GO Enrichment Analysis of Co-expressed Genes with
AT1G04940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0015843: methylammonium transport | 0.00E+00 |
| 3 | GO:0097275: cellular ammonia homeostasis | 0.00E+00 |
| 4 | GO:0051924: regulation of calcium ion transport | 0.00E+00 |
| 5 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 6 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 7 | GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | 0.00E+00 |
| 8 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 9 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 10 | GO:0006002: fructose 6-phosphate metabolic process | 1.30E-04 |
| 11 | GO:0043087: regulation of GTPase activity | 1.48E-04 |
| 12 | GO:0043609: regulation of carbon utilization | 1.48E-04 |
| 13 | GO:0010493: Lewis a epitope biosynthetic process | 1.48E-04 |
| 14 | GO:0045036: protein targeting to chloroplast | 2.27E-04 |
| 15 | GO:0000160: phosphorelay signal transduction system | 2.56E-04 |
| 16 | GO:0006499: N-terminal protein myristoylation | 2.73E-04 |
| 17 | GO:0031648: protein destabilization | 3.38E-04 |
| 18 | GO:0042550: photosystem I stabilization | 3.38E-04 |
| 19 | GO:0006568: tryptophan metabolic process | 3.38E-04 |
| 20 | GO:0031537: regulation of anthocyanin metabolic process | 3.38E-04 |
| 21 | GO:0042325: regulation of phosphorylation | 3.38E-04 |
| 22 | GO:0019344: cysteine biosynthetic process | 5.43E-04 |
| 23 | GO:0031022: nuclear migration along microfilament | 5.54E-04 |
| 24 | GO:0019419: sulfate reduction | 5.54E-04 |
| 25 | GO:0006000: fructose metabolic process | 5.54E-04 |
| 26 | GO:0009736: cytokinin-activated signaling pathway | 6.67E-04 |
| 27 | GO:2001141: regulation of RNA biosynthetic process | 7.93E-04 |
| 28 | GO:0051639: actin filament network formation | 7.93E-04 |
| 29 | GO:0015696: ammonium transport | 7.93E-04 |
| 30 | GO:0051764: actin crosslink formation | 1.05E-03 |
| 31 | GO:0072488: ammonium transmembrane transport | 1.05E-03 |
| 32 | GO:0046656: folic acid biosynthetic process | 1.05E-03 |
| 33 | GO:0071368: cellular response to cytokinin stimulus | 1.33E-03 |
| 34 | GO:0009904: chloroplast accumulation movement | 1.33E-03 |
| 35 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.63E-03 |
| 36 | GO:0042793: transcription from plastid promoter | 1.63E-03 |
| 37 | GO:0080113: regulation of seed growth | 1.96E-03 |
| 38 | GO:0080036: regulation of cytokinin-activated signaling pathway | 1.96E-03 |
| 39 | GO:0042026: protein refolding | 1.96E-03 |
| 40 | GO:0006458: 'de novo' protein folding | 1.96E-03 |
| 41 | GO:0046654: tetrahydrofolate biosynthetic process | 1.96E-03 |
| 42 | GO:0009903: chloroplast avoidance movement | 1.96E-03 |
| 43 | GO:0030488: tRNA methylation | 1.96E-03 |
| 44 | GO:0009610: response to symbiotic fungus | 2.30E-03 |
| 45 | GO:0009396: folic acid-containing compound biosynthetic process | 2.30E-03 |
| 46 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.66E-03 |
| 47 | GO:0006402: mRNA catabolic process | 2.66E-03 |
| 48 | GO:0019375: galactolipid biosynthetic process | 2.66E-03 |
| 49 | GO:0071482: cellular response to light stimulus | 3.04E-03 |
| 50 | GO:0032544: plastid translation | 3.04E-03 |
| 51 | GO:0009735: response to cytokinin | 3.17E-03 |
| 52 | GO:0051865: protein autoubiquitination | 3.44E-03 |
| 53 | GO:0000373: Group II intron splicing | 3.44E-03 |
| 54 | GO:0009658: chloroplast organization | 3.56E-03 |
| 55 | GO:0009638: phototropism | 3.86E-03 |
| 56 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.86E-03 |
| 57 | GO:0031425: chloroplast RNA processing | 3.86E-03 |
