co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G66580

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
2	GO:0061157: mRNA destabilization	0.00E+00
3	GO:0002184: cytoplasmic translational termination	0.00E+00
4	GO:0017038: protein import	0.00E+00
5	GO:0043392: negative regulation of DNA binding	0.00E+00
6	GO:2000469: negative regulation of peroxidase activity	0.00E+00
7	GO:0090706: specification of plant organ position	0.00E+00
8	GO:0090697: post-embryonic plant organ morphogenesis	0.00E+00
9	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
10	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
11	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
12	GO:0042407: cristae formation	0.00E+00
13	GO:0007638: mechanosensory behavior	0.00E+00
14	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
15	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
16	GO:0031222: arabinan catabolic process	0.00E+00
17	GO:0046620: regulation of organ growth	4.39E-08
18	GO:0009734: auxin-activated signaling pathway	5.24E-08
19	GO:0009733: response to auxin	5.31E-08
20	GO:0005983: starch catabolic process	2.93E-05
21	GO:0018026: peptidyl-lysine monomethylation	3.04E-05
22	GO:1900033: negative regulation of trichome patterning	3.04E-05
23	GO:0040008: regulation of growth	5.27E-05
24	GO:0015995: chlorophyll biosynthetic process	1.70E-04
25	GO:0046739: transport of virus in multicellular host	1.97E-04
26	GO:0010182: sugar mediated signaling pathway	3.24E-04
27	GO:0048629: trichome patterning	3.27E-04
28	GO:2000012: regulation of auxin polar transport	5.01E-04
29	GO:0042793: transcription from plastid promoter	6.72E-04
30	GO:0015904: tetracycline transport	8.55E-04
31	GO:2000905: negative regulation of starch metabolic process	8.55E-04
32	GO:0005991: trehalose metabolic process	8.55E-04
33	GO:0010450: inflorescence meristem growth	8.55E-04
34	GO:0000023: maltose metabolic process	8.55E-04
35	GO:0000025: maltose catabolic process	8.55E-04
36	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	8.55E-04
37	GO:0010063: positive regulation of trichoblast fate specification	8.55E-04
38	GO:0010480: microsporocyte differentiation	8.55E-04
39	GO:0005980: glycogen catabolic process	8.55E-04
40	GO:0030198: extracellular matrix organization	8.55E-04
41	GO:0042759: long-chain fatty acid biosynthetic process	8.55E-04
42	GO:0042371: vitamin K biosynthetic process	8.55E-04
43	GO:0043686: co-translational protein modification	8.55E-04
44	GO:0046520: sphingoid biosynthetic process	8.55E-04
45	GO:0043007: maintenance of rDNA	8.55E-04
46	GO:0051247: positive regulation of protein metabolic process	8.55E-04
47	GO:1902458: positive regulation of stomatal opening	8.55E-04
48	GO:0042372: phylloquinone biosynthetic process	8.88E-04
49	GO:0030488: tRNA methylation	8.88E-04
50	GO:0016042: lipid catabolic process	9.59E-04
51	GO:0048437: floral organ development	1.13E-03
52	GO:0030307: positive regulation of cell growth	1.13E-03
53	GO:2000070: regulation of response to water deprivation	1.41E-03
54	GO:0009416: response to light stimulus	1.45E-03
55	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.45E-03
56	GO:0010497: plasmodesmata-mediated intercellular transport	1.72E-03
57	GO:0006568: tryptophan metabolic process	1.85E-03
58	GO:2000123: positive regulation of stomatal complex development	1.85E-03
59	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.85E-03
60	GO:0009629: response to gravity	1.85E-03
61	GO:0019388: galactose catabolic process	1.85E-03
