GO Enrichment Analysis of Co-expressed Genes with
AT1G02350
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
| 2 | GO:0035884: arabinan biosynthetic process | 0.00E+00 |
| 3 | GO:0009606: tropism | 0.00E+00 |
| 4 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 5 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 6 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
| 7 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 8 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 9 | GO:0090615: mitochondrial mRNA processing | 0.00E+00 |
| 10 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 11 | GO:0046719: regulation by virus of viral protein levels in host cell | 0.00E+00 |
| 12 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 13 | GO:0042793: transcription from plastid promoter | 5.70E-11 |
| 14 | GO:0009658: chloroplast organization | 2.11E-06 |
| 15 | GO:0009451: RNA modification | 5.79E-05 |
| 16 | GO:0016998: cell wall macromolecule catabolic process | 1.86E-04 |
| 17 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.77E-04 |
| 18 | GO:0048437: floral organ development | 2.86E-04 |
| 19 | GO:0006955: immune response | 2.86E-04 |
| 20 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 3.37E-04 |
| 21 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 3.37E-04 |
| 22 | GO:0080112: seed growth | 3.37E-04 |
| 23 | GO:0090558: plant epidermis development | 3.37E-04 |
| 24 | GO:1905039: carboxylic acid transmembrane transport | 3.37E-04 |
| 25 | GO:1905200: gibberellic acid transmembrane transport | 3.37E-04 |
| 26 | GO:1903866: palisade mesophyll development | 3.37E-04 |
| 27 | GO:0010063: positive regulation of trichoblast fate specification | 3.37E-04 |
| 28 | GO:0010480: microsporocyte differentiation | 3.37E-04 |
| 29 | GO:0090063: positive regulation of microtubule nucleation | 3.37E-04 |
| 30 | GO:0035987: endodermal cell differentiation | 3.37E-04 |
| 31 | GO:0043609: regulation of carbon utilization | 3.37E-04 |
| 32 | GO:0006436: tryptophanyl-tRNA aminoacylation | 3.37E-04 |
| 33 | GO:0034757: negative regulation of iron ion transport | 3.37E-04 |
| 34 | GO:0042659: regulation of cell fate specification | 3.37E-04 |
| 35 | GO:0006535: cysteine biosynthetic process from serine | 7.29E-04 |
| 36 | GO:1901529: positive regulation of anion channel activity | 7.34E-04 |
| 37 | GO:0033566: gamma-tubulin complex localization | 7.34E-04 |
| 38 | GO:0048255: mRNA stabilization | 7.34E-04 |
| 39 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 7.34E-04 |
| 40 | GO:0010569: regulation of double-strand break repair via homologous recombination | 7.34E-04 |
| 41 | GO:0010271: regulation of chlorophyll catabolic process | 7.34E-04 |
| 42 | GO:0018026: peptidyl-lysine monomethylation | 7.34E-04 |
| 43 | GO:0009662: etioplast organization | 7.34E-04 |
| 44 | GO:1904143: positive regulation of carotenoid biosynthetic process | 7.34E-04 |
| 45 | GO:0080009: mRNA methylation | 7.34E-04 |
| 46 | GO:0009875: pollen-pistil interaction | 7.34E-04 |
| 47 | GO:0010270: photosystem II oxygen evolving complex assembly | 7.34E-04 |
| 48 | GO:0048229: gametophyte development | 8.40E-04 |
| 49 | GO:0010411: xyloglucan metabolic process | 9.50E-04 |
| 50 | GO:0006000: fructose metabolic process | 1.19E-03 |
| 51 | GO:0080117: secondary growth | 1.19E-03 |
| 52 | GO:0090391: granum assembly | 1.19E-03 |
| 53 | GO:0006518: peptide metabolic process | 1.19E-03 |
| 54 | GO:0042780: tRNA 3'-end processing | 1.19E-03 |
| 55 | GO:0001578: microtubule bundle formation | 1.19E-03 |
| 56 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 1.19E-03 |
