E-03
103GO:0006754: ATP biosynthetic process8.29E-03
104GO:0018298: protein-chromophore linkage8.51E-03
105GO:0031425: chloroplast RNA processing9.31E-03
106GO:0005982: starch metabolic process9.31E-03
107GO:0006535: cysteine biosynthetic process from serine1.04E-02
108GO:0016051: carbohydrate biosynthetic process1.08E-02
109GO:0019684: photosynthesis, light reaction1.15E-02
110GO:0009089: lysine biosynthetic process via diaminopimelate1.15E-02
111GO:0008285: negative regulation of cell proliferation1.15E-02
112GO:0006352: DNA-templated transcription, initiation1.15E-02
113GO:0018119: peptidyl-cysteine S-nitrosylation1.15E-02
114GO:0016024: CDP-diacylglycerol biosynthetic process1.27E-02
115GO:0006790: sulfur compound metabolic process1.27E-02
116GO:0006631: fatty acid metabolic process1.29E-02
117GO:0006807: nitrogen compound metabolic process1.39E-02
118GO:0018107: peptidyl-threonine phosphorylation1.39E-02
119GO:0009767: photosynthetic electron transport chain1.39E-02
120GO:0005986: sucrose biosynthetic process1.39E-02
121GO:0009266: response to temperature stimulus1.51E-02
122GO:0046854: phosphatidylinositol phosphorylation1.64E-02
123GO:0007031: peroxisome organization1.64E-02
124GO:0006636: unsaturated fatty acid biosynthetic process1.77E-02
125GO:0019762: glucosinolate catabolic process1.77E-02
126GO:0006364: rRNA processing1.89E-02
127GO:0000027: ribosomal large subunit assembly1.90E-02
128GO:0006289: nucleotide-excision repair1.90E-02
129GO:0019344: cysteine biosynthetic process1.90E-02
130GO:0009116: nucleoside metabolic process1.90E-02
131GO:0005975: carbohydrate metabolic process1.93E-02
132GO:0007017: microtubule-based process2.04E-02
133GO:0009768: photosynthesis, light harvesting in photosystem I2.04E-02
134GO:0010073: meristem maintenance2.04E-02
135GO:0031408: oxylipin biosynthetic process2.18E-02
136GO:0003333: amino acid transmembrane transport2.18E-02
137GO:0048511: rhythmic process2.18E-02
138GO:0010431: seed maturation2.18E-02
139GO:0006096: glycolytic process2.23E-02
140GO:0016226: iron-sulfur cluster assembly2.33E-02
141GO:0035428: hexose transmembrane transport2.33E-02
142GO:0080092: regulation of pollen tube growth2.33E-02
143GO:0010017: red or far-red light signaling pathway2.33E-02
144GO:0009625: response to insect2.48E-02
145GO:0010227: floral organ abscission2.48E-02
146GO:0010584: pollen exine formation2.63E-02
147GO:0042335: cuticle development2.95E-02
148GO:0042631: cellular response to water deprivation2.95E-02
149GO:0006508: proteolysis3.07E-02
150GO:0006520: cellular amino acid metabolic process3.11E-02
151GO:0046323: glucose import3.11E-02
152GO:0015986: ATP synthesis coupled proton transport3.27E-02
153GO:0009791: post-embryonic development3.44E-02
154GO:0009058: biosynthetic process3.55E-02
155GO:0000302: response to reactive oxygen species3.61E-02
156GO:0006629: lipid metabolic process3.83E-02
157GO:0042744: hydrogen peroxide catabolic process3.83E-02
158GO:0009567: double fertilization forming a zygote and endosperm4.14E-02
159GO:0009409: response to cold4.17E-02
160GO:0016126: sterol biosynthetic process4.69E-02
161GO:0006810: transport4.76E-02
162GO:0010228: vegetative to reproductive phase transition of meristem4.84E-02
RankGO TermAdjusted P value
1GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
2GO:0008887: glycerate kinase activity0.00E+00
3GO:0050613: delta14-sterol reductase activity0.00E+00
4GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
5GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
6GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
7GO:0008974: phosphoribulokinase activity0.00E+00
8GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
9GO:0008465: glycerate dehydrogenase activity0.00E+00
10GO:0046408: chlorophyll synthetase activity0.00E+00
11GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
12GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
13GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
14GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
15GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
16GO:0019144: ADP-sugar diphosphatase activity0.00E+00
17GO:0019843: rRNA binding3.85E-10
18GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity5.76E-06
19GO:0016851: magnesium chelatase activity4.45E-05
20GO:0003735: structural constituent of ribosome5.02E-05
21GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor7.90E-05
22GO:0004849: uridine kinase activity2.41E-04
23GO:0004856: xylulokinase activity3.57E-04
24GO:0080042: ADP-glucose pyrophosphohydrolase activity3.57E-04
25GO:0004325: ferrochelatase activity3.57E-04
26GO:0004853: uroporphyrinogen decarboxylase activity3.57E-04
27GO:0005080: protein kinase C binding3.57E-04
28GO:0005344: oxygen transporter activity3.57E-04
29GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity3.57E-04
30GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity3.57E-04
31GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity3.57E-04
32GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity3.57E-04
33GO:0005227: calcium activated cation channel activity3.57E-04
34GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.57E-04
35GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.41E-04
36GO:0048038: quinone binding5.42E-04
37GO:0016491: oxidoreductase activity5.77E-04
38GO:0003844: 1,4-alpha-glucan branching enzyme activity7.77E-04