62	GO:1900871: chloroplast mRNA modification	1.85E-03
63	GO:0007154: cell communication	1.85E-03
64	GO:0071497: cellular response to freezing	1.85E-03
65	GO:0090342: regulation of cell aging	1.85E-03
66	GO:0009786: regulation of asymmetric cell division	1.85E-03
67	GO:0031648: protein destabilization	1.85E-03
68	GO:0006423: cysteinyl-tRNA aminoacylation	1.85E-03
69	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.85E-03
70	GO:0000902: cell morphogenesis	2.07E-03
71	GO:0010305: leaf vascular tissue pattern formation	2.18E-03
72	GO:0006631: fatty acid metabolic process	2.30E-03
73	GO:0009638: phototropism	2.45E-03
74	GO:0006779: porphyrin-containing compound biosynthetic process	2.45E-03
75	GO:0009098: leucine biosynthetic process	2.45E-03
76	GO:1900865: chloroplast RNA modification	2.45E-03
77	GO:0009926: auxin polar transport	2.61E-03
78	GO:0006782: protoporphyrinogen IX biosynthetic process	2.87E-03
79	GO:0048829: root cap development	2.87E-03
80	GO:0009641: shade avoidance	2.87E-03
81	GO:0009658: chloroplast organization	2.92E-03
82	GO:0048586: regulation of long-day photoperiodism, flowering	3.07E-03
83	GO:0033591: response to L-ascorbic acid	3.07E-03
84	GO:1902448: positive regulation of shade avoidance	3.07E-03
85	GO:0071398: cellular response to fatty acid	3.07E-03
86	GO:0045165: cell fate commitment	3.07E-03
87	GO:0009773: photosynthetic electron transport in photosystem I	3.33E-03
88	GO:0009725: response to hormone	4.35E-03
89	GO:0010628: positive regulation of gene expression	4.35E-03
90	GO:0010588: cotyledon vascular tissue pattern formation	4.35E-03
91	GO:0006006: glucose metabolic process	4.35E-03
92	GO:0010102: lateral root morphogenesis	4.35E-03
93	GO:0010071: root meristem specification	4.48E-03
94	GO:0007231: osmosensory signaling pathway	4.48E-03
95	GO:0009102: biotin biosynthetic process	4.48E-03
96	GO:0010306: rhamnogalacturonan II biosynthetic process	4.48E-03
97	GO:0010731: protein glutathionylation	4.48E-03
98	GO:0009590: detection of gravity	4.48E-03
99	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	4.48E-03
100	GO:0043572: plastid fission	4.48E-03
101	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	4.48E-03
102	GO:1990019: protein storage vacuole organization	4.48E-03
103	GO:0016556: mRNA modification	4.48E-03
104	GO:0010371: regulation of gibberellin biosynthetic process	4.48E-03
105	GO:0007275: multicellular organism development	4.60E-03
106	GO:0010027: thylakoid membrane organization	4.60E-03
107	GO:0010020: chloroplast fission	4.92E-03
108	GO:0070588: calcium ion transmembrane transport	5.53E-03
109	GO:0042274: ribosomal small subunit biogenesis	6.06E-03
110	GO:0033500: carbohydrate homeostasis	6.06E-03
111	GO:2000038: regulation of stomatal complex development	6.06E-03
112	GO:0009765: photosynthesis, light harvesting	6.06E-03
113	GO:2000306: positive regulation of photomorphogenesis	6.06E-03
114	GO:0022622: root system development	6.06E-03
115	GO:0006221: pyrimidine nucleotide biosynthetic process	6.06E-03
116	GO:0042938: dipeptide transport	6.06E-03
117	GO:0009755: hormone-mediated signaling pathway	6.06E-03
118	GO:1901141: regulation of lignin biosynthetic process	6.06E-03
119	GO:0010109: regulation of photosynthesis	6.06E-03
120	GO:0045892: negative regulation of transcription, DNA-templated	6.59E-03
121	GO:0005992: trehalose biosynthetic process	6.86E-03
122	GO:0009742: brassinosteroid mediated signaling pathway	7.78E-03
123	GO:0016123: xanthophyll biosynthetic process	7.81E-03
