co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G67390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
2	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
3	GO:0061157: mRNA destabilization	0.00E+00
4	GO:0043392: negative regulation of DNA binding	0.00E+00
5	GO:0042407: cristae formation	0.00E+00
6	GO:0005983: starch catabolic process	5.42E-06
7	GO:0010480: microsporocyte differentiation	1.22E-04
8	GO:0000023: maltose metabolic process	1.22E-04
9	GO:0000025: maltose catabolic process	1.22E-04
10	GO:0005980: glycogen catabolic process	1.22E-04
11	GO:0030198: extracellular matrix organization	1.22E-04
12	GO:0046520: sphingoid biosynthetic process	1.22E-04
13	GO:0006006: glucose metabolic process	2.65E-04
14	GO:0006741: NADP biosynthetic process	2.82E-04
15	GO:0009629: response to gravity	2.82E-04
16	GO:0019388: galactose catabolic process	2.82E-04
17	GO:0007154: cell communication	2.82E-04
18	GO:0071497: cellular response to freezing	2.82E-04
19	GO:0006568: tryptophan metabolic process	2.82E-04
20	GO:0006423: cysteinyl-tRNA aminoacylation	2.82E-04
21	GO:0019674: NAD metabolic process	4.65E-04
22	GO:0019419: sulfate reduction	4.65E-04
23	GO:0009590: detection of gravity	6.66E-04
24	GO:0010321: regulation of vegetative phase change	6.66E-04
25	GO:0019363: pyridine nucleotide biosynthetic process	6.66E-04
26	GO:1902347: response to strigolactone	8.84E-04
27	GO:0042938: dipeptide transport	8.84E-04
28	GO:1901141: regulation of lignin biosynthetic process	8.84E-04
29	GO:0022622: root system development	8.84E-04
30	GO:0019252: starch biosynthetic process	9.36E-04
31	GO:0010405: arabinogalactan protein metabolic process	1.37E-03
32	GO:0042549: photosystem II stabilization	1.37E-03
33	GO:0009959: negative gravitropism	1.37E-03
34	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.37E-03
35	GO:0006458: 'de novo' protein folding	1.64E-03
36	GO:0048509: regulation of meristem development	1.64E-03
37	GO:0030488: tRNA methylation	1.64E-03
38	GO:0042026: protein refolding	1.64E-03
39	GO:2000033: regulation of seed dormancy process	1.64E-03
40	GO:0032880: regulation of protein localization	1.92E-03
41	GO:0010161: red light signaling pathway	1.92E-03
42	GO:0048437: floral organ development	1.92E-03
43	GO:0009704: de-etiolation	2.22E-03
44	GO:0005978: glycogen biosynthetic process	2.22E-03
45	GO:0046620: regulation of organ growth	2.22E-03
46	GO:0010100: negative regulation of photomorphogenesis	2.54E-03
47	GO:0010099: regulation of photomorphogenesis	2.54E-03
48	GO:0010206: photosystem II repair	2.87E-03
49	GO:0006783: heme biosynthetic process	2.87E-03
50	GO:0000902: cell morphogenesis	2.87E-03
51	GO:0009409: response to cold	2.89E-03
52	GO:0009640: photomorphogenesis	2.99E-03
53	GO:0043067: regulation of programmed cell death	3.21E-03
54	GO:1900865: chloroplast RNA modification	3.21E-03
55	GO:0000103: sulfate assimilation	3.57E-03
56	GO:0048229: gametophyte development	3.94E-03
57	GO:0010015: root morphogenesis	3.94E-03
58	GO:0000038: very long-chain fatty acid metabolic process	3.94E-03
59	GO:0006857: oligopeptide transport	4.30E-03
60	GO:0015706: nitrate transport	4.32E-03
61	GO:0010628: positive regulation of gene expression	4.71E-03
62	GO:0010075: regulation of meristem growth	4.71E-03
63	GO:0009767: photosynthetic electron transport chain	4.71E-03
64	GO:0010588: cotyledon vascular tissue pattern formation	4.71E-03
65	GO:2000012: regulation of auxin polar transport	4.71E-03
66	GO:0010102: lateral root morphogenesis	4.71E-03
67	GO:0009266: response to temperature stimulus	5.12E-03
68	GO:0009934: regulation of meristem structural organization	5.12E-03
69	GO:0006541: glutamine metabolic process	5.12E-03