39GO:0016630: protochlorophyllide reductase activity7.77E-04
40GO:0008934: inositol monophosphate 1-phosphatase activity7.77E-04
41GO:0004829: threonine-tRNA ligase activity7.77E-04
42GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity7.77E-04
43GO:0019156: isoamylase activity7.77E-04
44GO:0052833: inositol monophosphate 4-phosphatase activity7.77E-04
45GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase7.77E-04
46GO:0050017: L-3-cyanoalanine synthase activity7.77E-04
47GO:0042389: omega-3 fatty acid desaturase activity7.77E-04
48GO:0080041: ADP-ribose pyrophosphohydrolase activity7.77E-04
49GO:0009977: proton motive force dependent protein transmembrane transporter activity7.77E-04
50GO:0004617: phosphoglycerate dehydrogenase activity7.77E-04
51GO:0052832: inositol monophosphate 3-phosphatase activity7.77E-04
52GO:0033201: alpha-1,4-glucan synthase activity7.77E-04
53GO:0015173: aromatic amino acid transmembrane transporter activity7.77E-04
54GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity7.77E-04
55GO:0031072: heat shock protein binding1.18E-03
56GO:0004373: glycogen (starch) synthase activity1.26E-03
57GO:0005504: fatty acid binding1.26E-03
58GO:0016992: lipoate synthase activity1.26E-03
59GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.26E-03
60GO:0004751: ribose-5-phosphate isomerase activity1.26E-03
61GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.26E-03
62GO:0070402: NADPH binding1.26E-03
63GO:0008864: formyltetrahydrofolate deformylase activity1.26E-03
64GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.26E-03
65GO:0043169: cation binding1.26E-03
66GO:0008266: poly(U) RNA binding1.33E-03
67GO:0003746: translation elongation factor activity1.62E-03
68GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.81E-03
69GO:0043023: ribosomal large subunit binding1.81E-03
70GO:0004351: glutamate decarboxylase activity1.81E-03
71GO:0005528: FK506 binding1.83E-03
72GO:0003723: RNA binding2.24E-03
73GO:0004185: serine-type carboxypeptidase activity2.24E-03
74GO:0070628: proteasome binding2.44E-03
75GO:0045430: chalcone isomerase activity2.44E-03
76GO:0009011: starch synthase activity2.44E-03
77GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity2.44E-03
78GO:0043495: protein anchor2.44E-03
79GO:0001053: plastid sigma factor activity2.44E-03
80GO:0004845: uracil phosphoribosyltransferase activity2.44E-03
81GO:0016987: sigma factor activity2.44E-03
82GO:0051287: NAD binding2.86E-03
83GO:0003959: NADPH dehydrogenase activity3.11E-03
84GO:0016773: phosphotransferase activity, alcohol group as acceptor3.11E-03
85GO:0005275: amine transmembrane transporter activity3.11E-03
86GO:0008374: O-acyltransferase activity3.11E-03
87GO:0031593: polyubiquitin binding3.85E-03
88GO:0004130: cytochrome-c peroxidase activity3.85E-03
89GO:0004556: alpha-amylase activity3.85E-03
90GO:0004366: glycerol-3-phosphate O-acyltransferase activity3.85E-03
91GO:0042578: phosphoric ester hydrolase activity3.85E-03
92GO:0004332: fructose-bisphosphate aldolase activity3.85E-03
93GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.23E-03
94GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity4.64E-03
95GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.64E-03
96GO:0004747: ribokinase activity4.64E-03
97GO:0005261: cation channel activity4.64E-03
98GO:0004124: cysteine synthase activity4.64E-03
99GO:0051082: unfolded protein binding5.14E-03
100GO:0019899: enzyme binding5.48E-03
101GO:0004033: aldo-keto reductase (NADP) activity6.37E-03
102GO:0008865: fructokinase activity6.37E-03
103GO:0016168: chlorophyll binding6.89E-03
104GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water7.30E-03
105GO:0008135: translation factor activity, RNA binding7.30E-03
106GO:0071949: FAD binding8.29E-03
107GO:0030955: potassium ion binding9.31E-03
108GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity9.31E-03
109GO:0004743: pyruvate kinase activity9.31E-03
110GO:0004222: metalloendopeptidase activity9.39E-03
111GO:0030234: enzyme regulator activity1.04E-02
112GO:0005089: Rho guanyl-nucleotide exchange factor activity1.15E-02
113GO:0004565: beta-galactosidase activity1.39E-02
114GO:0016787: hydrolase activity1.46E-02
115GO:0051537: 2 iron, 2 sulfur cluster binding1.51E-02
116GO:0031409: pigment binding1.77E-02
117GO:0005525: GTP binding1.78E-02
118GO:0004601: peroxidase activity1.80E-02
119GO:0003729: mRNA binding1.86E-02
120GO:0051536: iron-sulfur cluster binding1.90E-02
121GO:0043130: ubiquitin binding1.90E-02
122GO:0051087: chaperone binding2.04E-02
123GO:0005509: calcium ion binding2.21E-02
124GO:0022891: substrate-specific transmembrane transporter activity2.48E-02
125GO:0003727: single-stranded RNA binding2.63E-02
126GO:0003756: protein disulfide isomerase activity2.63E-02
127GO:0046933: proton-transporting ATP synthase activity, rotational mechanism3.11E-02
128GO:0008080: N-acetyltransferase activity3.11E-02
129GO:0005355: glucose transmembrane transporter activity3.27E-02
130GO:0050662: coenzyme binding3.27E-02
131GO:0004252: serine-type endopeptidase activity3.73E-02
132GO:0030170: pyridoxal phosphate binding3.73E-02
133GO:0003684: damaged DNA binding4.14E-02
134GO:0009055: electron carrier activity4.18E-02
135GO:0005200: structural constituent of cytoskeleton4.32E-02
136GO:0016597: amino acid binding4.50E-02
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Gene type



Gene DE type