GO Enrichment Analysis of Co-expressed Genes with
AT1G04420
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 2 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 3 | GO:0035998: 7,8-dihydroneopterin 3'-triphosphate biosynthetic process | 0.00E+00 |
| 4 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 5 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 6 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 7 | GO:0015995: chlorophyll biosynthetic process | 3.10E-13 |
| 8 | GO:0015979: photosynthesis | 3.36E-13 |
| 9 | GO:0032544: plastid translation | 5.27E-08 |
| 10 | GO:0010021: amylopectin biosynthetic process | 1.94E-07 |
| 11 | GO:0006729: tetrahydrobiopterin biosynthetic process | 2.32E-06 |
| 12 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.32E-06 |
| 13 | GO:0009658: chloroplast organization | 3.10E-06 |
| 14 | GO:0006000: fructose metabolic process | 8.46E-06 |
| 15 | GO:0019252: starch biosynthetic process | 9.99E-06 |
| 16 | GO:0009735: response to cytokinin | 1.21E-05 |
| 17 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.93E-05 |
| 18 | GO:0006094: gluconeogenesis | 2.77E-05 |
| 19 | GO:0045727: positive regulation of translation | 3.53E-05 |
| 20 | GO:0010600: regulation of auxin biosynthetic process | 3.53E-05 |
| 21 | GO:0018298: protein-chromophore linkage | 4.24E-05 |
| 22 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.72E-05 |
| 23 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.15E-04 |
| 24 | GO:0010928: regulation of auxin mediated signaling pathway | 1.94E-04 |
| 25 | GO:0009704: de-etiolation | 1.94E-04 |
| 26 | GO:0034337: RNA folding | 2.22E-04 |
| 27 | GO:0043953: protein transport by the Tat complex | 2.22E-04 |
| 28 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 2.22E-04 |
| 29 | GO:0071277: cellular response to calcium ion | 2.22E-04 |
| 30 | GO:0043489: RNA stabilization | 2.22E-04 |
| 31 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.22E-04 |
| 32 | GO:1904964: positive regulation of phytol biosynthetic process | 2.22E-04 |
| 33 | GO:0065002: intracellular protein transmembrane transport | 2.22E-04 |
| 34 | GO:0006002: fructose 6-phosphate metabolic process | 2.40E-04 |
| 35 | GO:0006783: heme biosynthetic process | 2.91E-04 |
| 36 | GO:0010027: thylakoid membrane organization | 3.60E-04 |
| 37 | GO:0055114: oxidation-reduction process | 4.20E-04 |
| 38 | GO:0006412: translation | 4.34E-04 |
| 39 | GO:0009773: photosynthetic electron transport in photosystem I | 4.69E-04 |
| 40 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.69E-04 |
| 41 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 4.95E-04 |
| 42 | GO:0005986: sucrose biosynthetic process | 6.09E-04 |
| 43 | GO:0010207: photosystem II assembly | 6.86E-04 |
| 44 | GO:0019253: reductive pentose-phosphate cycle | 6.86E-04 |
| 45 | GO:0005977: glycogen metabolic process | 8.05E-04 |
| 46 | GO:0006518: peptide metabolic process | 8.05E-04 |
| 47 | GO:0034051: negative regulation of plant-type hypersensitive response | 8.05E-04 |
| 48 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.53E-04 |
| 49 | GO:0006020: inositol metabolic process | 1.15E-03 |
| 50 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.15E-03 |
| 51 | GO:0009152: purine ribonucleotide biosynthetic process | 1.15E-03 |
| 52 | GO:0046653: tetrahydrofolate metabolic process | 1.15E-03 |
| 53 | GO:0006241: CTP biosynthetic process | 1.15E-03 |
| 54 | GO:0006165: nucleoside diphosphate phosphorylation | 1.15E-03 |
| 55 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.15E-03 |
| 56 | GO:0033014: tetrapyrrole biosynthetic process | 1.15E-03 |
| 57 | GO:0006228: UTP biosynthetic process | 1.15E-03 |
| 58 | GO:0010731: protein glutathionylation | 1.15E-03 |