124	GO:0010438: cellular response to sulfur starvation	7.81E-03
125	GO:0010158: abaxial cell fate specification	7.81E-03
126	GO:0010375: stomatal complex patterning	7.81E-03
127	GO:0010236: plastoquinone biosynthetic process	7.81E-03
128	GO:0045038: protein import into chloroplast thylakoid membrane	7.81E-03
129	GO:0048497: maintenance of floral organ identity	7.81E-03
130	GO:0016120: carotene biosynthetic process	7.81E-03
131	GO:0031365: N-terminal protein amino acid modification	7.81E-03
132	GO:0045487: gibberellin catabolic process	7.81E-03
133	GO:1902183: regulation of shoot apical meristem development	7.81E-03
134	GO:0009913: epidermal cell differentiation	9.72E-03
135	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	9.72E-03
136	GO:0009959: negative gravitropism	9.72E-03
137	GO:1902456: regulation of stomatal opening	9.72E-03
138	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	9.72E-03
139	GO:0033365: protein localization to organelle	9.72E-03
140	GO:0016554: cytidine to uridine editing	9.72E-03
141	GO:0018258: protein O-linked glycosylation via hydroxyproline	9.72E-03
142	GO:0000741: karyogamy	9.72E-03
143	GO:0010405: arabinogalactan protein metabolic process	9.72E-03
144	GO:0009686: gibberellin biosynthetic process	1.00E-02
145	GO:0010310: regulation of hydrogen peroxide metabolic process	1.18E-02
146	GO:0009082: branched-chain amino acid biosynthetic process	1.18E-02
147	GO:0006458: 'de novo' protein folding	1.18E-02
148	GO:0048280: vesicle fusion with Golgi apparatus	1.18E-02
149	GO:0048509: regulation of meristem development	1.18E-02
150	GO:0009099: valine biosynthetic process	1.18E-02
151	GO:0042026: protein refolding	1.18E-02
152	GO:2000033: regulation of seed dormancy process	1.18E-02
153	GO:0031930: mitochondria-nucleus signaling pathway	1.18E-02
154	GO:0080086: stamen filament development	1.18E-02
155	GO:0009640: photomorphogenesis	1.22E-02
156	GO:0009790: embryo development	1.27E-02
157	GO:0080022: primary root development	1.28E-02
158	GO:0006662: glycerol ether metabolic process	1.38E-02
159	GO:0010197: polar nucleus fusion	1.38E-02
160	GO:0006955: immune response	1.40E-02
161	GO:0009772: photosynthetic electron transport in photosystem II	1.40E-02
162	GO:0010098: suspensor development	1.40E-02
163	GO:0030497: fatty acid elongation	1.40E-02
164	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	1.40E-02
165	GO:0010444: guard mother cell differentiation	1.40E-02
166	GO:0032880: regulation of protein localization	1.40E-02
167	GO:0010161: red light signaling pathway	1.40E-02
168	GO:0009646: response to absence of light	1.49E-02
169	GO:0006855: drug transmembrane transport	1.49E-02
170	GO:0009793: embryo development ending in seed dormancy	1.60E-02
171	GO:0019252: starch biosynthetic process	1.60E-02
172	GO:0006402: mRNA catabolic process	1.63E-02
173	GO:0010439: regulation of glucosinolate biosynthetic process	1.63E-02
174	GO:0006605: protein targeting	1.63E-02
175	GO:0005978: glycogen biosynthetic process	1.63E-02
176	GO:0009704: de-etiolation	1.63E-02
177	GO:0009819: drought recovery	1.63E-02
178	GO:0070413: trehalose metabolism in response to stress	1.63E-02
179	GO:0000105: histidine biosynthetic process	1.63E-02
180	GO:0009451: RNA modification	1.70E-02
181	GO:0006508: proteolysis	1.73E-02
182	GO:0010583: response to cyclopentenone	1.83E-02
183	GO:0032502: developmental process	1.83E-02
184	GO:0010099: regulation of photomorphogenesis	1.88E-02
185	GO:0015996: chlorophyll catabolic process	1.88E-02
186	GO:0009097: isoleucine biosynthetic process	1.88E-02
