Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G03290

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006858: extracellular transport0.00E+00
2GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
3GO:0010401: pectic galactan metabolic process0.00E+00
4GO:0006497: protein lipidation0.00E+00
5GO:0072722: response to amitrole0.00E+00
6GO:0010055: atrichoblast differentiation0.00E+00
7GO:0006654: phosphatidic acid biosynthetic process0.00E+00
8GO:0043132: NAD transport1.05E-05
9GO:0010104: regulation of ethylene-activated signaling pathway7.70E-05
10GO:0015031: protein transport2.11E-04
11GO:0009225: nucleotide-sugar metabolic process2.25E-04
12GO:0003006: developmental process involved in reproduction2.90E-04
13GO:0060918: auxin transport2.90E-04
14GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.89E-04
15GO:0009814: defense response, incompatible interaction4.44E-04
16GO:0035352: NAD transmembrane transport4.90E-04
17GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.90E-04
18GO:0006680: glucosylceramide catabolic process4.90E-04
19GO:0032491: detection of molecule of fungal origin4.90E-04
20GO:0060862: negative regulation of floral organ abscission4.90E-04
21GO:0019605: butyrate metabolic process4.90E-04
22GO:0006083: acetate metabolic process4.90E-04
23GO:0042964: thioredoxin reduction4.90E-04
24GO:0032107: regulation of response to nutrient levels4.90E-04
25GO:0016337: single organismal cell-cell adhesion4.90E-04
26GO:0009623: response to parasitic fungus4.90E-04
27GO:1900056: negative regulation of leaf senescence4.99E-04
28GO:0006102: isocitrate metabolic process6.22E-04
29GO:0006623: protein targeting to vacuole8.97E-04
30GO:0010541: acropetal auxin transport1.05E-03
31GO:0019725: cellular homeostasis1.05E-03
32GO:0051252: regulation of RNA metabolic process1.05E-03
33GO:0015012: heparan sulfate proteoglycan biosynthetic process1.05E-03
34GO:0002240: response to molecule of oomycetes origin1.05E-03
35GO:0042814: monopolar cell growth1.05E-03
36GO:0031349: positive regulation of defense response1.05E-03
37GO:1901703: protein localization involved in auxin polar transport1.05E-03
38GO:0046939: nucleotide phosphorylation1.05E-03
39GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.05E-03
40GO:0006024: glycosaminoglycan biosynthetic process1.05E-03
41GO:1902066: regulation of cell wall pectin metabolic process1.05E-03
42GO:0048569: post-embryonic animal organ development1.05E-03
43GO:0052541: plant-type cell wall cellulose metabolic process1.05E-03
44GO:0090332: stomatal closure1.07E-03
45GO:0008202: steroid metabolic process1.07E-03
46GO:0046686: response to cadmium ion1.14E-03
47GO:0071367: cellular response to brassinosteroid stimulus1.72E-03
48GO:0010253: UDP-rhamnose biosynthetic process1.72E-03
49GO:0051176: positive regulation of sulfur metabolic process1.72E-03
50GO:0044375: regulation of peroxisome size1.72E-03
51GO:1901672: positive regulation of systemic acquired resistance1.72E-03
52GO:0090630: activation of GTPase activity1.72E-03
53GO:0010186: positive regulation of cellular defense response1.72E-03
54GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.72E-03
55GO:0010272: response to silver ion1.72E-03
56GO:0048586: regulation of long-day photoperiodism, flowering1.72E-03
57GO:0032922: circadian regulation of gene expression1.72E-03
58GO:0009627: systemic acquired resistance1.79E-03
59GO:0010102: lateral root morphogenesis1.87E-03
60GO:0002237: response to molecule of bacterial origin2.11E-03
61GO:0072334: UDP-galactose transmembrane transport2.50E-03
62GO:0015858: nucleoside transport2.50E-03
63GO:0032877: positive regulation of DNA endoreduplication2.50E-03
64GO:0000187: activation of MAPK activity2.50E-03
65GO:0070301: cellular response to hydrogen peroxide2.50E-03
66GO:0050832: defense response to fungus2.79E-03