| 58 | GO:0009299: mRNA transcription | 4.29E-03 |
| 59 | GO:0006535: cysteine biosynthetic process from serine | 4.29E-03 |
| 60 | GO:0000103: sulfate assimilation | 4.29E-03 |
| 61 | GO:0006352: DNA-templated transcription, initiation | 4.73E-03 |
| 62 | GO:0009725: response to hormone | 5.68E-03 |
| 63 | GO:2000012: regulation of auxin polar transport | 5.68E-03 |
| 64 | GO:0090351: seedling development | 6.67E-03 |
| 65 | GO:0009833: plant-type primary cell wall biogenesis | 7.20E-03 |
| 66 | GO:0080147: root hair cell development | 7.74E-03 |
| 67 | GO:0051017: actin filament bundle assembly | 7.74E-03 |
| 68 | GO:0009742: brassinosteroid mediated signaling pathway | 7.91E-03 |
| 69 | GO:0061077: chaperone-mediated protein folding | 8.85E-03 |
| 70 | GO:0031408: oxylipin biosynthetic process | 8.85E-03 |
| 71 | GO:0007005: mitochondrion organization | 9.43E-03 |
| 72 | GO:0006730: one-carbon metabolic process | 9.43E-03 |
| 73 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 9.43E-03 |
| 74 | GO:0010082: regulation of root meristem growth | 1.00E-02 |
| 75 | GO:0010214: seed coat development | 1.06E-02 |
| 76 | GO:0006633: fatty acid biosynthetic process | 1.18E-02 |
| 77 | GO:0080022: primary root development | 1.19E-02 |
| 78 | GO:0007018: microtubule-based movement | 1.32E-02 |
| 79 | GO:0000302: response to reactive oxygen species | 1.45E-02 |
| 80 | GO:0007166: cell surface receptor signaling pathway | 1.48E-02 |
| 81 | GO:0009738: abscisic acid-activated signaling pathway | 1.52E-02 |
| 82 | GO:0030163: protein catabolic process | 1.59E-02 |
| 83 | GO:0010027: thylakoid membrane organization | 1.89E-02 |
| 84 | GO:0010411: xyloglucan metabolic process | 2.12E-02 |
| 85 | GO:0030244: cellulose biosynthetic process | 2.28E-02 |
| 86 | GO:0009832: plant-type cell wall biogenesis | 2.36E-02 |
| 87 | GO:0006865: amino acid transport | 2.61E-02 |
| 88 | GO:0009637: response to blue light | 2.70E-02 |
| 89 | GO:0009867: jasmonic acid mediated signaling pathway | 2.70E-02 |
| 90 | GO:0006897: endocytosis | 3.05E-02 |
| 91 | GO:0010114: response to red light | 3.23E-02 |
| 92 | GO:0042546: cell wall biogenesis | 3.33E-02 |
| 93 | GO:0008643: carbohydrate transport | 3.42E-02 |
| 94 | GO:0006468: protein phosphorylation | 3.65E-02 |
| 95 | GO:0071555: cell wall organization | 3.84E-02 |
| 96 | GO:0009809: lignin biosynthetic process | 4.00E-02 |
| 97 | GO:0006486: protein glycosylation | 4.00E-02 |
| 98 | GO:0009585: red, far-red light phototransduction | 4.00E-02 |
| 99 | GO:0006096: glycolytic process | 4.50E-02 |
| 100 | GO:0048367: shoot system development | 4.61E-02 |
| 101 | GO:0009740: gibberellic acid mediated signaling pathway | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity | 0.00E+00 |
| 2 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 3 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 4 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 5 | GO:0000156: phosphorelay response regulator activity | 1.17E-04 |
| 6 | GO:0050139: nicotinate-N-glucosyltransferase activity | 1.48E-04 |
| 7 | GO:0046480: galactolipid galactosyltransferase activity | 1.48E-04 |
| 8 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.48E-04 |
| 9 | GO:0046920: alpha-(1->3)-fucosyltransferase activity | 1.48E-04 |
| 10 | GO:0004156: dihydropteroate synthase activity | 1.48E-04 |
| 11 | GO:0003848: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | 1.48E-04 |
| 12 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 1.48E-04 |
| 13 | GO:0046481: digalactosyldiacylglycerol synthase activity | 1.48E-04 |
