co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G65495

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051553: flavone biosynthetic process	0.00E+00
2	GO:1904250: positive regulation of age-related resistance	0.00E+00
3	GO:0071985: multivesicular body sorting pathway	0.00E+00
4	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
5	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
6	GO:0005993: trehalose catabolic process	0.00E+00
7	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
8	GO:0090400: stress-induced premature senescence	0.00E+00
9	GO:0080149: sucrose induced translational repression	0.00E+00
10	GO:0010407: non-classical arabinogalactan protein metabolic process	0.00E+00
11	GO:1902009: positive regulation of toxin transport	0.00E+00
12	GO:0016192: vesicle-mediated transport	5.43E-06
13	GO:0016559: peroxisome fission	6.94E-05
14	GO:0015709: thiosulfate transport	2.65E-04
15	GO:0071422: succinate transmembrane transport	2.65E-04
16	GO:0042853: L-alanine catabolic process	2.65E-04
17	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	2.65E-04
18	GO:0007033: vacuole organization	3.08E-04
19	GO:0000162: tryptophan biosynthetic process	3.44E-04
20	GO:0030150: protein import into mitochondrial matrix	3.83E-04
21	GO:0044375: regulation of peroxisome size	4.38E-04
22	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	4.38E-04
23	GO:0015031: protein transport	5.38E-04
24	GO:0055070: copper ion homeostasis	6.29E-04
25	GO:0001676: long-chain fatty acid metabolic process	6.29E-04
26	GO:0015729: oxaloacetate transport	6.29E-04
27	GO:0002239: response to oomycetes	6.29E-04
28	GO:0006511: ubiquitin-dependent protein catabolic process	7.25E-04
29	GO:1902584: positive regulation of response to water deprivation	8.35E-04
30	GO:0006621: protein retention in ER lumen	8.35E-04
31	GO:0006623: protein targeting to vacuole	8.60E-04
32	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.05E-03
33	GO:0045927: positive regulation of growth	1.05E-03
34	GO:0071423: malate transmembrane transport	1.05E-03
35	GO:0007275: multicellular organism development	1.27E-03
36	GO:0006014: D-ribose metabolic process	1.29E-03
37	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	1.29E-03
38	GO:0035435: phosphate ion transmembrane transport	1.29E-03
39	GO:1900425: negative regulation of defense response to bacterium	1.29E-03
40	GO:0080113: regulation of seed growth	1.54E-03
41	GO:0034389: lipid particle organization	1.54E-03
42	GO:0017148: negative regulation of translation	1.54E-03
43	GO:1902074: response to salt	1.81E-03
44	GO:0080186: developmental vegetative growth	1.81E-03
45	GO:0008272: sulfate transport	1.81E-03
46	GO:1900057: positive regulation of leaf senescence	1.81E-03
47	GO:0006333: chromatin assembly or disassembly	1.81E-03
48	GO:0045010: actin nucleation	2.09E-03
49	GO:0006102: isocitrate metabolic process	2.09E-03
50	GO:0007155: cell adhesion	2.09E-03
51	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.09E-03
52	GO:0043068: positive regulation of programmed cell death	2.09E-03
53	GO:0006002: fructose 6-phosphate metabolic process	2.39E-03
54	GO:0006631: fatty acid metabolic process	2.52E-03
55	GO:0000902: cell morphogenesis	2.70E-03
56	GO:0009835: fruit ripening	2.70E-03
57	GO:0090332: stomatal closure	3.02E-03
58	GO:0009688: abscisic acid biosynthetic process	3.36E-03
59	GO:0000103: sulfate assimilation	3.36E-03
60	GO:0051603: proteolysis involved in cellular protein catabolic process	3.80E-03
61	GO:0000266: mitochondrial fission	4.06E-03
62	GO:0045037: protein import into chloroplast stroma	4.06E-03
63	GO:0055046: microgametogenesis	4.43E-03
64	GO:2000012: regulation of auxin polar transport	4.43E-03
65	GO:0009620: response to fungus	4.76E-03
66	GO:0002237: response to molecule of bacterial origin	4.81E-03
67	GO:0007015: actin filament organization	4.81E-03
68	GO:0090351: seedling development	5.21E-03
69	GO:0010053: root epidermal cell differentiation	5.21E-03
70	GO:0007031: peroxisome organization	5.21E-03
71	GO:0007030: Golgi organization	5.21E-03
72	GO:0009825: multidimensional cell growth	5.21E-03
73	GO:0006289: nucleotide-excision repair	6.03E-03
74	GO:0006334: nucleosome assembly	6.89E-03
75	GO:0019915: lipid storage	6.89E-03