67GO:0042742: defense response to bacterium2.83E-03
68GO:0006099: tricarboxylic acid cycle3.13E-03
69GO:0033358: UDP-L-arabinose biosynthetic process3.36E-03
70GO:0033356: UDP-L-arabinose metabolic process3.36E-03
71GO:0006878: cellular copper ion homeostasis3.36E-03
72GO:0000919: cell plate assembly3.36E-03
73GO:0060548: negative regulation of cell death3.36E-03
74GO:0045227: capsule polysaccharide biosynthetic process3.36E-03
75GO:0033320: UDP-D-xylose biosynthetic process3.36E-03
76GO:0048638: regulation of developmental growth3.36E-03
77GO:0016998: cell wall macromolecule catabolic process3.55E-03
78GO:0071369: cellular response to ethylene stimulus4.25E-03
79GO:0010227: floral organ abscission4.25E-03
80GO:0098719: sodium ion import across plasma membrane4.31E-03
81GO:0006564: L-serine biosynthetic process4.31E-03
82GO:0031365: N-terminal protein amino acid modification4.31E-03
83GO:0006097: glyoxylate cycle4.31E-03
84GO:0009435: NAD biosynthetic process4.31E-03
85GO:0006665: sphingolipid metabolic process4.31E-03
86GO:0000304: response to singlet oxygen4.31E-03
87GO:0006886: intracellular protein transport4.63E-03
88GO:0042147: retrograde transport, endosome to Golgi5.01E-03
89GO:0031347: regulation of defense response5.22E-03
90GO:0042732: D-xylose metabolic process5.34E-03
91GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity5.34E-03
92GO:0009117: nucleotide metabolic process5.34E-03
93GO:0042176: regulation of protein catabolic process5.34E-03
94GO:0010315: auxin efflux5.34E-03
95GO:0002238: response to molecule of fungal origin5.34E-03
96GO:0010942: positive regulation of cell death5.34E-03
97GO:0010264: myo-inositol hexakisphosphate biosynthetic process5.34E-03
98GO:0006139: nucleobase-containing compound metabolic process5.34E-03
99GO:0016042: lipid catabolic process6.02E-03
100GO:0048544: recognition of pollen6.28E-03
101GO:0007165: signal transduction6.43E-03
102GO:0006694: steroid biosynthetic process6.44E-03
103GO:0010183: pollen tube guidance6.74E-03
104GO:0006891: intra-Golgi vesicle-mediated transport7.22E-03
105GO:0080186: developmental vegetative growth7.62E-03
106GO:0000122: negative regulation of transcription from RNA polymerase II promoter7.62E-03
107GO:0009610: response to symbiotic fungus7.62E-03
108GO:0046470: phosphatidylcholine metabolic process7.62E-03
109GO:0007050: cell cycle arrest7.62E-03
110GO:0071446: cellular response to salicylic acid stimulus7.62E-03
111GO:0032502: developmental process7.72E-03
112GO:0006914: autophagy8.77E-03
113GO:0009567: double fertilization forming a zygote and endosperm8.77E-03
114GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline8.87E-03
115GO:2000070: regulation of response to water deprivation8.87E-03
116GO:0006468: protein phosphorylation1.01E-02
117GO:0010204: defense response signaling pathway, resistance gene-independent1.02E-02
118GO:0019430: removal of superoxide radicals1.02E-02
119GO:0001558: regulation of cell growth1.02E-02
120GO:0009615: response to virus1.05E-02
121GO:0009816: defense response to bacterium, incompatible interaction1.11E-02
122GO:0015780: nucleotide-sugar transport1.16E-02
123GO:0007338: single fertilization1.16E-02
124GO:0048268: clathrin coat assembly1.30E-02
125GO:0048354: mucilage biosynthetic process involved in seed coat development1.30E-02
126GO:0016192: vesicle-mediated transport1.30E-02
127GO:0051453: regulation of intracellular pH1.30E-02
128GO:0051555: flavonol biosynthetic process1.45E-02
129GO:0006032: chitin catabolic process1.45E-02
130GO:0043069: negative regulation of programmed cell death1.45E-02
131GO:0045454: cell redox homeostasis1.58E-02
132GO:0009631: cold acclimation1.59E-02
133GO:0010043: response to zinc ion1.59E-02
134GO:0048527: lateral root development1.59E-02
135GO:0072593: reactive oxygen species metabolic process1.61E-02
136GO:0000272: polysaccharide catabolic process1.61E-02