| 57 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 1.19E-03 |
| 58 | GO:0090708: specification of plant organ axis polarity | 1.19E-03 |
| 59 | GO:0019344: cysteine biosynthetic process | 1.68E-03 |
| 60 | GO:0009800: cinnamic acid biosynthetic process | 1.71E-03 |
| 61 | GO:0010306: rhamnogalacturonan II biosynthetic process | 1.71E-03 |
| 62 | GO:0046739: transport of virus in multicellular host | 1.71E-03 |
| 63 | GO:0010371: regulation of gibberellin biosynthetic process | 1.71E-03 |
| 64 | GO:1902476: chloride transmembrane transport | 1.71E-03 |
| 65 | GO:0010071: root meristem specification | 1.71E-03 |
| 66 | GO:0010239: chloroplast mRNA processing | 1.71E-03 |
| 67 | GO:0042546: cell wall biogenesis | 2.11E-03 |
| 68 | GO:0006221: pyrimidine nucleotide biosynthetic process | 2.30E-03 |
| 69 | GO:0030104: water homeostasis | 2.30E-03 |
| 70 | GO:0006021: inositol biosynthetic process | 2.30E-03 |
| 71 | GO:0006346: methylation-dependent chromatin silencing | 2.30E-03 |
| 72 | GO:0006479: protein methylation | 2.30E-03 |
| 73 | GO:0051322: anaphase | 2.30E-03 |
| 74 | GO:0042127: regulation of cell proliferation | 2.65E-03 |
| 75 | GO:0006364: rRNA processing | 2.93E-03 |
| 76 | GO:0048497: maintenance of floral organ identity | 2.93E-03 |
| 77 | GO:0009741: response to brassinosteroid | 3.34E-03 |
| 78 | GO:0016554: cytidine to uridine editing | 3.63E-03 |
| 79 | GO:0009913: epidermal cell differentiation | 3.63E-03 |
| 80 | GO:0010315: auxin efflux | 3.63E-03 |
| 81 | GO:1902456: regulation of stomatal opening | 3.63E-03 |
| 82 | GO:0006559: L-phenylalanine catabolic process | 3.63E-03 |
| 83 | GO:0048831: regulation of shoot system development | 3.63E-03 |
| 84 | GO:0009643: photosynthetic acclimation | 3.63E-03 |
| 85 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 3.63E-03 |
| 86 | GO:0080156: mitochondrial mRNA modification | 4.12E-03 |
| 87 | GO:0009734: auxin-activated signaling pathway | 4.30E-03 |
| 88 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.37E-03 |
| 89 | GO:1901259: chloroplast rRNA processing | 4.37E-03 |
| 90 | GO:0048509: regulation of meristem development | 4.37E-03 |
| 91 | GO:0010310: regulation of hydrogen peroxide metabolic process | 4.37E-03 |
| 92 | GO:2000067: regulation of root morphogenesis | 4.37E-03 |
| 93 | GO:0009955: adaxial/abaxial pattern specification | 4.37E-03 |
| 94 | GO:0010583: response to cyclopentenone | 4.40E-03 |
| 95 | GO:0032502: developmental process | 4.40E-03 |
| 96 | GO:0009828: plant-type cell wall loosening | 4.99E-03 |
| 97 | GO:0006821: chloride transport | 5.15E-03 |
| 98 | GO:0000082: G1/S transition of mitotic cell cycle | 5.15E-03 |
| 99 | GO:0010444: guard mother cell differentiation | 5.15E-03 |
| 100 | GO:0007050: cell cycle arrest | 5.15E-03 |
| 101 | GO:0010027: thylakoid membrane organization | 5.96E-03 |
| 102 | GO:0009642: response to light intensity | 5.99E-03 |
| 103 | GO:0001522: pseudouridine synthesis | 5.99E-03 |
| 104 | GO:0042255: ribosome assembly | 5.99E-03 |
| 105 | GO:0006353: DNA-templated transcription, termination | 5.99E-03 |
| 106 | GO:0048766: root hair initiation | 5.99E-03 |
| 107 | GO:0055075: potassium ion homeostasis | 5.99E-03 |
| 108 | GO:0000105: histidine biosynthetic process | 5.99E-03 |
| 109 | GO:0052543: callose deposition in cell wall | 5.99E-03 |
| 110 | GO:0009416: response to light stimulus | 6.44E-03 |
| 111 | GO:0019430: removal of superoxide radicals | 6.87E-03 |
| 112 | GO:0010497: plasmodesmata-mediated intercellular transport | 6.87E-03 |
| 113 | GO:0032544: plastid translation | 6.87E-03 |
