co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G67600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046680: response to DDT	0.00E+00
2	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
3	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
4	GO:0010398: xylogalacturonan metabolic process	0.00E+00
5	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
6	GO:0072722: response to amitrole	0.00E+00
7	GO:0006903: vesicle targeting	0.00E+00
8	GO:0046686: response to cadmium ion	9.44E-06
9	GO:0015031: protein transport	1.49E-04
10	GO:0006102: isocitrate metabolic process	1.51E-04
11	GO:0000032: cell wall mannoprotein biosynthetic process	1.88E-04
12	GO:0042964: thioredoxin reduction	1.88E-04
13	GO:1900384: regulation of flavonol biosynthetic process	1.88E-04
14	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.88E-04
15	GO:0060321: acceptance of pollen	1.88E-04
16	GO:0080026: response to indolebutyric acid	4.24E-04
17	GO:0015709: thiosulfate transport	4.24E-04
18	GO:0071422: succinate transmembrane transport	4.24E-04
19	GO:0046939: nucleotide phosphorylation	4.24E-04
20	GO:0009805: coumarin biosynthetic process	4.24E-04
21	GO:0010372: positive regulation of gibberellin biosynthetic process	4.24E-04
22	GO:0006099: tricarboxylic acid cycle	5.40E-04
23	GO:0000162: tryptophan biosynthetic process	6.80E-04
24	GO:0009062: fatty acid catabolic process	6.92E-04
25	GO:0090630: activation of GTPase activity	6.92E-04
26	GO:0006517: protein deglycosylation	6.92E-04
27	GO:0001927: exocyst assembly	6.92E-04
28	GO:0010272: response to silver ion	6.92E-04
29	GO:0033591: response to L-ascorbic acid	6.92E-04
30	GO:0006591: ornithine metabolic process	6.92E-04
31	GO:0006612: protein targeting to membrane	9.86E-04
32	GO:0006893: Golgi to plasma membrane transport	9.86E-04
33	GO:0051601: exocyst localization	9.86E-04
34	GO:0080024: indolebutyric acid metabolic process	9.86E-04
35	GO:0009298: GDP-mannose biosynthetic process	9.86E-04
36	GO:0015729: oxaloacetate transport	9.86E-04
37	GO:0009306: protein secretion	1.16E-03
38	GO:0006096: glycolytic process	1.25E-03
39	GO:0006878: cellular copper ion homeostasis	1.31E-03
40	GO:1902584: positive regulation of response to water deprivation	1.31E-03
41	GO:0071423: malate transmembrane transport	1.66E-03
42	GO:0009823: cytokinin catabolic process	1.66E-03
43	GO:0046283: anthocyanin-containing compound metabolic process	1.66E-03
44	GO:0006564: L-serine biosynthetic process	1.66E-03
45	GO:0005513: detection of calcium ion	1.66E-03
46	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.66E-03
47	GO:0006465: signal peptide processing	1.66E-03
48	GO:0045927: positive regulation of growth	1.66E-03
49	GO:0009851: auxin biosynthetic process	1.68E-03
50	GO:0006886: intracellular protein transport	1.95E-03
51	GO:1901657: glycosyl compound metabolic process	2.04E-03
52	GO:0030163: protein catabolic process	2.04E-03
53	GO:0009228: thiamine biosynthetic process	2.05E-03
54	GO:0035435: phosphate ion transmembrane transport	2.05E-03
55	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.05E-03
56	GO:0006555: methionine metabolic process	2.05E-03
57	GO:0034389: lipid particle organization	2.46E-03
58	GO:0009612: response to mechanical stimulus	2.46E-03
59	GO:0009082: branched-chain amino acid biosynthetic process	2.46E-03
60	GO:0009099: valine biosynthetic process	2.46E-03
61	GO:0019509: L-methionine salvage from methylthioadenosine	2.46E-03
62	GO:0006511: ubiquitin-dependent protein catabolic process	2.49E-03
63	GO:0009751: response to salicylic acid	2.50E-03
64	GO:0009615: response to virus	2.58E-03
65	GO:0008272: sulfate transport	2.90E-03
66	GO:0080186: developmental vegetative growth	2.90E-03
67	GO:0071669: plant-type cell wall organization or biogenesis	2.90E-03
68	GO:0006888: ER to Golgi vesicle-mediated transport	3.04E-03
69	GO:0006402: mRNA catabolic process	3.36E-03