137GO:0048229: gametophyte development1.61E-02
138GO:0006508: proteolysis1.68E-02
139GO:0016925: protein sumoylation1.78E-02
140GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.78E-02
141GO:0008361: regulation of cell size1.78E-02
142GO:0006790: sulfur compound metabolic process1.78E-02
143GO:0010150: leaf senescence1.89E-02
144GO:2000028: regulation of photoperiodism, flowering1.94E-02
145GO:0055046: microgametogenesis1.94E-02
146GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.94E-02
147GO:0006839: mitochondrial transport1.99E-02
148GO:0006887: exocytosis2.08E-02
149GO:0006897: endocytosis2.08E-02
150GO:0006541: glutamine metabolic process2.12E-02
151GO:0007166: cell surface receptor signaling pathway2.24E-02
152GO:0051707: response to other organism2.25E-02
153GO:0016310: phosphorylation2.27E-02
154GO:0010039: response to iron ion2.30E-02
155GO:0070588: calcium ion transmembrane transport2.30E-02
156GO:0046854: phosphatidylinositol phosphorylation2.30E-02
157GO:0007033: vacuole organization2.30E-02
158GO:0007031: peroxisome organization2.30E-02
159GO:0000209: protein polyubiquitination2.34E-02
160GO:0042753: positive regulation of circadian rhythm2.48E-02
161GO:0034976: response to endoplasmic reticulum stress2.48E-02
162GO:0055114: oxidation-reduction process2.64E-02
163GO:0000027: ribosomal large subunit assembly2.67E-02
164GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.73E-02
165GO:0009846: pollen germination2.83E-02
166GO:0007017: microtubule-based process2.87E-02
167GO:0010073: meristem maintenance2.87E-02
168GO:0051302: regulation of cell division2.87E-02
169GO:0006486: protein glycosylation3.04E-02
170GO:0048511: rhythmic process3.07E-02
171GO:2000022: regulation of jasmonic acid mediated signaling pathway3.27E-02
172GO:0080092: regulation of pollen tube growth3.27E-02
173GO:0016226: iron-sulfur cluster assembly3.27E-02
174GO:0071215: cellular response to abscisic acid stimulus3.48E-02
175GO:0006012: galactose metabolic process3.48E-02
176GO:0042127: regulation of cell proliferation3.70E-02
177GO:0048316: seed development3.71E-02
178GO:0009620: response to fungus3.94E-02
179GO:0034220: ion transmembrane transport4.14E-02
180GO:0010051: xylem and phloem pattern formation4.14E-02
181GO:0010087: phloem or xylem histogenesis4.14E-02
182GO:0045489: pectin biosynthetic process4.36E-02
183GO:0048868: pollen tube development4.36E-02
184GO:0006885: regulation of pH4.36E-02
185GO:0018105: peptidyl-serine phosphorylation4.44E-02
186GO:0006814: sodium ion transport4.59E-02
187GO:0009738: abscisic acid-activated signaling pathway4.75E-02
188GO:0055072: iron ion homeostasis4.83E-02
189GO:0009555: pollen development4.98E-02
RankGO TermAdjusted P value
1GO:0008734: L-aspartate oxidase activity0.00E+00
2GO:0051670: inulinase activity0.00E+00
3GO:0052873: FMN reductase (NADPH) activity0.00E+00
4GO:0044610: FMN transmembrane transporter activity0.00E+00
5GO:0005212: structural constituent of eye lens0.00E+00
6GO:0008752: FMN reductase activity0.00E+00
7GO:0034338: short-chain carboxylesterase activity0.00E+00
8GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
9GO:0018580: nitronate monooxygenase activity0.00E+00
10GO:0019205: nucleobase-containing compound kinase activity0.00E+00
11GO:0051766: inositol trisphosphate kinase activity0.00E+00
12GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
13GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
14GO:1990585: hydroxyproline O-arabinosyltransferase activity1.05E-05
15GO:0051724: NAD transporter activity1.05E-05
16GO:0019779: Atg8 activating enzyme activity1.05E-05
17GO:0004449: isocitrate dehydrogenase (NAD+) activity7.70E-05
18GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity4.90E-04
19GO:0048037: cofactor binding4.90E-04
20GO:0004348: glucosylceramidase activity4.90E-04
21GO:0051669: fructan beta-fructosidase activity4.90E-04