70	GO:0090351: seedling development	5.54E-03
71	GO:0000162: tryptophan biosynthetic process	5.98E-03
72	GO:0019344: cysteine biosynthetic process	6.42E-03
73	GO:0006338: chromatin remodeling	6.42E-03
74	GO:0010187: negative regulation of seed germination	6.42E-03
75	GO:0061077: chaperone-mediated protein folding	7.34E-03
76	GO:0048278: vesicle docking	7.34E-03
77	GO:0031348: negative regulation of defense response	7.81E-03
78	GO:0009686: gibberellin biosynthetic process	8.30E-03
79	GO:0009733: response to auxin	8.35E-03
80	GO:0045492: xylan biosynthetic process	8.80E-03
81	GO:0008284: positive regulation of cell proliferation	9.31E-03
82	GO:0080022: primary root development	9.83E-03
83	GO:0010087: phloem or xylem histogenesis	9.83E-03
84	GO:0048653: anther development	9.83E-03
85	GO:0042335: cuticle development	9.83E-03
86	GO:0009958: positive gravitropism	1.04E-02
87	GO:0010197: polar nucleus fusion	1.04E-02
88	GO:0009741: response to brassinosteroid	1.04E-02
89	GO:0009960: endosperm development	1.04E-02
90	GO:0010305: leaf vascular tissue pattern formation	1.04E-02
91	GO:0061025: membrane fusion	1.09E-02
92	GO:0009739: response to gibberellin	1.10E-02
93	GO:0071554: cell wall organization or biogenesis	1.20E-02
94	GO:1901657: glycosyl compound metabolic process	1.32E-02
95	GO:0005975: carbohydrate metabolic process	1.32E-02
96	GO:0009567: double fertilization forming a zygote and endosperm	1.38E-02
97	GO:0010252: auxin homeostasis	1.38E-02
98	GO:0010027: thylakoid membrane organization	1.56E-02
99	GO:0006457: protein folding	1.57E-02
100	GO:0010029: regulation of seed germination	1.62E-02
101	GO:0006906: vesicle fusion	1.69E-02
102	GO:0015995: chlorophyll biosynthetic process	1.75E-02
103	GO:0009723: response to ethylene	1.77E-02
104	GO:0000160: phosphorelay signal transduction system	1.95E-02
105	GO:0009813: flavonoid biosynthetic process	1.95E-02
106	GO:0048527: lateral root development	2.09E-02
107	GO:0009631: cold acclimation	2.09E-02
108	GO:0045892: negative regulation of transcription, DNA-templated	2.31E-02
109	GO:0006839: mitochondrial transport	2.44E-02
110	GO:0006887: exocytosis	2.52E-02
111	GO:0006631: fatty acid metabolic process	2.52E-02
112	GO:0032259: methylation	2.69E-02
113	GO:0016042: lipid catabolic process	2.73E-02
114	GO:0006855: drug transmembrane transport	2.98E-02
115	GO:0030154: cell differentiation	3.05E-02
116	GO:0031347: regulation of defense response	3.06E-02
117	GO:0009736: cytokinin-activated signaling pathway	3.30E-02
118	GO:0006508: proteolysis	3.74E-02
119	GO:0048367: shoot system development	3.80E-02
120	GO:0009734: auxin-activated signaling pathway	3.94E-02
121	GO:0009620: response to fungus	3.98E-02
122	GO:0009740: gibberellic acid mediated signaling pathway	4.06E-02
123	GO:0009624: response to nematode	4.24E-02
124	GO:0006396: RNA processing	4.33E-02
125	GO:0009735: response to cytokinin	4.53E-02
126	GO:0009416: response to light stimulus	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0097100: supercoiled DNA binding	0.00E+00
2	GO:0005201: extracellular matrix structural constituent	0.00E+00
3	GO:0005363: maltose transmembrane transporter activity	0.00E+00
4	GO:0010303: limit dextrinase activity	0.00E+00
5	GO:0051060: pullulanase activity	0.00E+00
6	GO:0004134: 4-alpha-glucanotransferase activity	1.22E-04
7	GO:0004645: phosphorylase activity	1.22E-04
8	GO:0042736: NADH kinase activity	1.22E-04
9	GO:0000170: sphingosine hydroxylase activity	1.22E-04
10	GO:0050139: nicotinate-N-glucosyltransferase activity	1.22E-04
11	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.22E-04
12	GO:0008184: glycogen phosphorylase activity	1.22E-04
13	GO:0010313: phytochrome binding	1.22E-04
