GO Enrichment Analysis of Co-expressed Genes with
AT1G04640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 2 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 3 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 4 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 5 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 6 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 7 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 8 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 9 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 10 | GO:0071482: cellular response to light stimulus | 4.54E-06 |
| 11 | GO:0010190: cytochrome b6f complex assembly | 7.36E-05 |
| 12 | GO:0015671: oxygen transport | 2.06E-04 |
| 13 | GO:0042547: cell wall modification involved in multidimensional cell growth | 2.06E-04 |
| 14 | GO:1901135: carbohydrate derivative metabolic process | 2.06E-04 |
| 15 | GO:0000476: maturation of 4.5S rRNA | 2.06E-04 |
| 16 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.06E-04 |
| 17 | GO:0000967: rRNA 5'-end processing | 2.06E-04 |
| 18 | GO:0019432: triglyceride biosynthetic process | 2.61E-04 |
| 19 | GO:0010027: thylakoid membrane organization | 3.13E-04 |
| 20 | GO:0006352: DNA-templated transcription, initiation | 4.23E-04 |
| 21 | GO:0006415: translational termination | 4.23E-04 |
| 22 | GO:0019684: photosynthesis, light reaction | 4.23E-04 |
| 23 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.23E-04 |
| 24 | GO:0000256: allantoin catabolic process | 4.62E-04 |
| 25 | GO:0051262: protein tetramerization | 4.62E-04 |
| 26 | GO:0034470: ncRNA processing | 4.62E-04 |
| 27 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 4.62E-04 |
| 28 | GO:0010198: synergid death | 4.62E-04 |
| 29 | GO:0006435: threonyl-tRNA aminoacylation | 4.62E-04 |
| 30 | GO:1900871: chloroplast mRNA modification | 4.62E-04 |
| 31 | GO:0005983: starch catabolic process | 4.85E-04 |
| 32 | GO:0010207: photosystem II assembly | 6.19E-04 |
| 33 | GO:0015940: pantothenate biosynthetic process | 7.52E-04 |
| 34 | GO:0045493: xylan catabolic process | 7.52E-04 |
| 35 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 7.52E-04 |
| 36 | GO:0010136: ureide catabolic process | 7.52E-04 |
| 37 | GO:2001141: regulation of RNA biosynthetic process | 1.07E-03 |
| 38 | GO:0009102: biotin biosynthetic process | 1.07E-03 |
| 39 | GO:0046653: tetrahydrofolate metabolic process | 1.07E-03 |
| 40 | GO:0010239: chloroplast mRNA processing | 1.07E-03 |
| 41 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.07E-03 |
| 42 | GO:0006145: purine nucleobase catabolic process | 1.07E-03 |
| 43 | GO:0071483: cellular response to blue light | 1.43E-03 |
| 44 | GO:0016117: carotenoid biosynthetic process | 1.43E-03 |
| 45 | GO:0009765: photosynthesis, light harvesting | 1.43E-03 |
| 46 | GO:0022622: root system development | 1.43E-03 |
| 47 | GO:0046907: intracellular transport | 1.81E-03 |
| 48 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.81E-03 |
| 49 | GO:0016123: xanthophyll biosynthetic process | 1.81E-03 |
| 50 | GO:0016120: carotene biosynthetic process | 1.81E-03 |
| 51 | GO:0080110: sporopollenin biosynthetic process | 1.81E-03 |
| 52 | GO:0016554: cytidine to uridine editing | 2.24E-03 |
| 53 | GO:0032973: amino acid export | 2.24E-03 |
| 54 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.24E-03 |
| 55 | GO:0030488: tRNA methylation | 2.69E-03 |
| 56 | GO:0034389: lipid particle organization | 2.69E-03 |
| 57 | GO:1901259: chloroplast rRNA processing | 2.69E-03 |
| 58 | GO:0032880: regulation of protein localization | 3.16E-03 |
| 59 | GO:0043090: amino acid import | 3.16E-03 |
| 60 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 3.16E-03 |
| 61 | GO:0006605: protein targeting | 3.67E-03 |
| 62 | GO:0000105: histidine biosynthetic process | 3.67E-03 |
| 63 | GO:0006353: DNA-templated transcription, termination | 3.67E-03 |
| 64 | GO:0032544: plastid translation | 4.20E-03 |
| 65 | GO:0017004: cytochrome complex assembly | 4.20E-03 |
| 66 | GO:0022900: electron transport chain | 4.20E-03 |
| 67 | GO:0009657: plastid organization | 4.20E-03 |
| 68 | GO:0007568: aging | 4.42E-03 |
| 69 | GO:0009821: alkaloid biosynthetic process | 4.75E-03 |