| 59 | GO:1901332: negative regulation of lateral root development | 1.15E-03 |
| 60 | GO:0006986: response to unfolded protein | 1.15E-03 |
| 61 | GO:0006364: rRNA processing | 1.36E-03 |
| 62 | GO:0009585: red, far-red light phototransduction | 1.36E-03 |
| 63 | GO:0006109: regulation of carbohydrate metabolic process | 1.53E-03 |
| 64 | GO:0006183: GTP biosynthetic process | 1.53E-03 |
| 65 | GO:0006536: glutamate metabolic process | 1.53E-03 |
| 66 | GO:0006021: inositol biosynthetic process | 1.53E-03 |
| 67 | GO:0042631: cellular response to water deprivation | 1.71E-03 |
| 68 | GO:0009107: lipoate biosynthetic process | 1.95E-03 |
| 69 | GO:0000304: response to singlet oxygen | 1.95E-03 |
| 70 | GO:0043097: pyrimidine nucleoside salvage | 1.95E-03 |
| 71 | GO:0006206: pyrimidine nucleobase metabolic process | 2.40E-03 |
| 72 | GO:0046855: inositol phosphate dephosphorylation | 2.40E-03 |
| 73 | GO:1901259: chloroplast rRNA processing | 2.89E-03 |
| 74 | GO:0046654: tetrahydrofolate biosynthetic process | 2.89E-03 |
| 75 | GO:0009854: oxidative photosynthetic carbon pathway | 2.89E-03 |
| 76 | GO:0009058: biosynthetic process | 3.03E-03 |
| 77 | GO:0010161: red light signaling pathway | 3.40E-03 |
| 78 | GO:0009772: photosynthetic electron transport in photosystem II | 3.40E-03 |
| 79 | GO:1900057: positive regulation of leaf senescence | 3.40E-03 |
| 80 | GO:0009645: response to low light intensity stimulus | 3.40E-03 |
| 81 | GO:0006633: fatty acid biosynthetic process | 3.78E-03 |
| 82 | GO:0048564: photosystem I assembly | 3.94E-03 |
| 83 | GO:0005978: glycogen biosynthetic process | 3.94E-03 |
| 84 | GO:0009642: response to light intensity | 3.94E-03 |
| 85 | GO:0009817: defense response to fungus, incompatible interaction | 4.25E-03 |
| 86 | GO:0071482: cellular response to light stimulus | 4.51E-03 |
| 87 | GO:0006526: arginine biosynthetic process | 4.51E-03 |
| 88 | GO:0006810: transport | 4.67E-03 |
| 89 | GO:0010218: response to far red light | 4.68E-03 |
| 90 | GO:0090333: regulation of stomatal closure | 5.11E-03 |
| 91 | GO:0006754: ATP biosynthetic process | 5.11E-03 |
| 92 | GO:0009637: response to blue light | 5.38E-03 |
| 93 | GO:0009853: photorespiration | 5.38E-03 |
| 94 | GO:0034599: cellular response to oxidative stress | 5.62E-03 |
| 95 | GO:0005982: starch metabolic process | 5.74E-03 |
| 96 | GO:0010205: photoinhibition | 5.74E-03 |
| 97 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.74E-03 |
| 98 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.38E-03 |
| 99 | GO:0010114: response to red light | 6.93E-03 |
| 100 | GO:0019684: photosynthesis, light reaction | 7.06E-03 |
| 101 | GO:0043085: positive regulation of catalytic activity | 7.06E-03 |
| 102 | GO:0000272: polysaccharide catabolic process | 7.06E-03 |
| 103 | GO:0009750: response to fructose | 7.06E-03 |
| 104 | GO:0042254: ribosome biogenesis | 7.60E-03 |
| 105 | GO:0042742: defense response to bacterium | 7.60E-03 |
| 106 | GO:0006790: sulfur compound metabolic process | 7.76E-03 |
| 107 | GO:0005983: starch catabolic process | 7.76E-03 |
| 108 | GO:0018107: peptidyl-threonine phosphorylation | 8.48E-03 |
| 109 | GO:0009767: photosynthetic electron transport chain | 8.48E-03 |
| 110 | GO:0006807: nitrogen compound metabolic process | 8.48E-03 |
| 111 | GO:0009266: response to temperature stimulus | 9.23E-03 |
| 112 | GO:0046854: phosphatidylinositol phosphorylation | 1.00E-02 |
| 113 | GO:0019762: glucosinolate catabolic process | 1.08E-02 |
| 114 | GO:0000027: ribosomal large subunit assembly | 1.16E-02 |
| 115 | GO:0007017: microtubule-based process | 1.24E-02 |
| 116 | GO:0009409: response to cold | 1.29E-02 |
| 117 | GO:0031408: oxylipin biosynthetic process | 1.33E-02 |
