Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G01560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071327: cellular response to trehalose stimulus0.00E+00
2GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
3GO:1900367: positive regulation of defense response to insect0.00E+00
4GO:0002376: immune system process0.00E+00
5GO:0010324: membrane invagination0.00E+00
6GO:0006468: protein phosphorylation4.80E-08
7GO:0031348: negative regulation of defense response2.44E-07
8GO:0010200: response to chitin3.58E-07
9GO:0009626: plant-type hypersensitive response4.26E-07
10GO:0060548: negative regulation of cell death5.13E-07
11GO:0046777: protein autophosphorylation4.67E-06
12GO:0019725: cellular homeostasis4.70E-06
13GO:0018105: peptidyl-serine phosphorylation1.12E-05
14GO:2000031: regulation of salicylic acid mediated signaling pathway1.35E-05
15GO:0000187: activation of MAPK activity3.71E-05
16GO:0048194: Golgi vesicle budding3.71E-05
17GO:0080142: regulation of salicylic acid biosynthetic process6.61E-05
18GO:0009266: response to temperature stimulus7.75E-05
19GO:0010225: response to UV-C1.04E-04
20GO:0034052: positive regulation of plant-type hypersensitive response1.04E-04
21GO:0035556: intracellular signal transduction1.09E-04
22GO:0042742: defense response to bacterium1.69E-04
23GO:2000022: regulation of jasmonic acid mediated signaling pathway1.93E-04
24GO:0009094: L-phenylalanine biosynthetic process2.05E-04
25GO:2000037: regulation of stomatal complex patterning2.05E-04
26GO:0009625: response to insect2.18E-04
27GO:0048482: plant ovule morphogenesis3.22E-04
28GO:0010365: positive regulation of ethylene biosynthetic process3.22E-04
29GO:0035352: NAD transmembrane transport3.22E-04
30GO:0019567: arabinose biosynthetic process3.22E-04
31GO:0010421: hydrogen peroxide-mediated programmed cell death3.22E-04
32GO:0051180: vitamin transport3.22E-04
33GO:0006562: proline catabolic process3.22E-04
34GO:0010482: regulation of epidermal cell division3.22E-04
35GO:0030974: thiamine pyrophosphate transport3.22E-04
36GO:1901183: positive regulation of camalexin biosynthetic process3.22E-04
37GO:0009270: response to humidity3.22E-04
38GO:0032469: endoplasmic reticulum calcium ion homeostasis3.22E-04
39GO:0050691: regulation of defense response to virus by host3.22E-04
40GO:0034975: protein folding in endoplasmic reticulum3.22E-04
41GO:0009751: response to salicylic acid4.92E-04
42GO:0010112: regulation of systemic acquired resistance4.95E-04
43GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.85E-04
44GO:0080185: effector dependent induction by symbiont of host immune response7.02E-04
45GO:0010618: aerenchyma formation7.02E-04
46GO:0044419: interspecies interaction between organisms7.02E-04
47GO:0015893: drug transport7.02E-04
48GO:0043132: NAD transport7.02E-04
49GO:0002221: pattern recognition receptor signaling pathway7.02E-04
50GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.02E-04
51GO:0010133: proline catabolic process to glutamate7.02E-04
52GO:0001666: response to hypoxia7.12E-04
53GO:0009682: induced systemic resistance7.88E-04
54GO:0009627: systemic acquired resistance8.18E-04
55GO:0012501: programmed cell death8.99E-04
56GO:0010229: inflorescence development1.02E-03
57GO:0018107: peptidyl-threonine phosphorylation1.02E-03
58GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.14E-03
59GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.14E-03
60GO:0007034: vacuolar transport1.14E-03
61GO:0034051: negative regulation of plant-type hypersensitive response1.14E-03
62GO:1900140: regulation of seedling development1.14E-03