| 70 | GO:0010206: photosystem II repair | 4.75E-03 |
| 71 | GO:0080144: amino acid homeostasis | 4.75E-03 |
| 72 | GO:0045087: innate immune response | 4.84E-03 |
| 73 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.32E-03 |
| 74 | GO:1900865: chloroplast RNA modification | 5.32E-03 |
| 75 | GO:0006631: fatty acid metabolic process | 5.75E-03 |
| 76 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.93E-03 |
| 77 | GO:0042254: ribosome biogenesis | 6.64E-03 |
| 78 | GO:0016024: CDP-diacylglycerol biosynthetic process | 7.20E-03 |
| 79 | GO:0009725: response to hormone | 7.87E-03 |
| 80 | GO:0009767: photosynthetic electron transport chain | 7.87E-03 |
| 81 | GO:2000012: regulation of auxin polar transport | 7.87E-03 |
| 82 | GO:0090351: seedling development | 9.27E-03 |
| 83 | GO:0006071: glycerol metabolic process | 1.00E-02 |
| 84 | GO:0000162: tryptophan biosynthetic process | 1.00E-02 |
| 85 | GO:0015979: photosynthesis | 1.01E-02 |
| 86 | GO:0016575: histone deacetylation | 1.15E-02 |
| 87 | GO:0048511: rhythmic process | 1.23E-02 |
| 88 | GO:0061077: chaperone-mediated protein folding | 1.23E-02 |
| 89 | GO:0031348: negative regulation of defense response | 1.32E-02 |
| 90 | GO:0080092: regulation of pollen tube growth | 1.32E-02 |
| 91 | GO:0019748: secondary metabolic process | 1.32E-02 |
| 92 | GO:0009814: defense response, incompatible interaction | 1.32E-02 |
| 93 | GO:0009306: protein secretion | 1.48E-02 |
| 94 | GO:0010584: pollen exine formation | 1.48E-02 |
| 95 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.57E-02 |
| 96 | GO:0051028: mRNA transport | 1.57E-02 |
| 97 | GO:0008284: positive regulation of cell proliferation | 1.57E-02 |
| 98 | GO:0006412: translation | 1.72E-02 |
| 99 | GO:0009958: positive gravitropism | 1.75E-02 |
| 100 | GO:0042752: regulation of circadian rhythm | 1.84E-02 |
| 101 | GO:0055114: oxidation-reduction process | 2.49E-02 |
| 102 | GO:0016126: sterol biosynthetic process | 2.64E-02 |
| 103 | GO:0009627: systemic acquired resistance | 2.86E-02 |
| 104 | GO:0015995: chlorophyll biosynthetic process | 2.97E-02 |
| 105 | GO:0010411: xyloglucan metabolic process | 2.97E-02 |
| 106 | GO:0015031: protein transport | 3.07E-02 |
| 107 | GO:0016311: dephosphorylation | 3.08E-02 |
| 108 | GO:0009658: chloroplast organization | 3.22E-02 |
| 109 | GO:0048527: lateral root development | 3.54E-02 |
| 110 | GO:0006508: proteolysis | 4.25E-02 |
| 111 | GO:0009744: response to sucrose | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 2 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 3 | GO:0003858: 3-hydroxybutyrate dehydrogenase activity | 0.00E+00 |
| 4 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 5 | GO:0005048: signal sequence binding | 0.00E+00 |
| 6 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 7 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 8 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 9 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 10 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 11 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 12 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 13 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 14 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 15 | GO:0008115: sarcosine oxidase activity | 0.00E+00 |
| 16 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 17 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.01E-06 |
| 18 | GO:0070402: NADPH binding | 7.40E-06 |
| 19 | GO:0016149: translation release factor activity, codon specific | 1.69E-05 |
| 20 | GO:0001053: plastid sigma factor activity | 3.11E-05 |
| 21 | GO:0016987: sigma factor activity | 3.11E-05 |
| 22 | GO:0005528: FK506 binding | 4.88E-05 |
| 23 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.16E-04 |
| 24 | GO:0019203: carbohydrate phosphatase activity | 2.06E-04 |
| 25 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 2.06E-04 |
| 26 | GO:0005344: oxygen transporter activity | 2.06E-04 |
| 27 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 2.06E-04 |
| 28 | GO:0005227: calcium activated cation channel activity | 2.06E-04 |
| 29 | GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | 2.06E-04 |