| 118 | GO:0019748: secondary metabolic process | 1.42E-02 |
| 119 | GO:0010017: red or far-red light signaling pathway | 1.42E-02 |
| 120 | GO:0016226: iron-sulfur cluster assembly | 1.42E-02 |
| 121 | GO:0035428: hexose transmembrane transport | 1.42E-02 |
| 122 | GO:0009625: response to insect | 1.51E-02 |
| 123 | GO:0009693: ethylene biosynthetic process | 1.51E-02 |
| 124 | GO:0009411: response to UV | 1.51E-02 |
| 125 | GO:0005975: carbohydrate metabolic process | 1.57E-02 |
| 126 | GO:0009561: megagametogenesis | 1.60E-02 |
| 127 | GO:0006606: protein import into nucleus | 1.79E-02 |
| 128 | GO:0046323: glucose import | 1.89E-02 |
| 129 | GO:0006520: cellular amino acid metabolic process | 1.89E-02 |
| 130 | GO:0006662: glycerol ether metabolic process | 1.89E-02 |
| 131 | GO:0015986: ATP synthesis coupled proton transport | 1.99E-02 |
| 132 | GO:0000302: response to reactive oxygen species | 2.19E-02 |
| 133 | GO:0009734: auxin-activated signaling pathway | 2.47E-02 |
| 134 | GO:0009567: double fertilization forming a zygote and endosperm | 2.52E-02 |
| 135 | GO:0006950: response to stress | 3.20E-02 |
| 136 | GO:0016311: dephosphorylation | 3.32E-02 |
| 137 | GO:0010311: lateral root formation | 3.57E-02 |
| 138 | GO:0007568: aging | 3.82E-02 |
| 139 | GO:0009631: cold acclimation | 3.82E-02 |
| 140 | GO:0045087: innate immune response | 4.08E-02 |
| 141 | GO:0016051: carbohydrate biosynthetic process | 4.08E-02 |
| 142 | GO:0042542: response to hydrogen peroxide | 4.74E-02 |
| 143 | GO:0044550: secondary metabolite biosynthetic process | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 2 | GO:0090711: FMN hydrolase activity | 0.00E+00 |
| 3 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 4 | GO:0003934: GTP cyclohydrolase I activity | 0.00E+00 |
| 5 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 6 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 7 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 8 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 9 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 10 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 11 | GO:0019843: rRNA binding | 1.20E-11 |
| 12 | GO:0016851: magnesium chelatase activity | 6.63E-08 |
| 13 | GO:0008266: poly(U) RNA binding | 7.09E-07 |
| 14 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.32E-06 |
| 15 | GO:0016168: chlorophyll binding | 2.78E-05 |
| 16 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.53E-05 |
| 17 | GO:0031409: pigment binding | 4.88E-05 |
| 18 | GO:0003735: structural constituent of ribosome | 6.19E-05 |
| 19 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 2.22E-04 |
| 20 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 2.22E-04 |
| 21 | GO:0016776: phosphotransferase activity, phosphate group as acceptor | 2.22E-04 |
| 22 | GO:0004325: ferrochelatase activity | 2.22E-04 |
| 23 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.22E-04 |
| 24 | GO:0045485: omega-6 fatty acid desaturase activity | 2.22E-04 |
| 25 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 2.22E-04 |
| 26 | GO:0005080: protein kinase C binding | 2.22E-04 |
| 27 | GO:0042389: omega-3 fatty acid desaturase activity | 4.95E-04 |
| 28 | GO:0010297: heteropolysaccharide binding | 4.95E-04 |
| 29 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 4.95E-04 |
| 30 | GO:0052832: inositol monophosphate 3-phosphatase activity | 4.95E-04 |
| 31 | GO:0033201: alpha-1,4-glucan synthase activity | 4.95E-04 |
| 32 | GO:0008934: inositol monophosphate 1-phosphatase activity | 4.95E-04 |
| 33 | GO:0052833: inositol monophosphate 4-phosphatase activity | 4.95E-04 |
| 34 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 4.95E-04 |
