co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G65700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000023: regulation of lateral root development	0.00E+00
2	GO:0051171: regulation of nitrogen compound metabolic process	1.21E-05
3	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	1.21E-05
4	GO:0010569: regulation of double-strand break repair via homologous recombination	3.21E-05
5	GO:0042780: tRNA 3'-end processing	5.78E-05
6	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	5.78E-05
7	GO:0006013: mannose metabolic process	5.78E-05
8	GO:0010255: glucose mediated signaling pathway	8.79E-05
9	GO:0009616: virus induced gene silencing	1.59E-04
10	GO:0009959: negative gravitropism	1.98E-04
11	GO:0035194: posttranscriptional gene silencing by RNA	1.98E-04
12	GO:0006401: RNA catabolic process	2.82E-04
13	GO:0019745: pentacyclic triterpenoid biosynthetic process	2.82E-04
14	GO:0010380: regulation of chlorophyll biosynthetic process	4.69E-04
15	GO:1903507: negative regulation of nucleic acid-templated transcription	5.71E-04
16	GO:0080188: RNA-directed DNA methylation	7.88E-04
17	GO:0006338: chromatin remodeling	9.02E-04
18	GO:0007010: cytoskeleton organization	9.02E-04
19	GO:0010187: negative regulation of seed germination	9.02E-04
20	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.08E-03
21	GO:0042127: regulation of cell proliferation	1.21E-03
22	GO:0010051: xylem and phloem pattern formation	1.34E-03
23	GO:0080156: mitochondrial mRNA modification	1.61E-03
24	GO:0009639: response to red or far red light	1.83E-03
25	GO:0010027: thylakoid membrane organization	2.06E-03
26	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.14E-03
27	GO:0009832: plant-type cell wall biogenesis	2.55E-03
28	GO:0009910: negative regulation of flower development	2.71E-03
29	GO:0008283: cell proliferation	3.43E-03
30	GO:0031347: regulation of defense response	3.90E-03
31	GO:0009736: cytokinin-activated signaling pathway	4.20E-03
32	GO:0006364: rRNA processing	4.20E-03
33	GO:0048316: seed development	4.81E-03
34	GO:0009740: gibberellic acid mediated signaling pathway	5.13E-03
35	GO:0016569: covalent chromatin modification	5.13E-03
36	GO:0040008: regulation of growth	7.55E-03
37	GO:0007623: circadian rhythm	7.79E-03
38	GO:0009451: RNA modification	7.92E-03
39	GO:0009739: response to gibberellin	8.43E-03
40	GO:0010468: regulation of gene expression	8.82E-03
41	GO:0009658: chloroplast organization	1.06E-02
42	GO:0048366: leaf development	1.19E-02
43	GO:0009793: embryo development ending in seed dormancy	1.21E-02
44	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.26E-02
45	GO:0044550: secondary metabolite biosynthetic process	1.31E-02
46	GO:0045892: negative regulation of transcription, DNA-templated	1.41E-02
47	GO:0006629: lipid metabolic process	1.62E-02
48	GO:0006397: mRNA processing	1.67E-02
49	GO:0048364: root development	1.67E-02
50	GO:0008152: metabolic process	1.74E-02
51	GO:0009416: response to light stimulus	2.44E-02
52	GO:0009555: pollen development	2.44E-02
53	GO:0009611: response to wounding	2.48E-02
54	GO:0055085: transmembrane transport	2.89E-02
55	GO:0071555: cell wall organization	4.04E-02
56	GO:0006468: protein phosphorylation	4.05E-02
57	GO:0030154: cell differentiation	4.29E-02
58	GO:0009733: response to auxin	4.39E-02

Rank	GO Term	Adjusted P value
1	GO:0008859: exoribonuclease II activity	0.00E+00
2	GO:0016871: cycloartenol synthase activity	0.00E+00
3	GO:0042781: 3'-tRNA processing endoribonuclease activity	5.78E-05
4	GO:0004559: alpha-mannosidase activity	2.39E-04
5	GO:0003724: RNA helicase activity	3.73E-04
6	GO:0003678: DNA helicase activity	4.21E-04
7	GO:0015020: glucuronosyltransferase activity	5.20E-04
8	GO:0000175: 3'-5'-exoribonuclease activity	6.76E-04
9	GO:0003714: transcription corepressor activity	9.02E-04
10	GO:0004540: ribonuclease activity	1.02E-03
11	GO:0001085: RNA polymerase II transcription factor binding	1.40E-03
12	GO:0004519: endonuclease activity	1.61E-03
13	GO:0004806: triglyceride lipase activity	2.30E-03
14	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.71E-03
15	GO:0080043: quercetin 3-O-glucosyltransferase activity	5.02E-03
16	GO:0080044: quercetin 7-O-glucosyltransferase activity	5.02E-03
17	GO:0022857: transmembrane transporter activity	5.13E-03
18	GO:0004386: helicase activity	5.67E-03
19	GO:0016758: transferase activity, transferring hexosyl groups	6.12E-03
20	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	6.82E-03
21	GO:0004672: protein kinase activity	7.65E-03
22	GO:0008017: microtubule binding	8.05E-03
23	GO:0008194: UDP-glycosyltransferase activity	8.43E-03
24	GO:0003723: RNA binding	8.48E-03
25	GO:0003682: chromatin binding	1.10E-02
26	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.48E-02
27	GO:0005524: ATP binding	1.88E-02
28	GO:0016887: ATPase activity	2.22E-02
29	GO:0030246: carbohydrate binding	3.02E-02
30	GO:0019825: oxygen binding	3.14E-02
31	GO:0008270: zinc ion binding	3.74E-02
32	GO:0005509: calcium ion binding	3.81E-02
33	GO:0005506: iron ion binding	3.99E-02
34	GO:0044212: transcription regulatory region DNA binding	4.04E-02
35	GO:0003824: catalytic activity	4.32E-02
36	GO:0005215: transporter activity	4.34E-02

Rank	GO Term	Adjusted P value
1	GO:0000178: exosome (RNase complex)	1.59E-04
2	GO:0005655: nucleolar ribonuclease P complex	2.39E-04
3	GO:0010005: cortical microtubule, transverse to long axis	2.39E-04
4	GO:0043231: intracellular membrane-bounded organelle	1.63E-03
5	GO:0000932: P-body	2.06E-03
6	GO:0005667: transcription factor complex	2.22E-03
7	GO:0005819: spindle	3.06E-03
8	GO:0009524: phragmoplast	6.47E-03
9	GO:0005773: vacuole	2.78E-02
10	GO:0009505: plant-type cell wall	4.74E-02