| 114 | GO:0007389: pattern specification process | 6.87E-03 |
| 115 | GO:0006002: fructose 6-phosphate metabolic process | 6.87E-03 |
| 116 | GO:0048481: plant ovule development | 7.79E-03 |
| 117 | GO:0000373: Group II intron splicing | 7.79E-03 |
| 118 | GO:0048589: developmental growth | 7.79E-03 |
| 119 | GO:0000902: cell morphogenesis | 7.79E-03 |
| 120 | GO:0098656: anion transmembrane transport | 7.79E-03 |
| 121 | GO:0000160: phosphorelay signal transduction system | 8.19E-03 |
| 122 | GO:0042761: very long-chain fatty acid biosynthetic process | 8.75E-03 |
| 123 | GO:1900865: chloroplast RNA modification | 8.75E-03 |
| 124 | GO:2000280: regulation of root development | 8.75E-03 |
| 125 | GO:0006349: regulation of gene expression by genetic imprinting | 8.75E-03 |
| 126 | GO:0016573: histone acetylation | 8.75E-03 |
| 127 | GO:0009733: response to auxin | 9.13E-03 |
| 128 | GO:0006949: syncytium formation | 9.76E-03 |
| 129 | GO:0010048: vernalization response | 9.76E-03 |
| 130 | GO:0009739: response to gibberellin | 1.07E-02 |
| 131 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.08E-02 |
| 132 | GO:0015770: sucrose transport | 1.08E-02 |
| 133 | GO:0009750: response to fructose | 1.08E-02 |
| 134 | GO:0008380: RNA splicing | 1.16E-02 |
| 135 | GO:0010152: pollen maturation | 1.19E-02 |
| 136 | GO:0045037: protein import into chloroplast stroma | 1.19E-02 |
| 137 | GO:0006790: sulfur compound metabolic process | 1.19E-02 |
| 138 | GO:0009744: response to sucrose | 1.28E-02 |
| 139 | GO:0010102: lateral root morphogenesis | 1.30E-02 |
| 140 | GO:0009691: cytokinin biosynthetic process | 1.30E-02 |
| 141 | GO:0010075: regulation of meristem growth | 1.30E-02 |
| 142 | GO:0010020: chloroplast fission | 1.42E-02 |
| 143 | GO:0009934: regulation of meristem structural organization | 1.42E-02 |
| 144 | GO:0009793: embryo development ending in seed dormancy | 1.43E-02 |
| 145 | GO:0080188: RNA-directed DNA methylation | 1.54E-02 |
| 146 | GO:0009901: anther dehiscence | 1.54E-02 |
| 147 | GO:0046854: phosphatidylinositol phosphorylation | 1.54E-02 |
| 148 | GO:0009664: plant-type cell wall organization | 1.61E-02 |
| 149 | GO:0006833: water transport | 1.66E-02 |
| 150 | GO:0009736: cytokinin-activated signaling pathway | 1.73E-02 |
| 151 | GO:0000027: ribosomal large subunit assembly | 1.79E-02 |
| 152 | GO:0006418: tRNA aminoacylation for protein translation | 1.92E-02 |
| 153 | GO:0010073: meristem maintenance | 1.92E-02 |
| 154 | GO:0051302: regulation of cell division | 1.92E-02 |
| 155 | GO:0048366: leaf development | 1.98E-02 |
| 156 | GO:0006306: DNA methylation | 2.05E-02 |
| 157 | GO:0010431: seed maturation | 2.05E-02 |
| 158 | GO:0048316: seed development | 2.11E-02 |
| 159 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.33E-02 |
| 160 | GO:0071215: cellular response to abscisic acid stimulus | 2.33E-02 |
| 161 | GO:0010082: regulation of root meristem growth | 2.33E-02 |
| 162 | GO:0048443: stamen development | 2.47E-02 |
| 163 | GO:0006396: RNA processing | 2.53E-02 |
| 164 | GO:0070417: cellular response to cold | 2.62E-02 |
| 165 | GO:0000226: microtubule cytoskeleton organization | 2.77E-02 |
| 166 | GO:0008033: tRNA processing | 2.77E-02 |
| 167 | GO:0010501: RNA secondary structure unwinding | 2.77E-02 |
| 168 | GO:0010087: phloem or xylem histogenesis | 2.77E-02 |
| 169 | GO:0010118: stomatal movement | 2.77E-02 |
| 170 | GO:0048653: anther development | 2.77E-02 |
| 171 | GO:0009960: endosperm development | 2.92E-02 |
| 172 | GO:0009958: positive gravitropism | 2.92E-02 |
| 173 | GO:0010305: leaf vascular tissue pattern formation | 2.92E-02 |