187	GO:0010100: negative regulation of photomorphogenesis	1.88E-02
188	GO:0006526: arginine biosynthetic process	1.88E-02
189	GO:0007186: G-protein coupled receptor signaling pathway	1.88E-02
190	GO:0032544: plastid translation	1.88E-02
191	GO:0009657: plastid organization	1.88E-02
192	GO:0010093: specification of floral organ identity	1.88E-02
193	GO:0009739: response to gibberellin	1.94E-02
194	GO:0045454: cell redox homeostasis	1.95E-02
195	GO:1901657: glycosyl compound metabolic process	1.96E-02
196	GO:0009909: regulation of flower development	2.03E-02
197	GO:0010252: auxin homeostasis	2.08E-02
198	GO:0009828: plant-type cell wall loosening	2.08E-02
199	GO:0051865: protein autoubiquitination	2.14E-02
200	GO:0046685: response to arsenic-containing substance	2.14E-02
201	GO:0010206: photosystem II repair	2.14E-02
202	GO:2000024: regulation of leaf development	2.14E-02
203	GO:0046916: cellular transition metal ion homeostasis	2.14E-02
204	GO:0006783: heme biosynthetic process	2.14E-02
205	GO:0000373: Group II intron splicing	2.14E-02
206	GO:0048507: meristem development	2.14E-02
207	GO:0048367: shoot system development	2.30E-02
208	GO:0043067: regulation of programmed cell death	2.41E-02
209	GO:0031425: chloroplast RNA processing	2.41E-02
210	GO:0030154: cell differentiation	2.54E-02
211	GO:0009740: gibberellic acid mediated signaling pathway	2.59E-02
212	GO:0009607: response to biotic stimulus	2.64E-02
213	GO:0010029: regulation of seed germination	2.64E-02
214	GO:0009299: mRNA transcription	2.69E-02
215	GO:0010629: negative regulation of gene expression	2.69E-02
216	GO:0010162: seed dormancy process	2.69E-02
217	GO:0006896: Golgi to vacuole transport	2.69E-02
218	GO:0016441: posttranscriptional gene silencing	2.69E-02
219	GO:0010015: root morphogenesis	2.98E-02
220	GO:0000038: very long-chain fatty acid metabolic process	2.98E-02
221	GO:0009073: aromatic amino acid family biosynthetic process	2.98E-02
222	GO:0006816: calcium ion transport	2.98E-02
223	GO:0009682: induced systemic resistance	2.98E-02
224	GO:0048229: gametophyte development	2.98E-02
225	GO:0009817: defense response to fungus, incompatible interaction	3.25E-02
226	GO:0015706: nitrate transport	3.28E-02
227	GO:0012501: programmed cell death	3.28E-02
228	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.28E-02
229	GO:0045037: protein import into chloroplast stroma	3.28E-02
230	GO:0000160: phosphorelay signal transduction system	3.42E-02
231	GO:0009813: flavonoid biosynthetic process	3.42E-02
232	GO:0009767: photosynthetic electron transport chain	3.60E-02
233	GO:2000028: regulation of photoperiodism, flowering	3.60E-02
234	GO:0009785: blue light signaling pathway	3.60E-02
235	GO:0050826: response to freezing	3.60E-02
236	GO:0010075: regulation of meristem growth	3.60E-02
237	GO:0048527: lateral root development	3.76E-02
238	GO:0006351: transcription, DNA-templated	3.91E-02
239	GO:0009934: regulation of meristem structural organization	3.92E-02
240	GO:0010207: photosystem II assembly	3.92E-02
241	GO:0009933: meristem structural organization	3.92E-02
242	GO:0009266: response to temperature stimulus	3.92E-02
243	GO:0006865: amino acid transport	3.94E-02
244	GO:0048366: leaf development	3.98E-02
245	GO:0090351: seedling development	4.25E-02
246	GO:0010030: positive regulation of seed germination	4.25E-02
247	GO:0034599: cellular response to oxidative stress	4.30E-02
248	GO:0019762: glucosinolate catabolic process	4.59E-02
249	GO:0010025: wax biosynthetic process	4.59E-02