70	GO:0006491: N-glycan processing	3.36E-03
71	GO:0019430: removal of superoxide radicals	3.84E-03
72	GO:0009097: isoleucine biosynthetic process	3.84E-03
73	GO:0009699: phenylpropanoid biosynthetic process	3.84E-03
74	GO:0006002: fructose 6-phosphate metabolic process	3.84E-03
75	GO:0007186: G-protein coupled receptor signaling pathway	3.84E-03
76	GO:0009821: alkaloid biosynthetic process	4.35E-03
77	GO:0046685: response to arsenic-containing substance	4.35E-03
78	GO:0009098: leucine biosynthetic process	4.87E-03
79	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.87E-03
80	GO:0006887: exocytosis	5.05E-03
81	GO:0006032: chitin catabolic process	5.42E-03
82	GO:0009688: abscisic acid biosynthetic process	5.42E-03
83	GO:0043069: negative regulation of programmed cell death	5.42E-03
84	GO:0000272: polysaccharide catabolic process	5.99E-03
85	GO:0052544: defense response by callose deposition in cell wall	5.99E-03
86	GO:0009636: response to toxic substance	6.15E-03
87	GO:0016925: protein sumoylation	6.58E-03
88	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	6.58E-03
89	GO:0006790: sulfur compound metabolic process	6.58E-03
90	GO:0009846: pollen germination	6.88E-03
91	GO:0006807: nitrogen compound metabolic process	7.19E-03
92	GO:0055046: microgametogenesis	7.19E-03
93	GO:0051603: proteolysis involved in cellular protein catabolic process	7.64E-03
94	GO:0016192: vesicle-mediated transport	7.71E-03
95	GO:0034605: cellular response to heat	7.82E-03
96	GO:0019853: L-ascorbic acid biosynthetic process	8.47E-03
97	GO:0046854: phosphatidylinositol phosphorylation	8.47E-03
98	GO:0010053: root epidermal cell differentiation	8.47E-03
99	GO:0007031: peroxisome organization	8.47E-03
100	GO:0007030: Golgi organization	8.47E-03
101	GO:0010167: response to nitrate	8.47E-03
102	GO:0006874: cellular calcium ion homeostasis	1.05E-02
103	GO:0016998: cell wall macromolecule catabolic process	1.13E-02
104	GO:0015992: proton transport	1.13E-02
105	GO:0019915: lipid storage	1.13E-02
106	GO:0030433: ubiquitin-dependent ERAD pathway	1.20E-02
107	GO:0019748: secondary metabolic process	1.20E-02
108	GO:0010227: floral organ abscission	1.28E-02
109	GO:0009561: megagametogenesis	1.35E-02
110	GO:0009058: biosynthetic process	1.39E-02
111	GO:0051028: mRNA transport	1.43E-02
112	GO:0045489: pectin biosynthetic process	1.60E-02
113	GO:0009646: response to absence of light	1.68E-02
114	GO:0006635: fatty acid beta-oxidation	1.85E-02
115	GO:0031047: gene silencing by RNA	1.94E-02
116	GO:0009630: gravitropism	1.94E-02
117	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.04E-02
118	GO:0006464: cellular protein modification process	2.13E-02
119	GO:0006914: autophagy	2.13E-02
120	GO:0009567: double fertilization forming a zygote and endosperm	2.13E-02
121	GO:0006904: vesicle docking involved in exocytosis	2.22E-02
122	GO:0009627: systemic acquired resistance	2.61E-02
123	GO:0016049: cell growth	2.81E-02
124	GO:0048767: root hair elongation	3.02E-02
125	GO:0009860: pollen tube growth	3.04E-02
126	GO:0006499: N-terminal protein myristoylation	3.12E-02
127	GO:0009407: toxin catabolic process	3.12E-02
128	GO:0010043: response to zinc ion	3.23E-02
129	GO:0007568: aging	3.23E-02
130	GO:0045087: innate immune response	3.45E-02
131	GO:0006839: mitochondrial transport	3.78E-02
132	GO:0009651: response to salt stress	3.97E-02
133	GO:0009926: auxin polar transport	4.13E-02
134	GO:0009744: response to sucrose	4.13E-02
135	GO:0051707: response to other organism	4.13E-02
136	GO:0000209: protein polyubiquitination	4.24E-02
137	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.73E-02
138	GO:0031347: regulation of defense response	4.73E-02
139	GO:0009664: plant-type cell wall organization	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0016504: peptidase activator activity	0.00E+00
2	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