22GO:0015230: FAD transmembrane transporter activity4.90E-04
23GO:0031219: levanase activity4.90E-04
24GO:2001147: camalexin binding4.90E-04
25GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity4.90E-04
26GO:0004649: poly(ADP-ribose) glycohydrolase activity4.90E-04
27GO:0019786: Atg8-specific protease activity4.90E-04
28GO:2001227: quercitrin binding4.90E-04
29GO:0003987: acetate-CoA ligase activity4.90E-04
30GO:0000824: inositol tetrakisphosphate 3-kinase activity4.90E-04
31GO:0047326: inositol tetrakisphosphate 5-kinase activity4.90E-04
32GO:0047760: butyrate-CoA ligase activity4.90E-04
33GO:0008970: phosphatidylcholine 1-acylhydrolase activity7.58E-04
34GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity7.58E-04
35GO:0008142: oxysterol binding7.58E-04
36GO:0004630: phospholipase D activity7.58E-04
37GO:0004338: glucan exo-1,3-beta-glucosidase activity1.05E-03
38GO:0032934: sterol binding1.05E-03
39GO:0008805: carbon-monoxide oxygenase activity1.05E-03
40GO:0051980: iron-nicotianamine transmembrane transporter activity1.05E-03
41GO:0004385: guanylate kinase activity1.05E-03
42GO:0004775: succinate-CoA ligase (ADP-forming) activity1.05E-03
43GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity1.05E-03
44GO:0050377: UDP-glucose 4,6-dehydratase activity1.05E-03
45GO:0004776: succinate-CoA ligase (GDP-forming) activity1.05E-03
46GO:0015228: coenzyme A transmembrane transporter activity1.05E-03
47GO:0052739: phosphatidylserine 1-acylhydrolase activity1.05E-03
48GO:0008460: dTDP-glucose 4,6-dehydratase activity1.05E-03
49GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity1.05E-03
50GO:0004617: phosphoglycerate dehydrogenase activity1.05E-03
51GO:0010280: UDP-L-rhamnose synthase activity1.05E-03
52GO:0008428: ribonuclease inhibitor activity1.05E-03
53GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.72E-03
54GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.72E-03
55GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity1.72E-03
56GO:0000030: mannosyltransferase activity1.72E-03
57GO:0042409: caffeoyl-CoA O-methyltransferase activity1.72E-03
58GO:0004190: aspartic-type endopeptidase activity2.36E-03
59GO:0004867: serine-type endopeptidase inhibitor activity2.36E-03
60GO:0019201: nucleotide kinase activity2.50E-03
61GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity2.50E-03
62GO:0035529: NADH pyrophosphatase activity2.50E-03
63GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity3.36E-03
64GO:0019776: Atg8 ligase activity3.36E-03
65GO:0004301: epoxide hydrolase activity3.36E-03
66GO:0050373: UDP-arabinose 4-epimerase activity3.36E-03
67GO:0035251: UDP-glucosyltransferase activity3.55E-03
68GO:0005459: UDP-galactose transmembrane transporter activity4.31E-03
69GO:0004623: phospholipase A2 activity4.31E-03
70GO:0008948: oxaloacetate decarboxylase activity4.31E-03
71GO:0005546: phosphatidylinositol-4,5-bisphosphate binding4.31E-03
72GO:0031386: protein tag4.31E-03
73GO:0047631: ADP-ribose diphosphatase activity4.31E-03
74GO:0080122: AMP transmembrane transporter activity4.31E-03
75GO:0008374: O-acyltransferase activity4.31E-03
76GO:0016301: kinase activity4.92E-03
77GO:0051287: NAD binding5.22E-03
78GO:0000210: NAD+ diphosphatase activity5.34E-03
79GO:0016208: AMP binding5.34E-03
80GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity5.34E-03
81GO:0048040: UDP-glucuronate decarboxylase activity5.34E-03
82GO:0031593: polyubiquitin binding5.34E-03
83GO:0047714: galactolipase activity5.34E-03
84GO:0004791: thioredoxin-disulfide reductase activity6.28E-03
85GO:0016853: isomerase activity6.28E-03
86GO:0003924: GTPase activity6.33E-03
87GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity6.44E-03
88GO:0005347: ATP transmembrane transporter activity6.44E-03
89GO:0004656: procollagen-proline 4-dioxygenase activity6.44E-03