| 14 | GO:0043425: bHLH transcription factor binding | 3.38E-04 |
| 15 | GO:0033741: adenylyl-sulfate reductase (glutathione) activity | 3.38E-04 |
| 16 | GO:0009973: adenylyl-sulfate reductase activity | 3.38E-04 |
| 17 | GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity | 3.38E-04 |
| 18 | GO:0050017: L-3-cyanoalanine synthase activity | 3.38E-04 |
| 19 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 5.54E-04 |
| 20 | GO:0046524: sucrose-phosphate synthase activity | 5.54E-04 |
| 21 | GO:0035250: UDP-galactosyltransferase activity | 7.93E-04 |
| 22 | GO:0001053: plastid sigma factor activity | 1.05E-03 |
| 23 | GO:0016987: sigma factor activity | 1.05E-03 |
| 24 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.33E-03 |
| 25 | GO:0008519: ammonium transmembrane transporter activity | 1.63E-03 |
| 26 | GO:2001070: starch binding | 1.63E-03 |
| 27 | GO:0004124: cysteine synthase activity | 1.96E-03 |
| 28 | GO:0008195: phosphatidate phosphatase activity | 1.96E-03 |
| 29 | GO:0003872: 6-phosphofructokinase activity | 2.30E-03 |
| 30 | GO:0008173: RNA methyltransferase activity | 3.04E-03 |
| 31 | GO:0008417: fucosyltransferase activity | 3.44E-03 |
| 32 | GO:0004713: protein tyrosine kinase activity | 4.29E-03 |
| 33 | GO:0044183: protein binding involved in protein folding | 4.73E-03 |
| 34 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 4.73E-03 |
| 35 | GO:0004089: carbonate dehydratase activity | 5.68E-03 |
| 36 | GO:0019888: protein phosphatase regulator activity | 5.68E-03 |
| 37 | GO:0009982: pseudouridine synthase activity | 5.68E-03 |
| 38 | GO:0004190: aspartic-type endopeptidase activity | 6.67E-03 |
| 39 | GO:0005525: GTP binding | 7.72E-03 |
| 40 | GO:0005345: purine nucleobase transmembrane transporter activity | 8.29E-03 |
| 41 | GO:0004176: ATP-dependent peptidase activity | 8.85E-03 |
| 42 | GO:0003964: RNA-directed DNA polymerase activity | 8.85E-03 |
| 43 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.00E-02 |
| 44 | GO:0008514: organic anion transmembrane transporter activity | 1.06E-02 |
| 45 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.21E-02 |
| 46 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.45E-02 |
| 47 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.59E-02 |
| 48 | GO:0051015: actin filament binding | 1.59E-02 |
| 49 | GO:0016759: cellulose synthase activity | 1.67E-02 |
| 50 | GO:0008237: metallopeptidase activity | 1.74E-02 |
| 51 | GO:0004672: protein kinase activity | 1.88E-02 |
| 52 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.12E-02 |
| 53 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.28E-02 |
| 54 | GO:0016757: transferase activity, transferring glycosyl groups | 2.29E-02 |
| 55 | GO:0005096: GTPase activator activity | 2.36E-02 |
| 56 | GO:0003746: translation elongation factor activity | 2.70E-02 |
| 57 | GO:0003993: acid phosphatase activity | 2.79E-02 |
| 58 | GO:0042803: protein homodimerization activity | 3.12E-02 |
| 59 | GO:0043621: protein self-association | 3.42E-02 |
| 60 | GO:0035091: phosphatidylinositol binding | 3.42E-02 |
| 61 | GO:0003924: GTPase activity | 3.67E-02 |
| 62 | GO:0003723: RNA binding | 3.71E-02 |
| 63 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.00E-02 |
| 64 | GO:0004674: protein serine/threonine kinase activity | 4.22E-02 |
| 65 | GO:0003777: microtubule motor activity | 4.30E-02 |
| 66 | GO:0015171: amino acid transmembrane transporter activity | 4.30E-02 |
| 67 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.81E-02 |
| 68 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.81E-02 |