co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G05860

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009606: tropism	0.00E+00
2	GO:0042794: rRNA transcription from plastid promoter	0.00E+00
3	GO:0042255: ribosome assembly	2.02E-05
4	GO:0006353: DNA-templated transcription, termination	2.02E-05
5	GO:1900033: negative regulation of trichome patterning	1.27E-04
6	GO:0018022: peptidyl-lysine methylation	1.27E-04
7	GO:1902290: positive regulation of defense response to oomycetes	3.17E-04
8	GO:0032502: developmental process	3.58E-04
9	GO:0048629: trichome patterning	4.24E-04
10	GO:0009416: response to light stimulus	4.26E-04
11	GO:0016131: brassinosteroid metabolic process	5.39E-04
12	GO:0042793: transcription from plastid promoter	6.60E-04
13	GO:0010315: auxin efflux	6.60E-04
14	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	7.87E-04
15	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	9.18E-04
16	GO:0048766: root hair initiation	1.06E-03
17	GO:0007389: pattern specification process	1.20E-03
18	GO:0009880: embryonic pattern specification	1.20E-03
19	GO:0007186: G-protein coupled receptor signaling pathway	1.20E-03
20	GO:0009245: lipid A biosynthetic process	1.35E-03
21	GO:0048364: root development	1.36E-03
22	GO:1900426: positive regulation of defense response to bacterium	1.50E-03
23	GO:0031627: telomeric loop formation	1.67E-03
24	GO:0010102: lateral root morphogenesis	2.19E-03
25	GO:0080147: root hair cell development	2.96E-03
26	GO:0006825: copper ion transport	3.16E-03
27	GO:0006874: cellular calcium ion homeostasis	3.16E-03
28	GO:0006306: DNA methylation	3.37E-03
29	GO:0008380: RNA splicing	3.79E-03
30	GO:0010082: regulation of root meristem growth	3.80E-03
31	GO:0006284: base-excision repair	4.03E-03
32	GO:0010051: xylem and phloem pattern formation	4.49E-03
33	GO:0048653: anther development	4.49E-03
34	GO:0009958: positive gravitropism	4.72E-03
35	GO:0046323: glucose import	4.72E-03
36	GO:0006342: chromatin silencing	4.72E-03
37	GO:0009741: response to brassinosteroid	4.72E-03
38	GO:0010268: brassinosteroid homeostasis	4.72E-03
39	GO:0009658: chloroplast organization	4.91E-03
40	GO:0007018: microtubule-based movement	4.96E-03
41	GO:0009791: post-embryonic development	5.21E-03
42	GO:0080156: mitochondrial mRNA modification	5.46E-03
43	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	5.46E-03
44	GO:0002229: defense response to oomycetes	5.46E-03
45	GO:0031047: gene silencing by RNA	5.71E-03
46	GO:0019761: glucosinolate biosynthetic process	5.71E-03
47	GO:0009630: gravitropism	5.71E-03
48	GO:0010252: auxin homeostasis	6.23E-03
49	GO:0009733: response to auxin	7.51E-03
50	GO:0048767: root hair elongation	8.76E-03
51	GO:0006811: ion transport	9.06E-03
52	GO:0030001: metal ion transport	1.09E-02
53	GO:0009926: auxin polar transport	1.19E-02
54	GO:0009734: auxin-activated signaling pathway	1.27E-02
55	GO:0031347: regulation of defense response	1.37E-02
56	GO:0048367: shoot system development	1.70E-02
57	GO:0051726: regulation of cell cycle	1.97E-02
58	GO:0006355: regulation of transcription, DNA-templated	2.02E-02
59	GO:0009790: embryo development	2.48E-02
60	GO:0006633: fatty acid biosynthetic process	2.61E-02
61	GO:0040008: regulation of growth	2.70E-02
62	GO:0006468: protein phosphorylation	2.70E-02
63	GO:0009617: response to bacterium	3.17E-02
64	GO:0010468: regulation of gene expression	3.17E-02
65	GO:0007049: cell cycle	4.12E-02
66	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0008395: steroid hydroxylase activity	5.18E-05
2	GO:0004016: adenylate cyclase activity	5.18E-05
3	GO:0003727: single-stranded RNA binding	2.12E-04
4	GO:0005354: galactose transmembrane transporter activity	3.17E-04
5	GO:0004930: G-protein coupled receptor activity	4.24E-04
6	GO:0016279: protein-lysine N-methyltransferase activity	4.24E-04
7	GO:0008725: DNA-3-methyladenine glycosylase activity	5.39E-04
8	GO:0031177: phosphopantetheine binding	6.60E-04
9	GO:0000035: acyl binding	7.87E-04
10	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.06E-03
11	GO:0003690: double-stranded DNA binding	1.37E-03
12	GO:0009672: auxin:proton symporter activity	1.50E-03
13	GO:0003691: double-stranded telomeric DNA binding	1.84E-03
14	GO:0010329: auxin efflux transmembrane transporter activity	2.19E-03
15	GO:0019843: rRNA binding	2.32E-03
16	GO:0005217: intracellular ligand-gated ion channel activity	2.56E-03
17	GO:0004970: ionotropic glutamate receptor activity	2.56E-03
18	GO:0008080: N-acetyltransferase activity	4.72E-03
19	GO:0005355: glucose transmembrane transporter activity	4.96E-03
20	GO:0019901: protein kinase binding	5.21E-03
21	GO:0051213: dioxygenase activity	7.04E-03
22	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	9.06E-03
23	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	9.99E-03
24	GO:0003777: microtubule motor activity	1.58E-02
25	GO:0004650: polygalacturonase activity	1.77E-02
26	GO:0004386: helicase activity	2.01E-02
27	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.26E-02
28	GO:0016829: lyase activity	2.35E-02
29	GO:0005516: calmodulin binding	2.41E-02
30	GO:0015144: carbohydrate transmembrane transporter activity	2.52E-02
31	GO:0005351: sugar:proton symporter activity	2.75E-02
32	GO:0044212: transcription regulatory region DNA binding	3.24E-02
33	GO:0016788: hydrolase activity, acting on ester bonds	3.86E-02
34	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.10E-02
35	GO:0052689: carboxylic ester hydrolase activity	4.77E-02
36	GO:0004674: protein serine/threonine kinase activity	4.80E-02