90GO:0003950: NAD+ ADP-ribosyltransferase activity6.44E-03
91GO:0003978: UDP-glucose 4-epimerase activity6.44E-03
92GO:0051020: GTPase binding6.44E-03
93GO:0015217: ADP transmembrane transporter activity6.44E-03
94GO:0051920: peroxiredoxin activity6.44E-03
95GO:0070403: NAD+ binding6.44E-03
96GO:0004017: adenylate kinase activity6.44E-03
97GO:0008320: protein transmembrane transporter activity7.62E-03
98GO:0043295: glutathione binding7.62E-03
99GO:0005338: nucleotide-sugar transmembrane transporter activity7.62E-03
100GO:0008235: metalloexopeptidase activity7.62E-03
101GO:0015385: sodium:proton antiporter activity8.24E-03
102GO:0022857: transmembrane transporter activity8.71E-03
103GO:0004525: ribonuclease III activity8.87E-03
104GO:0004708: MAP kinase kinase activity8.87E-03
105GO:0005544: calcium-dependent phospholipid binding8.87E-03
106GO:0004714: transmembrane receptor protein tyrosine kinase activity8.87E-03
107GO:0016209: antioxidant activity8.87E-03
108GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.32E-03
109GO:0051213: dioxygenase activity1.05E-02
110GO:0071949: FAD binding1.16E-02
111GO:0004806: triglyceride lipase activity1.24E-02
112GO:0030247: polysaccharide binding1.24E-02
113GO:0031490: chromatin DNA binding1.30E-02
114GO:0005096: GTPase activator activity1.44E-02
115GO:0004713: protein tyrosine kinase activity1.45E-02
116GO:0030234: enzyme regulator activity1.45E-02
117GO:0004568: chitinase activity1.45E-02
118GO:0008171: O-methyltransferase activity1.45E-02
119GO:0005545: 1-phosphatidylinositol binding1.45E-02
120GO:0008047: enzyme activator activity1.45E-02
121GO:0005525: GTP binding1.46E-02
122GO:0030145: manganese ion binding1.59E-02
123GO:0015386: potassium:proton antiporter activity1.61E-02
124GO:0004177: aminopeptidase activity1.61E-02
125GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.74E-02
126GO:0015198: oligopeptide transporter activity1.78E-02
127GO:0015297: antiporter activity1.78E-02
128GO:0005388: calcium-transporting ATPase activity1.94E-02
129GO:0004565: beta-galactosidase activity1.94E-02
130GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.94E-02
131GO:0004175: endopeptidase activity2.12E-02
132GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.12E-02
133GO:0031624: ubiquitin conjugating enzyme binding2.12E-02
134GO:0008061: chitin binding2.30E-02
135GO:0003712: transcription cofactor activity2.30E-02
136GO:0001046: core promoter sequence-specific DNA binding2.67E-02
137GO:0031418: L-ascorbic acid binding2.67E-02
138GO:0043130: ubiquitin binding2.67E-02
139GO:0046872: metal ion binding3.03E-02
140GO:0004298: threonine-type endopeptidase activity3.07E-02
141GO:0008408: 3'-5' exonuclease activity3.07E-02
142GO:0004601: peroxidase activity3.27E-02
143GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.27E-02
144GO:0005516: calmodulin binding3.41E-02
145GO:0008810: cellulase activity3.48E-02
146GO:0016491: oxidoreductase activity3.61E-02
147GO:0003756: protein disulfide isomerase activity3.70E-02
148GO:0004499: N,N-dimethylaniline monooxygenase activity3.70E-02
149GO:0016787: hydrolase activity3.89E-02
150GO:0047134: protein-disulfide reductase activity3.91E-02
151GO:0005102: receptor binding3.91E-02
152GO:0005451: monovalent cation:proton antiporter activity4.14E-02
153GO:0004497: monooxygenase activity4.26E-02
154GO:0001085: RNA polymerase II transcription factor binding4.36E-02
155GO:0004527: exonuclease activity4.36E-02
156GO:0005199: structural constituent of cell wall4.36E-02
157GO:0030276: clathrin binding4.36E-02
158GO:0015299: solute:proton antiporter activity4.59E-02
159GO:0010181: FMN binding4.59E-02
160GO:0016757: transferase activity, transferring glycosyl groups4.61E-02
161GO:0005509: calcium ion binding4.85E-02
162GO:0005524: ATP binding4.95E-02
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Gene type



Gene DE type