| 174 | GO:0048868: pollen tube development | 2.92E-02 |
| 175 | GO:0048544: recognition of pollen | 3.07E-02 |
| 176 | GO:0007018: microtubule-based movement | 3.07E-02 |
| 177 | GO:0006814: sodium ion transport | 3.07E-02 |
| 178 | GO:0009646: response to absence of light | 3.07E-02 |
| 179 | GO:0010183: pollen tube guidance | 3.23E-02 |
| 180 | GO:0048825: cotyledon development | 3.23E-02 |
| 181 | GO:0009749: response to glucose | 3.23E-02 |
| 182 | GO:0009851: auxin biosynthetic process | 3.23E-02 |
| 183 | GO:0031047: gene silencing by RNA | 3.55E-02 |
| 184 | GO:0016032: viral process | 3.55E-02 |
| 185 | GO:0009630: gravitropism | 3.55E-02 |
| 186 | GO:0009790: embryo development | 3.59E-02 |
| 187 | GO:0010252: auxin homeostasis | 3.88E-02 |
| 188 | GO:0006468: protein phosphorylation | 3.88E-02 |
| 189 | GO:0040008: regulation of growth | 4.05E-02 |
| 190 | GO:0000910: cytokinesis | 4.23E-02 |
| 191 | GO:0045490: pectin catabolic process | 4.24E-02 |
| 192 | GO:0001666: response to hypoxia | 4.40E-02 |
| 193 | GO:0010029: regulation of seed germination | 4.58E-02 |
| 194 | GO:0006974: cellular response to DNA damage stimulus | 4.76E-02 |
| 195 | GO:0007166: cell surface receptor signaling pathway | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042834: peptidoglycan binding | 0.00E+00 |
| 2 | GO:0071633: dihydroceramidase activity | 0.00E+00 |
| 3 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 4 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 5 | GO:0004401: histidinol-phosphatase activity | 0.00E+00 |
| 6 | GO:0052834: inositol monophosphate phosphatase activity | 0.00E+00 |
| 7 | GO:0003723: RNA binding | 2.06E-06 |
| 8 | GO:0004519: endonuclease activity | 2.46E-05 |
| 9 | GO:0004124: cysteine synthase activity | 2.20E-04 |
| 10 | GO:0003727: single-stranded RNA binding | 2.69E-04 |
| 11 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 3.37E-04 |
| 12 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 3.37E-04 |
| 13 | GO:0016274: protein-arginine N-methyltransferase activity | 3.37E-04 |
| 14 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.37E-04 |
| 15 | GO:0052381: tRNA dimethylallyltransferase activity | 3.37E-04 |
| 16 | GO:0004830: tryptophan-tRNA ligase activity | 3.37E-04 |
| 17 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 3.37E-04 |
| 18 | GO:0004016: adenylate cyclase activity | 3.37E-04 |
| 19 | GO:1905201: gibberellin transmembrane transporter activity | 3.37E-04 |
| 20 | GO:0008836: diaminopimelate decarboxylase activity | 3.37E-04 |
| 21 | GO:0008173: RNA methyltransferase activity | 4.41E-04 |
| 22 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 4.85E-04 |
| 23 | GO:0008934: inositol monophosphate 1-phosphatase activity | 7.34E-04 |
| 24 | GO:0052833: inositol monophosphate 4-phosphatase activity | 7.34E-04 |
| 25 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 7.34E-04 |
| 26 | GO:0009884: cytokinin receptor activity | 7.34E-04 |
| 27 | GO:0052832: inositol monophosphate 3-phosphatase activity | 7.34E-04 |
| 28 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 9.50E-04 |
| 29 | GO:0009982: pseudouridine synthase activity | 1.08E-03 |
| 30 | GO:0019843: rRNA binding | 1.16E-03 |
| 31 | GO:0017150: tRNA dihydrouridine synthase activity | 1.19E-03 |
| 32 | GO:0045548: phenylalanine ammonia-lyase activity | 1.19E-03 |
| 33 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 1.19E-03 |
| 34 | GO:0016805: dipeptidase activity | 1.19E-03 |
| 35 | GO:0005034: osmosensor activity | 1.19E-03 |
| 36 | GO:0005515: protein binding | 1.63E-03 |