250	GO:0000162: tryptophan biosynthetic process	4.59E-02
251	GO:0006071: glycerol metabolic process	4.59E-02
252	GO:0030001: metal ion transport	4.69E-02
253	GO:0006633: fatty acid biosynthetic process	4.88E-02
254	GO:0009944: polarity specification of adaxial/abaxial axis	4.94E-02
255	GO:0080147: root hair cell development	4.94E-02
256	GO:0010187: negative regulation of seed germination	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0005201: extracellular matrix structural constituent	0.00E+00
2	GO:0004076: biotin synthase activity	0.00E+00
3	GO:0071633: dihydroceramidase activity	0.00E+00
4	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
5	GO:0005363: maltose transmembrane transporter activity	0.00E+00
6	GO:0010303: limit dextrinase activity	0.00E+00
7	GO:0047661: amino-acid racemase activity	0.00E+00
8	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
9	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
10	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
11	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
12	GO:0051060: pullulanase activity	0.00E+00
13	GO:0015267: channel activity	0.00E+00
14	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
15	GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity	0.00E+00
16	GO:0005504: fatty acid binding	9.63E-05
17	GO:0045430: chalcone isomerase activity	3.27E-04
18	GO:0016279: protein-lysine N-methyltransferase activity	3.27E-04
19	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	8.55E-04
20	GO:0000170: sphingosine hydroxylase activity	8.55E-04
21	GO:0050139: nicotinate-N-glucosyltransferase activity	8.55E-04
22	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	8.55E-04
23	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	8.55E-04
24	GO:0004425: indole-3-glycerol-phosphate synthase activity	8.55E-04
25	GO:0004134: 4-alpha-glucanotransferase activity	8.55E-04
26	GO:0004645: phosphorylase activity	8.55E-04
27	GO:0009374: biotin binding	8.55E-04
28	GO:0008184: glycogen phosphorylase activity	8.55E-04
29	GO:0019203: carbohydrate phosphatase activity	8.55E-04
30	GO:0042834: peptidoglycan binding	8.55E-04
31	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	8.55E-04
32	GO:0005080: protein kinase C binding	8.55E-04
33	GO:0050308: sugar-phosphatase activity	8.55E-04
34	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	8.55E-04
35	GO:0042586: peptide deformylase activity	8.55E-04
36	GO:0010313: phytochrome binding	8.55E-04
37	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	8.55E-04
38	GO:0016630: protochlorophyllide reductase activity	1.85E-03
39	GO:0004817: cysteine-tRNA ligase activity	1.85E-03
40	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.85E-03
41	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	1.85E-03
42	GO:0004614: phosphoglucomutase activity	1.85E-03
43	GO:0042284: sphingolipid delta-4 desaturase activity	1.85E-03
44	GO:0008493: tetracycline transporter activity	1.85E-03
45	GO:0017118: lipoyltransferase activity	1.85E-03
46	GO:0003852: 2-isopropylmalate synthase activity	1.85E-03
47	GO:0045543: gibberellin 2-beta-dioxygenase activity	1.85E-03
48	GO:0043425: bHLH transcription factor binding	1.85E-03
49	GO:0001085: RNA polymerase II transcription factor binding	2.18E-03
50	GO:0016788: hydrolase activity, acting on ester bonds	3.03E-03
51	GO:0015462: ATPase-coupled protein transmembrane transporter activity	3.07E-03
52	GO:0004180: carboxypeptidase activity	3.07E-03
53	GO:0045174: glutathione dehydrogenase (ascorbate) activity	3.07E-03