63GO:0045793: positive regulation of cell size1.14E-03
64GO:0010186: positive regulation of cellular defense response1.14E-03
65GO:0046621: negative regulation of organ growth1.14E-03
66GO:0070301: cellular response to hydrogen peroxide1.63E-03
67GO:0072334: UDP-galactose transmembrane transport1.63E-03
68GO:0072583: clathrin-dependent endocytosis1.63E-03
69GO:0006537: glutamate biosynthetic process1.63E-03
70GO:0002679: respiratory burst involved in defense response1.63E-03
71GO:0015696: ammonium transport1.63E-03
72GO:0071323: cellular response to chitin1.63E-03
73GO:0051289: protein homotetramerization1.63E-03
74GO:0009814: defense response, incompatible interaction2.09E-03
75GO:0007166: cell surface receptor signaling pathway2.09E-03
76GO:0071456: cellular response to hypoxia2.09E-03
77GO:0045227: capsule polysaccharide biosynthetic process2.19E-03
78GO:0009652: thigmotropism2.19E-03
79GO:1902584: positive regulation of response to water deprivation2.19E-03
80GO:0072488: ammonium transmembrane transport2.19E-03
81GO:0033358: UDP-L-arabinose biosynthetic process2.19E-03
82GO:0051567: histone H3-K9 methylation2.19E-03
83GO:1901002: positive regulation of response to salt stress2.19E-03
84GO:2000038: regulation of stomatal complex development2.19E-03
85GO:0009617: response to bacterium2.23E-03
86GO:0010227: floral organ abscission2.28E-03
87GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.35E-03
88GO:0006952: defense response2.66E-03
89GO:0045927: positive regulation of growth2.80E-03
90GO:0009697: salicylic acid biosynthetic process2.80E-03
91GO:0048317: seed morphogenesis3.46E-03
92GO:1900425: negative regulation of defense response to bacterium3.46E-03
93GO:0009759: indole glucosinolate biosynthetic process3.46E-03
94GO:0010942: positive regulation of cell death3.46E-03
95GO:0010310: regulation of hydrogen peroxide metabolic process4.17E-03
96GO:2000067: regulation of root morphogenesis4.17E-03
97GO:0034389: lipid particle organization4.17E-03
98GO:0031930: mitochondria-nucleus signaling pathway4.17E-03
99GO:0042372: phylloquinone biosynthetic process4.17E-03
100GO:0045926: negative regulation of growth4.17E-03
101GO:0009612: response to mechanical stimulus4.17E-03
102GO:0010555: response to mannitol4.17E-03
103GO:0006464: cellular protein modification process4.67E-03
104GO:0071446: cellular response to salicylic acid stimulus4.92E-03
105GO:0080186: developmental vegetative growth4.92E-03
106GO:0010161: red light signaling pathway4.92E-03
107GO:0006904: vesicle docking involved in exocytosis4.95E-03
108GO:0009738: abscisic acid-activated signaling pathway5.39E-03
109GO:0035265: organ growth5.71E-03
110GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.71E-03
111GO:0030162: regulation of proteolysis5.71E-03
112GO:0032875: regulation of DNA endoreduplication5.71E-03
113GO:0009816: defense response to bacterium, incompatible interaction5.89E-03
114GO:0007186: G-protein coupled receptor signaling pathway6.55E-03
115GO:0030968: endoplasmic reticulum unfolded protein response6.55E-03
116GO:0008219: cell death7.27E-03
117GO:0046685: response to arsenic-containing substance7.42E-03
118GO:0051865: protein autoubiquitination7.42E-03
119GO:0090333: regulation of stomatal closure7.42E-03
120GO:0009056: catabolic process7.42E-03
121GO:0009835: fruit ripening7.42E-03
122GO:0009832: plant-type cell wall biogenesis7.64E-03
123GO:1900426: positive regulation of defense response to bacterium8.34E-03
124GO:0045087: innate immune response9.22E-03
125GO:0007064: mitotic sister chromatid cohesion9.30E-03
126GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process9.76E-03
127GO:0052544: defense response by callose deposition in cell wall1.03E-02
128GO:0019684: photosynthesis, light reaction1.03E-02
129GO:0009750: response to fructose1.03E-02
130GO:0048765: root hair cell differentiation1.03E-02
131GO:0006839: mitochondrial transport1.05E-02
132GO:0002213: defense response to insect1.13E-02
133GO:0010105: negative regulation of ethylene-activated signaling pathway1.13E-02
134GO:0051707: response to other organism1.19E-02
135GO:0000209: protein polyubiquitination1.24E-02
136GO:0055046: microgametogenesis1.24E-02
137GO:0002237: response to molecule of bacterial origin1.35E-02
138GO:0031347: regulation of defense response1.45E-02
139GO:0000165: MAPK cascade1.45E-02
140GO:0009969: xyloglucan biosynthetic process1.46E-02
141GO:0009225: nucleotide-sugar metabolic process1.46E-02
142GO:0070588: calcium ion transmembrane transport1.46E-02
143GO:0046854: phosphatidylinositol phosphorylation1.46E-02
144GO:0010053: root epidermal cell differentiation1.46E-02
145GO:0042538: hyperosmotic salinity response1.50E-02
146GO:0009116: nucleoside metabolic process1.70E-02
147GO:0080147: root hair cell development1.70E-02
148GO:0005992: trehalose biosynthetic process1.70E-02
149GO:0010026: trichome differentiation1.83E-02
150GO:0010431: seed maturation1.95E-02
151GO:0019915: lipid storage1.95E-02
152GO:0006979: response to oxidative stress1.96E-02
153GO:0016226: iron-sulfur cluster assembly2.08E-02
154GO:0009693: ethylene biosynthetic process2.22E-02
155GO:0006012: galactose metabolic process2.22E-02
156GO:0009624: response to nematode2.30E-02
157GO:0009306: protein secretion2.35E-02
158GO:0009742: brassinosteroid mediated signaling pathway2.44E-02
159GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.49E-02
160GO:0007165: signal transduction2.60E-02
161GO:0000271: polysaccharide biosynthetic process2.63E-02
162GO:0045489: pectin biosynthetic process2.78E-02
163GO:0009741: response to brassinosteroid2.78E-02
164GO:0009646: response to absence of light2.92E-02
165GO:0009749: response to glucose3.07E-02
166GO:0009845: seed germination3.11E-02
167GO:0009408: response to heat3.16E-02
168GO:0002229: defense response to oomycetes3.23E-02
169GO:0010193: response to ozone3.23E-02
170GO:0007264: small GTPase mediated signal transduction3.38E-02
171GO:0019760: glucosinolate metabolic process3.70E-02
172GO:0010150: leaf senescence3.96E-02
173GO:0051607: defense response to virus4.03E-02
174GO:0009911: positive regulation of flower development4.19E-02
175GO:0010029: regulation of seed germination4.36E-02
176GO:0006470: protein dephosphorylation4.52E-02
177GO:0048573: photoperiodism, flowering4.71E-02
178GO:0006950: response to stress4.71E-02
179GO:0016049: cell growth4.88E-02
RankGO TermAdjusted P value
1GO:0016301: kinase activity7.33E-10
2GO:0004674: protein serine/threonine kinase activity2.34E-07
3GO:0005524: ATP binding2.16E-06
4GO:0004664: prephenate dehydratase activity6.61E-05
5GO:0047769: arogenate dehydratase activity6.61E-05
6GO:0009931: calcium-dependent protein serine/threonine kinase activity8.60E-05
7GO:0004683: calmodulin-dependent protein kinase activity9.49E-05
8GO:0005509: calcium ion binding1.32E-04
9GO:0004672: protein kinase activity1.44E-04
10GO:0004012: phospholipid-translocating ATPase activity2.05E-04
11GO:0032050: clathrin heavy chain binding3.22E-04
12GO:1901149: salicylic acid binding3.22E-04
13GO:0090422: thiamine pyrophosphate transporter activity3.22E-04
14GO:0015085: calcium ion transmembrane transporter activity3.22E-04
15GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity3.22E-04
16GO:0004657: proline dehydrogenase activity3.22E-04
17GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.22E-04
18GO:0031127: alpha-(1,2)-fucosyltransferase activity3.22E-04
19GO:0004708: MAP kinase kinase activity3.36E-04
20GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity6.14E-04
21GO:0051724: NAD transporter activity7.02E-04
22GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.02E-03
23GO:0031683: G-protein beta/gamma-subunit complex binding1.14E-03
24GO:0001664: G-protein coupled receptor binding1.14E-03
25GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.53E-03
26GO:0033612: receptor serine/threonine kinase binding1.91E-03
27GO:0050373: UDP-arabinose 4-epimerase activity2.19E-03
28GO:0005459: UDP-galactose transmembrane transporter activity2.80E-03
29GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.80E-03
30GO:0005515: protein binding3.35E-03
31GO:0008519: ammonium transmembrane transporter activity3.46E-03
32GO:0005516: calmodulin binding3.55E-03
33GO:0003978: UDP-glucose 4-epimerase activity4.17E-03
34GO:0004656: procollagen-proline 4-dioxygenase activity4.17E-03
35GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity4.92E-03
36GO:0102425: myricetin 3-O-glucosyltransferase activity4.92E-03
37GO:0102360: daphnetin 3-O-glucosyltransferase activity4.92E-03
38GO:0008320: protein transmembrane transporter activity4.92E-03
39GO:0016597: amino acid binding5.26E-03
40GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity5.71E-03
41GO:0005544: calcium-dependent phospholipid binding5.71E-03
42GO:0047893: flavonol 3-O-glucosyltransferase activity5.71E-03
43GO:0004869: cysteine-type endopeptidase inhibitor activity5.71E-03
44GO:0004714: transmembrane receptor protein tyrosine kinase activity5.71E-03
45GO:0004430: 1-phosphatidylinositol 4-kinase activity6.55E-03
46GO:0004806: triglyceride lipase activity6.56E-03
47GO:0008417: fucosyltransferase activity7.42E-03
48GO:0016740: transferase activity8.08E-03
49GO:0047617: acyl-CoA hydrolase activity8.34E-03
50GO:0004713: protein tyrosine kinase activity9.30E-03
51GO:0004805: trehalose-phosphatase activity9.30E-03
52GO:0030234: enzyme regulator activity9.30E-03
53GO:0005543: phospholipid binding1.03E-02
54GO:0043565: sequence-specific DNA binding1.23E-02
55GO:0005388: calcium-transporting ATPase activity1.24E-02
56GO:0005262: calcium channel activity1.24E-02
57GO:0008061: chitin binding1.46E-02
58GO:0004190: aspartic-type endopeptidase activity1.46E-02
59GO:0043531: ADP binding1.66E-02
60GO:0043130: ubiquitin binding1.70E-02
61GO:0031418: L-ascorbic acid binding1.70E-02
62GO:0035251: UDP-glucosyltransferase activity1.95E-02
63GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.97E-02
64GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.08E-02
65GO:0003756: protein disulfide isomerase activity2.35E-02
66GO:0015035: protein disulfide oxidoreductase activity2.37E-02
67GO:0004871: signal transducer activity2.58E-02
68GO:0016758: transferase activity, transferring hexosyl groups2.80E-02
69GO:0030246: carbohydrate binding3.07E-02
70GO:0003924: GTPase activity3.16E-02
71GO:0004842: ubiquitin-protein transferase activity3.33E-02
72GO:0004197: cysteine-type endopeptidase activity3.38E-02
73GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.54E-02
74GO:0015297: antiporter activity3.78E-02
75GO:0005525: GTP binding4.10E-02
76GO:0008375: acetylglucosaminyltransferase activity4.53E-02
77GO:0004721: phosphoprotein phosphatase activity4.71E-02
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Gene type



Gene DE type