| 37 | GO:0009041: uridylate kinase activity | 1.71E-03 |
| 38 | GO:0008508: bile acid:sodium symporter activity | 1.71E-03 |
| 39 | GO:0001872: (1->3)-beta-D-glucan binding | 1.71E-03 |
| 40 | GO:0005253: anion channel activity | 2.30E-03 |
| 41 | GO:0016279: protein-lysine N-methyltransferase activity | 2.30E-03 |
| 42 | GO:0010011: auxin binding | 2.30E-03 |
| 43 | GO:0030570: pectate lyase activity | 2.43E-03 |
| 44 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.93E-03 |
| 45 | GO:0003777: microtubule motor activity | 3.34E-03 |
| 46 | GO:0004784: superoxide dismutase activity | 3.63E-03 |
| 47 | GO:0005247: voltage-gated chloride channel activity | 3.63E-03 |
| 48 | GO:2001070: starch binding | 3.63E-03 |
| 49 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 4.37E-03 |
| 50 | GO:0019900: kinase binding | 4.37E-03 |
| 51 | GO:0004386: helicase activity | 5.13E-03 |
| 52 | GO:0008237: metallopeptidase activity | 5.31E-03 |
| 53 | GO:0004222: metalloendopeptidase activity | 8.59E-03 |
| 54 | GO:0009672: auxin:proton symporter activity | 8.75E-03 |
| 55 | GO:0004673: protein histidine kinase activity | 9.76E-03 |
| 56 | GO:0005524: ATP binding | 1.02E-02 |
| 57 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.04E-02 |
| 58 | GO:0008515: sucrose transmembrane transporter activity | 1.08E-02 |
| 59 | GO:0010329: auxin efflux transmembrane transporter activity | 1.30E-02 |
| 60 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.30E-02 |
| 61 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.30E-02 |
| 62 | GO:0031072: heat shock protein binding | 1.30E-02 |
| 63 | GO:0000155: phosphorelay sensor kinase activity | 1.30E-02 |
| 64 | GO:0008168: methyltransferase activity | 1.54E-02 |
| 65 | GO:0003712: transcription cofactor activity | 1.54E-02 |
| 66 | GO:0051119: sugar transmembrane transporter activity | 1.54E-02 |
| 67 | GO:0043424: protein histidine kinase binding | 1.92E-02 |
| 68 | GO:0004707: MAP kinase activity | 2.05E-02 |
| 69 | GO:0004176: ATP-dependent peptidase activity | 2.05E-02 |
| 70 | GO:0033612: receptor serine/threonine kinase binding | 2.05E-02 |
| 71 | GO:0008408: 3'-5' exonuclease activity | 2.05E-02 |
| 72 | GO:0008514: organic anion transmembrane transporter activity | 2.47E-02 |
| 73 | GO:0008026: ATP-dependent helicase activity | 2.61E-02 |
| 74 | GO:0018024: histone-lysine N-methyltransferase activity | 2.62E-02 |
| 75 | GO:0004812: aminoacyl-tRNA ligase activity | 2.62E-02 |
| 76 | GO:0004402: histone acetyltransferase activity | 2.77E-02 |
| 77 | GO:0001085: RNA polymerase II transcription factor binding | 2.92E-02 |
| 78 | GO:0004527: exonuclease activity | 2.92E-02 |
| 79 | GO:0003713: transcription coactivator activity | 2.92E-02 |
| 80 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 2.92E-02 |
| 81 | GO:0019901: protein kinase binding | 3.23E-02 |
| 82 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.51E-02 |
| 83 | GO:0015144: carbohydrate transmembrane transporter activity | 3.68E-02 |
| 84 | GO:0000156: phosphorelay response regulator activity | 3.72E-02 |
| 85 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.96E-02 |
| 86 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 4.05E-02 |
| 87 | GO:0004672: protein kinase activity | 4.12E-02 |
| 88 | GO:0005351: sugar:proton symporter activity | 4.15E-02 |
| 89 | GO:0003729: mRNA binding | 4.21E-02 |
| 90 | GO:0008017: microtubule binding | 4.44E-02 |
| 91 | GO:0008375: acetylglucosaminyltransferase activity | 4.76E-02 |
| 92 | GO:0004004: ATP-dependent RNA helicase activity | 4.94E-02 |
| 93 | GO:0030247: polysaccharide binding | 4.94E-02 |