54	GO:0003913: DNA photolyase activity	3.07E-03
55	GO:0004148: dihydrolipoyl dehydrogenase activity	3.07E-03
56	GO:0016805: dipeptidase activity	3.07E-03
57	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	3.07E-03
58	GO:0005262: calcium channel activity	4.35E-03
59	GO:0016298: lipase activity	4.36E-03
60	GO:0052655: L-valine transaminase activity	4.48E-03
61	GO:0001872: (1->3)-beta-D-glucan binding	4.48E-03
62	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	4.48E-03
63	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	4.48E-03
64	GO:0052656: L-isoleucine transaminase activity	4.48E-03
65	GO:0009041: uridylate kinase activity	4.48E-03
66	GO:0043023: ribosomal large subunit binding	4.48E-03
67	GO:0052654: L-leucine transaminase activity	4.48E-03
68	GO:0016851: magnesium chelatase activity	4.48E-03
69	GO:0052689: carboxylic ester hydrolase activity	5.46E-03
70	GO:0042936: dipeptide transporter activity	6.06E-03
71	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	6.06E-03
72	GO:0004084: branched-chain-amino-acid transaminase activity	6.06E-03
73	GO:0019199: transmembrane receptor protein kinase activity	6.06E-03
74	GO:0046556: alpha-L-arabinofuranosidase activity	6.06E-03
75	GO:0004659: prenyltransferase activity	6.06E-03
76	GO:0005528: FK506 binding	6.86E-03
77	GO:0015238: drug transmembrane transporter activity	6.91E-03
78	GO:0015035: protein disulfide oxidoreductase activity	7.44E-03
79	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	7.81E-03
80	GO:0003959: NADPH dehydrogenase activity	7.81E-03
81	GO:0003989: acetyl-CoA carboxylase activity	7.81E-03
82	GO:0004176: ATP-dependent peptidase activity	8.36E-03
83	GO:0080030: methyl indole-3-acetate esterase activity	9.72E-03
84	GO:1990714: hydroxyproline O-galactosyltransferase activity	9.72E-03
85	GO:0004709: MAP kinase kinase kinase activity	9.72E-03
86	GO:0004556: alpha-amylase activity	9.72E-03
87	GO:0016208: AMP binding	9.72E-03
88	GO:0003968: RNA-directed 5'-3' RNA polymerase activity	9.72E-03
89	GO:2001070: starch binding	9.72E-03
90	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.01E-02
91	GO:0004519: endonuclease activity	1.14E-02
92	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.18E-02
93	GO:0016832: aldehyde-lyase activity	1.18E-02
94	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.18E-02
95	GO:0047134: protein-disulfide reductase activity	1.18E-02
96	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.22E-02
97	GO:0004791: thioredoxin-disulfide reductase activity	1.49E-02
98	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.49E-02
99	GO:0046983: protein dimerization activity	1.81E-02
100	GO:0046914: transition metal ion binding	1.88E-02
101	GO:0008173: RNA methyltransferase activity	1.88E-02
102	GO:0000156: phosphorelay response regulator activity	1.96E-02
103	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.96E-02
104	GO:0044212: transcription regulatory region DNA binding	2.10E-02
105	GO:0004871: signal transducer activity	2.11E-02
106	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.14E-02
107	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.14E-02
108	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	2.14E-02
109	GO:0005200: structural constituent of cytoskeleton	2.22E-02
110	GO:0008237: metallopeptidase activity	2.22E-02
111	GO:0005215: transporter activity	2.62E-02
112	GO:0015020: glucuronosyltransferase activity	2.69E-02
113	GO:0004805: trehalose-phosphatase activity	2.69E-02
