GO Enrichment Analysis of Co-expressed Genes with
AT5G67500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.66E-11 |
| 2 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 6.25E-06 |
| 3 | GO:0097502: mannosylation | 4.60E-05 |
| 4 | GO:0019628: urate catabolic process | 4.60E-05 |
| 5 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 4.60E-05 |
| 6 | GO:0006144: purine nucleobase metabolic process | 4.60E-05 |
| 7 | GO:0080120: CAAX-box protein maturation | 4.60E-05 |
| 8 | GO:0071586: CAAX-box protein processing | 4.60E-05 |
| 9 | GO:0046686: response to cadmium ion | 5.32E-05 |
| 10 | GO:0051603: proteolysis involved in cellular protein catabolic process | 8.51E-05 |
| 11 | GO:0000162: tryptophan biosynthetic process | 9.77E-05 |
| 12 | GO:0006695: cholesterol biosynthetic process | 1.13E-04 |
| 13 | GO:0010372: positive regulation of gibberellin biosynthetic process | 1.13E-04 |
| 14 | GO:0051788: response to misfolded protein | 1.13E-04 |
| 15 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.50E-04 |
| 16 | GO:0043617: cellular response to sucrose starvation | 1.95E-04 |
| 17 | GO:0009647: skotomorphogenesis | 2.85E-04 |
| 18 | GO:0001676: long-chain fatty acid metabolic process | 2.85E-04 |
| 19 | GO:0010363: regulation of plant-type hypersensitive response | 3.84E-04 |
| 20 | GO:0006564: L-serine biosynthetic process | 4.88E-04 |
| 21 | GO:0043248: proteasome assembly | 5.98E-04 |
| 22 | GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity | 5.98E-04 |
| 23 | GO:0000054: ribosomal subunit export from nucleus | 7.13E-04 |
| 24 | GO:0007050: cell cycle arrest | 8.33E-04 |
| 25 | GO:0048528: post-embryonic root development | 8.33E-04 |
| 26 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 9.57E-04 |
| 27 | GO:0006402: mRNA catabolic process | 9.57E-04 |
| 28 | GO:0031540: regulation of anthocyanin biosynthetic process | 9.57E-04 |
| 29 | GO:0090332: stomatal closure | 1.36E-03 |
| 30 | GO:0034605: cellular response to heat | 2.14E-03 |
| 31 | GO:0007031: peroxisome organization | 2.31E-03 |
| 32 | GO:0034976: response to endoplasmic reticulum stress | 2.49E-03 |
| 33 | GO:0042023: DNA endoreduplication | 2.49E-03 |
| 34 | GO:0009411: response to UV | 3.43E-03 |
| 35 | GO:0040007: growth | 3.43E-03 |
| 36 | GO:0009561: megagametogenesis | 3.63E-03 |
| 37 | GO:0009306: protein secretion | 3.63E-03 |
| 38 | GO:0010089: xylem development | 3.63E-03 |
| 39 | GO:0006606: protein import into nucleus | 4.04E-03 |
| 40 | GO:0048868: pollen tube development | 4.25E-03 |
| 41 | GO:0009646: response to absence of light | 4.47E-03 |
| 42 | GO:0048825: cotyledon development | 4.68E-03 |
| 43 | GO:0010193: response to ozone | 4.91E-03 |
| 44 | GO:0016132: brassinosteroid biosynthetic process | 4.91E-03 |
| 45 | GO:0031047: gene silencing by RNA | 5.13E-03 |
| 46 | GO:0030163: protein catabolic process | 5.37E-03 |
| 47 | GO:0009567: double fertilization forming a zygote and endosperm | 5.60E-03 |
| 48 | GO:0016579: protein deubiquitination | 6.08E-03 |
| 49 | GO:0045454: cell redox homeostasis | 6.23E-03 |
| 50 | GO:0016126: sterol biosynthetic process | 6.32E-03 |
| 51 | GO:0006950: response to stress | 7.08E-03 |
| 52 | GO:0010311: lateral root formation | 7.87E-03 |
| 53 | GO:0010043: response to zinc ion | 8.41E-03 |
| 54 | GO:0055114: oxidation-reduction process | 8.87E-03 |
| 55 | GO:0006631: fatty acid metabolic process | 1.01E-02 |
| 56 | GO:0009744: response to sucrose | 1.07E-02 |
| 57 | GO:0009809: lignin biosynthetic process | 1.32E-02 |
| 58 | GO:0006486: protein glycosylation | 1.32E-02 |
| 59 | GO:0009736: cytokinin-activated signaling pathway | 1.32E-02 |
| 60 | GO:0009553: embryo sac development | 1.66E-02 |
| 61 | GO:0042744: hydrogen peroxide catabolic process | 2.18E-02 |
| 62 | GO:0006413: translational initiation | 2.38E-02 |
| 63 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.71E-02 |
| 64 | GO:0007166: cell surface receptor signaling pathway | 2.75E-02 |
| 65 | GO:0009826: unidimensional cell growth | 3.32E-02 |
| 66 | GO:0048366: leaf development | 3.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity | 0.00E+00 |
| 2 | GO:0000033: alpha-1,3-mannosyltransferase activity | 0.00E+00 |
| 3 | GO:0008418: protein-N-terminal asparagine amidohydrolase activity | 0.00E+00 |
| 4 | GO:0009918: sterol delta7 reductase activity | 0.00E+00 |
| 5 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 6 | GO:0047598: 7-dehydrocholesterol reductase activity | 0.00E+00 |