| 35 | GO:0016630: protochlorophyllide reductase activity | 4.95E-04 |
| 36 | GO:0019156: isoamylase activity | 4.95E-04 |
| 37 | GO:0031072: heat shock protein binding | 6.09E-04 |
| 38 | GO:0008864: formyltetrahydrofolate deformylase activity | 8.05E-04 |
| 39 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 8.05E-04 |
| 40 | GO:0043169: cation binding | 8.05E-04 |
| 41 | GO:0004373: glycogen (starch) synthase activity | 8.05E-04 |
| 42 | GO:0016992: lipoate synthase activity | 8.05E-04 |
| 43 | GO:0004751: ribose-5-phosphate isomerase activity | 8.05E-04 |
| 44 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 8.05E-04 |
| 45 | GO:0016787: hydrolase activity | 1.04E-03 |
| 46 | GO:0016491: oxidoreductase activity | 1.12E-03 |
| 47 | GO:0004351: glutamate decarboxylase activity | 1.15E-03 |
| 48 | GO:0004550: nucleoside diphosphate kinase activity | 1.15E-03 |
| 49 | GO:0043023: ribosomal large subunit binding | 1.15E-03 |
| 50 | GO:0043495: protein anchor | 1.53E-03 |
| 51 | GO:0009011: starch synthase activity | 1.53E-03 |
| 52 | GO:0003959: NADPH dehydrogenase activity | 1.95E-03 |
| 53 | GO:0050662: coenzyme binding | 1.97E-03 |
| 54 | GO:0051082: unfolded protein binding | 2.13E-03 |
| 55 | GO:0048038: quinone binding | 2.26E-03 |
| 56 | GO:0004332: fructose-bisphosphate aldolase activity | 2.40E-03 |
| 57 | GO:0004130: cytochrome-c peroxidase activity | 2.40E-03 |
| 58 | GO:0042578: phosphoric ester hydrolase activity | 2.40E-03 |
| 59 | GO:0004556: alpha-amylase activity | 2.40E-03 |
| 60 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.89E-03 |
| 61 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.89E-03 |
| 62 | GO:0004849: uridine kinase activity | 2.89E-03 |
| 63 | GO:0019899: enzyme binding | 3.40E-03 |
| 64 | GO:0046872: metal ion binding | 3.82E-03 |
| 65 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 4.51E-03 |
| 66 | GO:0004222: metalloendopeptidase activity | 4.68E-03 |
| 67 | GO:0071949: FAD binding | 5.11E-03 |
| 68 | GO:0003746: translation elongation factor activity | 5.38E-03 |
| 69 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 5.74E-03 |
| 70 | GO:0030234: enzyme regulator activity | 6.38E-03 |
| 71 | GO:0008047: enzyme activator activity | 6.38E-03 |
| 72 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.10E-03 |
| 73 | GO:0051287: NAD binding | 8.40E-03 |
| 74 | GO:0004565: beta-galactosidase activity | 8.48E-03 |
| 75 | GO:0003824: catalytic activity | 8.94E-03 |
| 76 | GO:0051536: iron-sulfur cluster binding | 1.16E-02 |
| 77 | GO:0004857: enzyme inhibitor activity | 1.16E-02 |
| 78 | GO:0005528: FK506 binding | 1.16E-02 |
| 79 | GO:0051087: chaperone binding | 1.24E-02 |
| 80 | GO:0022891: substrate-specific transmembrane transporter activity | 1.51E-02 |
| 81 | GO:0003729: mRNA binding | 1.51E-02 |
| 82 | GO:0047134: protein-disulfide reductase activity | 1.70E-02 |
| 83 | GO:0005525: GTP binding | 1.85E-02 |
| 84 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.89E-02 |
| 85 | GO:0004791: thioredoxin-disulfide reductase activity | 1.99E-02 |
| 86 | GO:0005355: glucose transmembrane transporter activity | 1.99E-02 |
| 87 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.41E-02 |
| 88 | GO:0005200: structural constituent of cytoskeleton | 2.63E-02 |
| 89 | GO:0016887: ATPase activity | 2.78E-02 |
| 90 | GO:0042802: identical protein binding | 2.94E-02 |
| 91 | GO:0004721: phosphoprotein phosphatase activity | 3.20E-02 |
| 92 | GO:0008168: methyltransferase activity | 3.45E-02 |
| 93 | GO:0005515: protein binding | 3.51E-02 |
| 94 | GO:0004601: peroxidase activity | 3.58E-02 |
| 95 | GO:0004364: glutathione transferase activity | 4.74E-02 |
| 96 | GO:0004185: serine-type carboxypeptidase activity | 4.88E-02 |