114	GO:0030234: enzyme regulator activity	2.69E-02
115	GO:0016787: hydrolase activity	2.71E-02
116	GO:0102483: scopolin beta-glucosidase activity	2.94E-02
117	GO:0044183: protein binding involved in protein folding	2.98E-02
118	GO:0047372: acylglycerol lipase activity	2.98E-02
119	GO:0008559: xenobiotic-transporting ATPase activity	2.98E-02
120	GO:0009055: electron carrier activity	3.12E-02
121	GO:0000976: transcription regulatory region sequence-specific DNA binding	3.28E-02
122	GO:0003725: double-stranded RNA binding	3.60E-02
123	GO:0015266: protein channel activity	3.60E-02
124	GO:0004089: carbonate dehydratase activity	3.60E-02
125	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.76E-02
126	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.82E-02
127	GO:0008083: growth factor activity	3.92E-02
128	GO:0008266: poly(U) RNA binding	3.92E-02
129	GO:0003712: transcription cofactor activity	4.25E-02
130	GO:0008146: sulfotransferase activity	4.25E-02
131	GO:0004190: aspartic-type endopeptidase activity	4.25E-02
132	GO:0003723: RNA binding	4.32E-02
133	GO:0008422: beta-glucosidase activity	4.49E-02
134	GO:0000149: SNARE binding	4.49E-02
135	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.59E-02
136	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.59E-02
137	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.59E-02
138	GO:0051536: iron-sulfur cluster binding	4.94E-02
139	GO:0031418: L-ascorbic acid binding	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	8.96E-12
2	GO:0009570: chloroplast stroma	1.68E-11
3	GO:0009534: chloroplast thylakoid	7.66E-07
4	GO:0009941: chloroplast envelope	1.00E-05
5	GO:0009508: plastid chromosome	5.01E-04
6	GO:0009543: chloroplast thylakoid lumen	6.38E-04
7	GO:0009295: nucleoid	6.79E-04
8	GO:0009654: photosystem II oxygen evolving complex	1.02E-03
9	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.85E-03
10	GO:0031977: thylakoid lumen	2.30E-03
11	GO:0019898: extrinsic component of membrane	2.62E-03
12	GO:0009528: plastid inner membrane	3.07E-03
13	GO:0019897: extrinsic component of plasma membrane	3.07E-03
14	GO:0010007: magnesium chelatase complex	3.07E-03
15	GO:0030139: endocytic vesicle	3.07E-03
16	GO:0009317: acetyl-CoA carboxylase complex	3.07E-03
17	GO:0010319: stromule	3.96E-03
18	GO:0005886: plasma membrane	3.99E-03
19	GO:0031969: chloroplast membrane	4.48E-03
20	GO:0032585: multivesicular body membrane	4.48E-03
21	GO:0005667: transcription factor complex	5.30E-03
22	GO:0009527: plastid outer membrane	6.06E-03
23	GO:0009544: chloroplast ATP synthase complex	6.06E-03
24	GO:0046658: anchored component of plasma membrane	7.47E-03
25	GO:0031225: anchored component of membrane	1.16E-02
26	GO:0009533: chloroplast stromal thylakoid	1.40E-02
27	GO:0009986: cell surface	1.40E-02
28	GO:0009535: chloroplast thylakoid membrane	1.46E-02
29	GO:0009536: plastid	1.47E-02
30	GO:0009579: thylakoid	1.62E-02
31	GO:0012507: ER to Golgi transport vesicle membrane	1.63E-02
32	GO:0009501: amyloplast	1.63E-02
33	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.14E-02
34	GO:0010494: cytoplasmic stress granule	2.14E-02
35	GO:0030529: intracellular ribonucleoprotein complex	2.49E-02
36	GO:0090404: pollen tube tip	2.98E-02
37	GO:0009707: chloroplast outer membrane	3.25E-02
38	GO:0043231: intracellular membrane-bounded organelle	3.27E-02
39	GO:0005578: proteinaceous extracellular matrix	3.60E-02
40	GO:0030095: chloroplast photosystem II	3.92E-02
41	GO:0031201: SNARE complex	4.88E-02
42	GO:0031902: late endosome membrane	4.88E-02