14	GO:0009973: adenylyl-sulfate reductase activity	2.82E-04
15	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	2.82E-04
16	GO:0004614: phosphoglucomutase activity	2.82E-04
17	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	2.82E-04
18	GO:0004817: cysteine-tRNA ligase activity	2.82E-04
19	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	2.82E-04
20	GO:0042284: sphingolipid delta-4 desaturase activity	2.82E-04
21	GO:0005504: fatty acid binding	4.65E-04
22	GO:0004049: anthranilate synthase activity	4.65E-04
23	GO:0045430: chalcone isomerase activity	8.84E-04
24	GO:0042936: dipeptide transporter activity	8.84E-04
25	GO:0004556: alpha-amylase activity	1.37E-03
26	GO:0080030: methyl indole-3-acetate esterase activity	1.37E-03
27	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.37E-03
28	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.64E-03
29	GO:0003951: NAD+ kinase activity	2.54E-03
30	GO:0008173: RNA methyltransferase activity	2.54E-03
31	GO:0044183: protein binding involved in protein folding	3.94E-03
32	GO:0008083: growth factor activity	5.12E-03
33	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	5.98E-03
34	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	5.98E-03
35	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	5.98E-03
36	GO:0033612: receptor serine/threonine kinase binding	7.34E-03
37	GO:0004252: serine-type endopeptidase activity	7.92E-03
38	GO:0003727: single-stranded RNA binding	8.80E-03
39	GO:0000156: phosphorelay response regulator activity	1.32E-02
40	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.32E-02
41	GO:0005200: structural constituent of cytoskeleton	1.44E-02
42	GO:0008168: methyltransferase activity	1.47E-02
43	GO:0016413: O-acetyltransferase activity	1.50E-02
44	GO:0016788: hydrolase activity, acting on ester bonds	1.56E-02
45	GO:0102483: scopolin beta-glucosidase activity	1.75E-02
46	GO:0008236: serine-type peptidase activity	1.82E-02
47	GO:0015238: drug transmembrane transporter activity	1.95E-02
48	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.09E-02
49	GO:0008422: beta-glucosidase activity	2.37E-02
50	GO:0000149: SNARE binding	2.37E-02
51	GO:0004871: signal transducer activity	2.38E-02
52	GO:0042393: histone binding	2.44E-02
53	GO:0005484: SNAP receptor activity	2.67E-02
54	GO:0005215: transporter activity	3.11E-02
55	GO:0016298: lipase activity	3.38E-02
56	GO:0008234: cysteine-type peptidase activity	3.55E-02
57	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.98E-02
58	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.98E-02
59	GO:0051082: unfolded protein binding	4.24E-02
60	GO:0016757: transferase activity, transferring glycosyl groups	4.33E-02
61	GO:0004386: helicase activity	4.51E-02
62	GO:0016758: transferase activity, transferring hexosyl groups	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	3.42E-05
2	GO:0009654: photosystem II oxygen evolving complex	4.61E-04
3	GO:0009570: chloroplast stroma	6.28E-04
4	GO:0009544: chloroplast ATP synthase complex	8.84E-04
5	GO:0019898: extrinsic component of membrane	9.36E-04
6	GO:0031011: Ino80 complex	1.12E-03
7	GO:0009501: amyloplast	2.22E-03
8	GO:0009534: chloroplast thylakoid	3.20E-03
9	GO:0005770: late endosome	1.04E-02
10	GO:0010319: stromule	1.44E-02
11	GO:0031969: chloroplast membrane	1.90E-02
12	GO:0009941: chloroplast envelope	2.49E-02
13	GO:0031902: late endosome membrane	2.52E-02
14	GO:0031977: thylakoid lumen	2.52E-02
15	GO:0031201: SNARE complex	2.52E-02
16	GO:0010008: endosome membrane	3.80E-02
17	GO:0005834: heterotrimeric G-protein complex	3.89E-02
18	GO:0012505: endomembrane system	4.15E-02
19	GO:0009706: chloroplast inner membrane	4.24E-02
20	GO:0009543: chloroplast thylakoid lumen	4.97E-02