3	GO:0070577: lysine-acetylated histone binding	0.00E+00
4	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.44E-05
5	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	1.88E-04
6	GO:0019786: Atg8-specific protease activity	1.88E-04
7	GO:0048037: cofactor binding	1.88E-04
8	GO:0004476: mannose-6-phosphate isomerase activity	1.88E-04
9	GO:0016229: steroid dehydrogenase activity	1.88E-04
10	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	1.88E-04
11	GO:0010013: N-1-naphthylphthalamic acid binding	1.88E-04
12	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.88E-04
13	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.88E-04
14	GO:0070401: NADP+ binding	1.88E-04
15	GO:0030955: potassium ion binding	2.73E-04
16	GO:0004743: pyruvate kinase activity	2.73E-04
17	GO:0019779: Atg8 activating enzyme activity	4.24E-04
18	GO:0015117: thiosulfate transmembrane transporter activity	4.24E-04
19	GO:0019172: glyoxalase III activity	4.24E-04
20	GO:1901677: phosphate transmembrane transporter activity	4.24E-04
21	GO:0004776: succinate-CoA ligase (GDP-forming) activity	4.24E-04
22	GO:0052739: phosphatidylserine 1-acylhydrolase activity	4.24E-04
23	GO:0010297: heteropolysaccharide binding	4.24E-04
24	GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity	4.24E-04
25	GO:0004775: succinate-CoA ligase (ADP-forming) activity	4.24E-04
26	GO:0015141: succinate transmembrane transporter activity	6.92E-04
27	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	6.92E-04
28	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	6.92E-04
29	GO:0005310: dicarboxylic acid transmembrane transporter activity	6.92E-04
30	GO:0004298: threonine-type endopeptidase activity	9.07E-04
31	GO:0015131: oxaloacetate transmembrane transporter activity	9.86E-04
32	GO:0052656: L-isoleucine transaminase activity	9.86E-04
33	GO:0004165: dodecenoyl-CoA delta-isomerase activity	9.86E-04
34	GO:0052654: L-leucine transaminase activity	9.86E-04
35	GO:0017077: oxidative phosphorylation uncoupler activity	9.86E-04
36	GO:0052655: L-valine transaminase activity	9.86E-04
37	GO:0019201: nucleotide kinase activity	9.86E-04
38	GO:0000287: magnesium ion binding	9.96E-04
39	GO:0070628: proteasome binding	1.31E-03
40	GO:0004930: G-protein coupled receptor activity	1.31E-03
41	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.31E-03
42	GO:0004031: aldehyde oxidase activity	1.31E-03
43	GO:0050302: indole-3-acetaldehyde oxidase activity	1.31E-03
44	GO:0019776: Atg8 ligase activity	1.31E-03
45	GO:0004834: tryptophan synthase activity	1.31E-03
46	GO:0004084: branched-chain-amino-acid transaminase activity	1.31E-03
47	GO:0031386: protein tag	1.66E-03
48	GO:0008374: O-acyltransferase activity	1.66E-03
49	GO:0019139: cytokinin dehydrogenase activity	1.66E-03
50	GO:0004518: nuclease activity	1.92E-03
51	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	2.05E-03
52	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	2.05E-03
53	GO:0035252: UDP-xylosyltransferase activity	2.05E-03
54	GO:0036402: proteasome-activating ATPase activity	2.05E-03
55	GO:0004017: adenylate kinase activity	2.46E-03
56	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.46E-03
57	GO:0008320: protein transmembrane transporter activity	2.90E-03
58	GO:0003872: 6-phosphofructokinase activity	2.90E-03
59	GO:0015140: malate transmembrane transporter activity	2.90E-03
60	GO:0102483: scopolin beta-glucosidase activity	3.04E-03
61	GO:0004033: aldo-keto reductase (NADP) activity	3.36E-03
62	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	3.84E-03
63	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.88E-03
64	GO:0003746: translation elongation factor activity	4.26E-03
65	GO:0008422: beta-glucosidase activity	4.64E-03
66	GO:0016844: strictosidine synthase activity	4.87E-03
67	GO:0004568: chitinase activity	5.42E-03
68	GO:0004177: aminopeptidase activity	5.99E-03