| 30 | GO:0097367: carbohydrate derivative binding | 2.06E-04 |
| 31 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.06E-04 |
| 32 | GO:0050308: sugar-phosphatase activity | 2.06E-04 |
| 33 | GO:0004856: xylulokinase activity | 2.06E-04 |
| 34 | GO:0009496: plastoquinol--plastocyanin reductase activity | 2.06E-04 |
| 35 | GO:0003747: translation release factor activity | 2.61E-04 |
| 36 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 4.62E-04 |
| 37 | GO:0004829: threonine-tRNA ligase activity | 4.62E-04 |
| 38 | GO:0030267: glyoxylate reductase (NADP) activity | 7.52E-04 |
| 39 | GO:0004180: carboxypeptidase activity | 7.52E-04 |
| 40 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 7.52E-04 |
| 41 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.07E-03 |
| 42 | GO:0016851: magnesium chelatase activity | 1.07E-03 |
| 43 | GO:0048487: beta-tubulin binding | 1.07E-03 |
| 44 | GO:0004792: thiosulfate sulfurtransferase activity | 1.07E-03 |
| 45 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.43E-03 |
| 46 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.43E-03 |
| 47 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.43E-03 |
| 48 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 1.43E-03 |
| 49 | GO:0008374: O-acyltransferase activity | 1.81E-03 |
| 50 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.81E-03 |
| 51 | GO:0004040: amidase activity | 1.81E-03 |
| 52 | GO:2001070: starch binding | 2.24E-03 |
| 53 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.24E-03 |
| 54 | GO:0004144: diacylglycerol O-acyltransferase activity | 2.69E-03 |
| 55 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.69E-03 |
| 56 | GO:0005261: cation channel activity | 2.69E-03 |
| 57 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.69E-03 |
| 58 | GO:0008236: serine-type peptidase activity | 3.63E-03 |
| 59 | GO:0008312: 7S RNA binding | 3.67E-03 |
| 60 | GO:0004033: aldo-keto reductase (NADP) activity | 3.67E-03 |
| 61 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 4.20E-03 |
| 62 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 4.75E-03 |
| 63 | GO:0016844: strictosidine synthase activity | 5.32E-03 |
| 64 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 6.55E-03 |
| 65 | GO:0051537: 2 iron, 2 sulfur cluster binding | 6.74E-03 |
| 66 | GO:0043621: protein self-association | 6.74E-03 |
| 67 | GO:0031072: heat shock protein binding | 7.87E-03 |
| 68 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 8.40E-03 |
| 69 | GO:0008266: poly(U) RNA binding | 8.56E-03 |
| 70 | GO:0008083: growth factor activity | 8.56E-03 |
| 71 | GO:0051536: iron-sulfur cluster binding | 1.08E-02 |
| 72 | GO:0004407: histone deacetylase activity | 1.08E-02 |
| 73 | GO:0004176: ATP-dependent peptidase activity | 1.23E-02 |
| 74 | GO:0030570: pectate lyase activity | 1.40E-02 |
| 75 | GO:0003756: protein disulfide isomerase activity | 1.48E-02 |
| 76 | GO:0019843: rRNA binding | 1.50E-02 |
| 77 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.54E-02 |
| 78 | GO:0003723: RNA binding | 1.68E-02 |
| 79 | GO:0008080: N-acetyltransferase activity | 1.75E-02 |
| 80 | GO:0016853: isomerase activity | 1.84E-02 |
| 81 | GO:0050662: coenzyme binding | 1.84E-02 |
| 82 | GO:0005509: calcium ion binding | 1.91E-02 |
| 83 | GO:0004872: receptor activity | 1.94E-02 |
| 84 | GO:0048038: quinone binding | 2.03E-02 |
| 85 | GO:0003735: structural constituent of ribosome | 2.07E-02 |
| 86 | GO:0008483: transaminase activity | 2.43E-02 |
| 87 | GO:0004721: phosphoprotein phosphatase activity | 2.97E-02 |
| 88 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.19E-02 |
| 89 | GO:0016491: oxidoreductase activity | 3.23E-02 |
| 90 | GO:0016788: hydrolase activity, acting on ester bonds | 3.28E-02 |
| 91 | GO:0004222: metalloendopeptidase activity | 3.42E-02 |
| 92 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.54E-02 |
| 93 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.78E-02 |
| 94 | GO:0003746: translation elongation factor activity | 3.78E-02 |
| 95 | GO:0003729: mRNA binding | 3.85E-02 |
| 96 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.15E-02 |
| 97 | GO:0004185: serine-type carboxypeptidase activity | 4.52E-02 |