| 7 | GO:0004298: threonine-type endopeptidase activity | 1.17E-10 |
| 8 | GO:0008233: peptidase activity | 1.09E-07 |
| 9 | GO:0036402: proteasome-activating ATPase activity | 6.25E-06 |
| 10 | GO:0004048: anthranilate phosphoribosyltransferase activity | 4.60E-05 |
| 11 | GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity | 4.60E-05 |
| 12 | GO:0017025: TBP-class protein binding | 8.62E-05 |
| 13 | GO:0004640: phosphoribosylanthranilate isomerase activity | 1.13E-04 |
| 14 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.13E-04 |
| 15 | GO:0004848: ureidoglycolate hydrolase activity | 1.95E-04 |
| 16 | GO:0004557: alpha-galactosidase activity | 1.95E-04 |
| 17 | GO:0052692: raffinose alpha-galactosidase activity | 1.95E-04 |
| 18 | GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 1.95E-04 |
| 19 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 2.85E-04 |
| 20 | GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity | 5.98E-04 |
| 21 | GO:0030332: cyclin binding | 5.98E-04 |
| 22 | GO:0102391: decanoate--CoA ligase activity | 7.13E-04 |
| 23 | GO:0004656: procollagen-proline 4-dioxygenase activity | 7.13E-04 |
| 24 | GO:0051920: peroxiredoxin activity | 7.13E-04 |
| 25 | GO:0004467: long-chain fatty acid-CoA ligase activity | 8.33E-04 |
| 26 | GO:0016209: antioxidant activity | 9.57E-04 |
| 27 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 1.51E-03 |
| 28 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.98E-03 |
| 29 | GO:0004175: endopeptidase activity | 2.14E-03 |
| 30 | GO:0031418: L-ascorbic acid binding | 2.67E-03 |
| 31 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 3.04E-03 |
| 32 | GO:0003756: protein disulfide isomerase activity | 3.63E-03 |
| 33 | GO:0004601: peroxidase activity | 4.21E-03 |
| 34 | GO:0016853: isomerase activity | 4.47E-03 |
| 35 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 4.91E-03 |
| 36 | GO:0004518: nuclease activity | 5.13E-03 |
| 37 | GO:0016597: amino acid binding | 6.08E-03 |
| 38 | GO:0003924: GTPase activity | 7.68E-03 |
| 39 | GO:0004222: metalloendopeptidase activity | 8.14E-03 |
| 40 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 8.96E-03 |
| 41 | GO:0016887: ATPase activity | 1.19E-02 |
| 42 | GO:0051287: NAD binding | 1.23E-02 |
| 43 | GO:0016787: hydrolase activity | 1.40E-02 |
| 44 | GO:0030246: carbohydrate binding | 1.84E-02 |
| 45 | GO:0005525: GTP binding | 2.25E-02 |
| 46 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.38E-02 |
| 47 | GO:0003743: translation initiation factor activity | 2.80E-02 |
| 48 | GO:0005524: ATP binding | 3.11E-02 |
| 49 | GO:0000287: magnesium ion binding | 3.37E-02 |
| 50 | GO:0046872: metal ion binding | 3.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 1.06E-13 |
| 2 | GO:0005839: proteasome core complex | 1.17E-10 |
| 3 | GO:0031597: cytosolic proteasome complex | 9.07E-06 |
| 4 | GO:0031595: nuclear proteasome complex | 1.25E-05 |
| 5 | GO:0019773: proteasome core complex, alpha-subunit complex | 2.16E-05 |
| 6 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.34E-05 |
| 7 | GO:0016442: RISC complex | 4.60E-05 |
| 8 | GO:0030176: integral component of endoplasmic reticulum membrane | 8.62E-05 |
| 9 | GO:0001673: male germ cell nucleus | 1.13E-04 |
| 10 | GO:0046861: glyoxysomal membrane | 1.95E-04 |
| 11 | GO:0005838: proteasome regulatory particle | 1.95E-04 |
| 12 | GO:0005773: vacuole | 8.02E-04 |
| 13 | GO:0009514: glyoxysome | 1.09E-03 |
| 14 | GO:0005635: nuclear envelope | 1.22E-03 |
| 15 | GO:0010494: cytoplasmic stress granule | 1.22E-03 |
| 16 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.66E-03 |
| 17 | GO:0048471: perinuclear region of cytoplasm | 1.66E-03 |
| 18 | GO:0005829: cytosol | 2.06E-03 |
| 19 | GO:0005622: intracellular | 4.51E-03 |
| 20 | GO:0005783: endoplasmic reticulum | 5.14E-03 |
| 21 | GO:0000932: P-body | 6.32E-03 |
| 22 | GO:0005774: vacuolar membrane | 6.38E-03 |
| 23 | GO:0048046: apoplast | 6.86E-03 |
| 24 | GO:0005789: endoplasmic reticulum membrane | 9.11E-03 |
| 25 | GO:0005777: peroxisome | 1.57E-02 |
| 26 | GO:0005634: nucleus | 1.90E-02 |
| 27 | GO:0005654: nucleoplasm | 1.95E-02 |
| 28 | GO:0005623: cell | 2.03E-02 |
| 29 | GO:0005759: mitochondrial matrix | 2.34E-02 |
| 30 | GO:0005618: cell wall | 3.04E-02 |
| 31 | GO:0009536: plastid | 3.40E-02 |
| 32 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.65E-02 |
| 33 | GO:0005730: nucleolus | 4.67E-02 |