co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G02800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048263: determination of dorsal identity	0.00E+00
2	GO:0090322: regulation of superoxide metabolic process	0.00E+00
3	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
4	GO:0080127: fruit septum development	0.00E+00
5	GO:0046486: glycerolipid metabolic process	0.00E+00
6	GO:0019988: charged-tRNA amino acid modification	0.00E+00
7	GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	0.00E+00
8	GO:0045014: negative regulation of transcription by glucose	0.00E+00
9	GO:0006364: rRNA processing	1.98E-05
10	GO:0006401: RNA catabolic process	1.74E-04
11	GO:0046620: regulation of organ growth	2.22E-04
12	GO:0006353: DNA-templated transcription, termination	2.22E-04
13	GO:1905039: carboxylic acid transmembrane transport	2.43E-04
14	GO:1905200: gibberellic acid transmembrane transport	2.43E-04
15	GO:0000025: maltose catabolic process	2.43E-04
16	GO:0080112: seed growth	2.43E-04
17	GO:0009733: response to auxin	2.93E-04
18	GO:0009658: chloroplast organization	3.46E-04
19	GO:0016441: posttranscriptional gene silencing	4.61E-04
20	GO:0006949: syncytium formation	4.61E-04
21	GO:0048731: system development	5.39E-04
22	GO:0006650: glycerophospholipid metabolic process	5.39E-04
23	GO:2000071: regulation of defense response by callose deposition	5.39E-04
24	GO:1901529: positive regulation of anion channel activity	5.39E-04
25	GO:0019374: galactolipid metabolic process	5.39E-04
26	GO:0010569: regulation of double-strand break repair via homologous recombination	5.39E-04
27	GO:0009887: animal organ morphogenesis	7.77E-04
28	GO:0006518: peptide metabolic process	8.75E-04
29	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	8.75E-04
30	GO:0046168: glycerol-3-phosphate catabolic process	8.75E-04
31	GO:0009855: determination of bilateral symmetry	1.25E-03
32	GO:0016556: mRNA modification	1.25E-03
33	GO:0045017: glycerolipid biosynthetic process	1.25E-03
34	GO:0010371: regulation of gibberellin biosynthetic process	1.25E-03
35	GO:0007276: gamete generation	1.25E-03
36	GO:0006072: glycerol-3-phosphate metabolic process	1.25E-03
37	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.40E-03
38	GO:0009664: plant-type cell wall organization	1.47E-03
39	GO:0042127: regulation of cell proliferation	1.66E-03
40	GO:1900864: mitochondrial RNA modification	1.67E-03
41	GO:0006221: pyrimidine nucleotide biosynthetic process	1.67E-03
42	GO:0009734: auxin-activated signaling pathway	1.85E-03
43	GO:0008033: tRNA processing	1.94E-03
44	GO:0010087: phloem or xylem histogenesis	1.94E-03
45	GO:0010305: leaf vascular tissue pattern formation	2.09E-03
46	GO:0016120: carotene biosynthetic process	2.13E-03
47	GO:0016558: protein import into peroxisome matrix	2.13E-03
48	GO:0048497: maintenance of floral organ identity	2.13E-03
49	GO:0016123: xanthophyll biosynthetic process	2.13E-03
50	GO:0009247: glycolipid biosynthetic process	2.13E-03
51	GO:0060918: auxin transport	2.62E-03
52	GO:0042793: transcription from plastid promoter	2.62E-03
53	GO:0003006: developmental process involved in reproduction	2.62E-03
54	GO:0009643: photosynthetic acclimation	2.62E-03
55	GO:0009828: plant-type cell wall loosening	3.11E-03
56	GO:0010014: meristem initiation	3.15E-03
57	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	3.15E-03
58	GO:0009942: longitudinal axis specification	3.15E-03
59	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.15E-03
60	GO:0010310: regulation of hydrogen peroxide metabolic process	3.15E-03
61	GO:0080060: integument development	3.15E-03
62	GO:0010098: suspensor development	3.72E-03
63	GO:1900056: negative regulation of leaf senescence	3.72E-03
64	GO:0009642: response to light intensity	4.31E-03
65	GO:0042255: ribosome assembly	4.31E-03
66	GO:0006402: mRNA catabolic process	4.31E-03