69	GO:0008559: xenobiotic-transporting ATPase activity	5.99E-03
70	GO:0005198: structural molecule activity	6.15E-03
71	GO:0015116: sulfate transmembrane transporter activity	6.58E-03
72	GO:0051287: NAD binding	6.63E-03
73	GO:0031072: heat shock protein binding	7.19E-03
74	GO:0008131: primary amine oxidase activity	7.82E-03
75	GO:0017025: TBP-class protein binding	8.47E-03
76	GO:0008061: chitin binding	8.47E-03
77	GO:0005217: intracellular ligand-gated ion channel activity	8.47E-03
78	GO:0004970: ionotropic glutamate receptor activity	8.47E-03
79	GO:0005507: copper ion binding	1.04E-02
80	GO:0005199: structural constituent of cell wall	1.60E-02
81	GO:0008080: N-acetyltransferase activity	1.60E-02
82	GO:0004791: thioredoxin-disulfide reductase activity	1.68E-02
83	GO:0003824: catalytic activity	2.04E-02
84	GO:0008237: metallopeptidase activity	2.22E-02
85	GO:0051213: dioxygenase activity	2.41E-02
86	GO:0008375: acetylglucosaminyltransferase activity	2.61E-02
87	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.71E-02
88	GO:0046872: metal ion binding	2.81E-02
89	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.91E-02
90	GO:0005096: GTPase activator activity	3.02E-02
91	GO:0043531: ADP binding	3.10E-02
92	GO:0050660: flavin adenine dinucleotide binding	3.27E-02
93	GO:0008233: peptidase activity	3.44E-02
94	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.45E-02
95	GO:0003993: acid phosphatase activity	3.56E-02
96	GO:0061630: ubiquitin protein ligase activity	3.68E-02
97	GO:0042393: histone binding	3.78E-02
98	GO:0004364: glutathione transferase activity	4.01E-02
99	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.18E-02
100	GO:0051537: 2 iron, 2 sulfur cluster binding	4.36E-02
101	GO:0004722: protein serine/threonine phosphatase activity	4.58E-02
102	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0005829: cytosol	3.21E-06
2	GO:0000502: proteasome complex	8.12E-06
3	GO:0005839: proteasome core complex	5.45E-05
4	GO:0016442: RISC complex	1.88E-04
5	GO:0031090: organelle membrane	2.29E-04
6	GO:0048471: perinuclear region of cytoplasm	3.73E-04
7	GO:0030132: clathrin coat of coated pit	6.92E-04
8	GO:0009530: primary cell wall	6.92E-04
9	GO:0030130: clathrin coat of trans-Golgi network vesicle	6.92E-04
10	GO:0005737: cytoplasm	7.88E-04
11	GO:0005775: vacuolar lumen	9.86E-04
12	GO:0005776: autophagosome	1.31E-03
13	GO:0005945: 6-phosphofructokinase complex	1.66E-03
14	GO:0000145: exocyst	1.92E-03
15	GO:0031597: cytosolic proteasome complex	2.46E-03
16	GO:0030173: integral component of Golgi membrane	2.46E-03
17	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.90E-03
18	GO:0031595: nuclear proteasome complex	2.90E-03
19	GO:0000421: autophagosome membrane	3.36E-03
20	GO:0031982: vesicle	3.36E-03
21	GO:0005811: lipid particle	3.84E-03
22	GO:0019773: proteasome core complex, alpha-subunit complex	3.84E-03
23	GO:0031901: early endosome membrane	4.35E-03
24	GO:0010494: cytoplasmic stress granule	4.35E-03
25	GO:0008540: proteasome regulatory particle, base subcomplex	4.87E-03
26	GO:0005773: vacuole	5.08E-03
27	GO:0008541: proteasome regulatory particle, lid subcomplex	5.99E-03
28	GO:0005856: cytoskeleton	6.15E-03
29	GO:0005635: nuclear envelope	7.91E-03
30	GO:0005886: plasma membrane	8.97E-03
31	GO:0031410: cytoplasmic vesicle	1.20E-02
32	GO:0005802: trans-Golgi network	1.25E-02
33	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.35E-02
34	GO:0009524: phragmoplast	1.39E-02
35	GO:0005768: endosome	1.51E-02
36	GO:0005774: vacuolar membrane	1.55E-02
37	GO:0005794: Golgi apparatus	1.75E-02
38	GO:0016592: mediator complex	1.94E-02
39	GO:0005618: cell wall	2.01E-02
40	GO:0032580: Golgi cisterna membrane	2.13E-02
41	GO:0005778: peroxisomal membrane	2.22E-02
42	GO:0005783: endoplasmic reticulum	2.40E-02
43	GO:0000932: P-body	2.41E-02
44	GO:0005643: nuclear pore	2.91E-02
45	GO:0000325: plant-type vacuole	3.23E-02