67	GO:0019375: galactolipid biosynthetic process	4.31E-03
68	GO:0032508: DNA duplex unwinding	4.31E-03
69	GO:0010492: maintenance of shoot apical meristem identity	4.31E-03
70	GO:0052543: callose deposition in cell wall	4.31E-03
71	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.31E-03
72	GO:0016311: dephosphorylation	4.60E-03
73	GO:0040008: regulation of growth	4.74E-03
74	GO:0006397: mRNA processing	4.77E-03
75	GO:0010497: plasmodesmata-mediated intercellular transport	4.93E-03
76	GO:0019430: removal of superoxide radicals	4.93E-03
77	GO:0032544: plastid translation	4.93E-03
78	GO:0009793: embryo development ending in seed dormancy	5.09E-03
79	GO:0048507: meristem development	5.59E-03
80	GO:0000373: Group II intron splicing	5.59E-03
81	GO:0048589: developmental growth	5.59E-03
82	GO:0031425: chloroplast RNA processing	6.27E-03
83	GO:1900865: chloroplast RNA modification	6.27E-03
84	GO:0006535: cysteine biosynthetic process from serine	6.99E-03
85	GO:0048829: root cap development	6.99E-03
86	GO:0009641: shade avoidance	6.99E-03
87	GO:0009682: induced systemic resistance	7.73E-03
88	GO:0015770: sucrose transport	7.73E-03
89	GO:1903507: negative regulation of nucleic acid-templated transcription	7.73E-03
90	GO:0009750: response to fructose	7.73E-03
91	GO:0046856: phosphatidylinositol dephosphorylation	7.73E-03
92	GO:0045037: protein import into chloroplast stroma	8.49E-03
93	GO:0010582: floral meristem determinacy	8.49E-03
94	GO:0010152: pollen maturation	8.49E-03
95	GO:0012501: programmed cell death	8.49E-03
96	GO:0005983: starch catabolic process	8.49E-03
97	GO:0010102: lateral root morphogenesis	9.29E-03
98	GO:0006006: glucose metabolic process	9.29E-03
99	GO:0010075: regulation of meristem growth	9.29E-03
100	GO:0010588: cotyledon vascular tissue pattern formation	9.29E-03
101	GO:0031347: regulation of defense response	9.58E-03
102	GO:0010020: chloroplast fission	1.01E-02
103	GO:0048467: gynoecium development	1.01E-02
104	GO:0009901: anther dehiscence	1.10E-02
105	GO:0080188: RNA-directed DNA methylation	1.10E-02
106	GO:0006636: unsaturated fatty acid biosynthetic process	1.18E-02
107	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.20E-02
108	GO:0080147: root hair cell development	1.27E-02
109	GO:2000377: regulation of reactive oxygen species metabolic process	1.27E-02
110	GO:0019344: cysteine biosynthetic process	1.27E-02
111	GO:0048367: shoot system development	1.30E-02
112	GO:0010073: meristem maintenance	1.37E-02
113	GO:0019953: sexual reproduction	1.37E-02
114	GO:0009740: gibberellic acid mediated signaling pathway	1.43E-02
115	GO:0003333: amino acid transmembrane transport	1.46E-02
116	GO:0010431: seed maturation	1.46E-02
117	GO:0006396: RNA processing	1.57E-02
118	GO:0009686: gibberellin biosynthetic process	1.66E-02
119	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.66E-02
120	GO:0010091: trichome branching	1.76E-02
121	GO:0048443: stamen development	1.76E-02
122	GO:0032259: methylation	1.79E-02
123	GO:0080022: primary root development	1.97E-02
124	GO:0010501: RNA secondary structure unwinding	1.97E-02
125	GO:0010118: stomatal movement	1.97E-02
126	GO:0071472: cellular response to salt stress	2.07E-02
127	GO:0009749: response to glucose	2.29E-02
128	GO:0008654: phospholipid biosynthetic process	2.29E-02
129	GO:0002229: defense response to oomycetes	2.41E-02
130	GO:0006635: fatty acid beta-oxidation	2.41E-02
131	GO:0080156: mitochondrial mRNA modification	2.41E-02
132	GO:0016036: cellular response to phosphate starvation	2.46E-02
133	GO:0010583: response to cyclopentenone	2.52E-02
134	GO:0031047: gene silencing by RNA	2.52E-02
135	GO:0032502: developmental process	2.52E-02
136	GO:0045490: pectin catabolic process	2.64E-02
137	GO:0030163: protein catabolic process	2.64E-02
138	GO:0006464: cellular protein modification process	2.76E-02
139	GO:0019760: glucosinolate metabolic process	2.76E-02
140	GO:0007165: signal transduction	3.33E-02
141	GO:0009627: systemic acquired resistance	3.39E-02
142	GO:0015995: chlorophyll biosynthetic process	3.52E-02
143	GO:0009826: unidimensional cell growth	3.92E-02
144	GO:0006811: ion transport	4.05E-02
145	GO:0010218: response to far red light	4.05E-02
146	GO:0000724: double-strand break repair via homologous recombination	4.33E-02
147	GO:0006865: amino acid transport	4.33E-02
148	GO:0009867: jasmonic acid mediated signaling pathway	4.48E-02
149	GO:0007049: cell cycle	4.54E-02
150	GO:0030001: metal ion transport	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0004835: tubulin-tyrosine ligase activity	0.00E+00
2	GO:0009899: ent-kaurene synthase activity	0.00E+00
3	GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity	0.00E+00
4	GO:0016763: transferase activity, transferring pentosyl groups	0.00E+00
5	GO:0008859: exoribonuclease II activity	0.00E+00
6	GO:0004134: 4-alpha-glucanotransferase activity	2.43E-04
7	GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor	2.43E-04
8	GO:0004654: polyribonucleotide nucleotidyltransferase activity	2.43E-04
9	GO:1905201: gibberellin transmembrane transporter activity	2.43E-04
10	GO:0008173: RNA methyltransferase activity	2.74E-04
11	GO:0042389: omega-3 fatty acid desaturase activity	5.39E-04
12	GO:0004809: tRNA (guanine-N2-)-methyltransferase activity	5.39E-04
13	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	5.39E-04
14	GO:0000175: 3'-5'-exoribonuclease activity	6.91E-04
15	GO:0003723: RNA binding	8.53E-04
16	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	8.75E-04
17	GO:0009041: uridylate kinase activity	1.25E-03
18	GO:0030570: pectate lyase activity	1.53E-03
19	GO:0010011: auxin binding	1.67E-03
20	GO:0010328: auxin influx transmembrane transporter activity	1.67E-03
21	GO:0004784: superoxide dismutase activity	2.62E-03
22	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	2.62E-03
23	GO:0009378: four-way junction helicase activity	2.62E-03
24	GO:0003968: RNA-directed 5'-3' RNA polymerase activity	2.62E-03
25	GO:0043140: ATP-dependent 3'-5' DNA helicase activity	2.62E-03
26	GO:0008026: ATP-dependent helicase activity	2.70E-03
27	GO:0043138: 3'-5' DNA helicase activity	3.15E-03
28	GO:0004124: cysteine synthase activity	3.15E-03
29	GO:0019843: rRNA binding	3.34E-03
30	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.31E-03
31	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.93E-03
32	GO:0003724: RNA helicase activity	4.93E-03
33	GO:0003993: acid phosphatase activity	6.41E-03
34	GO:0008289: lipid binding	7.39E-03
35	GO:0008515: sucrose transmembrane transporter activity	7.73E-03
36	GO:0008168: methyltransferase activity	8.35E-03
37	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	8.49E-03
38	GO:0003725: double-stranded RNA binding	9.29E-03
39	GO:0008266: poly(U) RNA binding	1.01E-02
40	GO:0051119: sugar transmembrane transporter activity	1.10E-02
41	GO:0003712: transcription cofactor activity	1.10E-02
42	GO:0004190: aspartic-type endopeptidase activity	1.10E-02
43	GO:0003714: transcription corepressor activity	1.27E-02
44	GO:0004540: ribonuclease activity	1.46E-02
45	GO:0003779: actin binding	1.48E-02
46	GO:0004722: protein serine/threonine phosphatase activity	1.63E-02
47	GO:0003727: single-stranded RNA binding	1.76E-02
48	GO:0005102: receptor binding	1.86E-02
49	GO:0004519: endonuclease activity	2.10E-02
50	GO:0019901: protein kinase binding	2.29E-02
51	GO:0048038: quinone binding	2.41E-02
52	GO:0016791: phosphatase activity	2.76E-02
53	GO:0016887: ATPase activity	3.27E-02
54	GO:0004004: ATP-dependent RNA helicase activity	3.52E-02
55	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.65E-02
56	GO:0005096: GTPase activator activity	3.92E-02
57	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.05E-02
58	GO:0004222: metalloendopeptidase activity	4.05E-02