76	GO:0031348: negative regulation of defense response	7.34E-03
77	GO:0009411: response to UV	7.79E-03
78	GO:0010584: pollen exine formation	8.26E-03
79	GO:0009561: megagametogenesis	8.26E-03
80	GO:0009306: protein secretion	8.26E-03
81	GO:0010150: leaf senescence	9.00E-03
82	GO:0010118: stomatal movement	9.23E-03
83	GO:0010182: sugar mediated signaling pathway	9.73E-03
84	GO:0006662: glycerol ether metabolic process	9.73E-03
85	GO:0019252: starch biosynthetic process	1.08E-02
86	GO:0002229: defense response to oomycetes	1.13E-02
87	GO:0010193: response to ozone	1.13E-02
88	GO:0030163: protein catabolic process	1.24E-02
89	GO:0019760: glucosinolate metabolic process	1.29E-02
90	GO:0016579: protein deubiquitination	1.40E-02
91	GO:0001666: response to hypoxia	1.46E-02
92	GO:0010029: regulation of seed germination	1.52E-02
93	GO:0009816: defense response to bacterium, incompatible interaction	1.52E-02
94	GO:0006906: vesicle fusion	1.58E-02
95	GO:0006888: ER to Golgi vesicle-mediated transport	1.64E-02
96	GO:0048767: root hair elongation	1.83E-02
97	GO:0009813: flavonoid biosynthetic process	1.83E-02
98	GO:0006499: N-terminal protein myristoylation	1.89E-02
99	GO:0010043: response to zinc ion	1.96E-02
100	GO:0048527: lateral root development	1.96E-02
101	GO:0000724: double-strand break repair via homologous recombination	2.02E-02
102	GO:0006886: intracellular protein transport	2.14E-02
103	GO:0006099: tricarboxylic acid cycle	2.16E-02
104	GO:0034599: cellular response to oxidative stress	2.16E-02
105	GO:0006839: mitochondrial transport	2.29E-02
106	GO:0006887: exocytosis	2.36E-02
107	GO:0042542: response to hydrogen peroxide	2.43E-02
108	GO:0006979: response to oxidative stress	2.48E-02
109	GO:0010114: response to red light	2.50E-02
110	GO:0009744: response to sucrose	2.50E-02
111	GO:0000209: protein polyubiquitination	2.57E-02
112	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.87E-02
113	GO:0009809: lignin biosynthetic process	3.09E-02
114	GO:0006486: protein glycosylation	3.09E-02
115	GO:0010224: response to UV-B	3.17E-02
116	GO:0006096: glycolytic process	3.49E-02
117	GO:0009734: auxin-activated signaling pathway	3.61E-02
118	GO:0009651: response to salt stress	3.72E-02
119	GO:0016569: covalent chromatin modification	3.81E-02
120	GO:0051726: regulation of cell cycle	4.14E-02
121	GO:0009058: biosynthetic process	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0034338: short-chain carboxylesterase activity	0.00E+00
2	GO:0033759: flavone synthase activity	0.00E+00
3	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
4	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
5	GO:0102867: molybdenum cofactor sulfurtransferase activity	0.00E+00
6	GO:0005046: KDEL sequence binding	0.00E+00
7	GO:0061133: endopeptidase activator activity	0.00E+00
8	GO:0008320: protein transmembrane transporter activity	5.34E-05
9	GO:0016920: pyroglutamyl-peptidase activity	1.14E-04
10	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.14E-04
11	GO:0015927: trehalase activity	1.14E-04
12	GO:0032266: phosphatidylinositol-3-phosphate binding	1.14E-04
13	GO:0009000: selenocysteine lyase activity	1.14E-04
14	GO:0000774: adenyl-nucleotide exchange factor activity	2.65E-04
15	GO:0015117: thiosulfate transmembrane transporter activity	2.65E-04
16	GO:0048531: beta-1,3-galactosyltransferase activity	2.65E-04
17	GO:1901677: phosphate transmembrane transporter activity	2.65E-04
18	GO:0043130: ubiquitin binding	3.83E-04
19	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	4.38E-04
20	GO:0005310: dicarboxylic acid transmembrane transporter activity	4.38E-04
21	GO:0015141: succinate transmembrane transporter activity	4.38E-04
22	GO:0017077: oxidative phosphorylation uncoupler activity	6.29E-04
23	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	6.29E-04
24	GO:0004449: isocitrate dehydrogenase (NAD+) activity	6.29E-04
25	GO:0015131: oxaloacetate transmembrane transporter activity	6.29E-04
26	GO:0030527: structural constituent of chromatin	6.29E-04
27	GO:0016656: monodehydroascorbate reductase (NADH) activity	6.29E-04
28	GO:0004834: tryptophan synthase activity	8.35E-04
29	GO:0046923: ER retention sequence binding	8.35E-04
30	GO:0070628: proteasome binding	8.35E-04
31	GO:0030170: pyridoxal phosphate binding	9.96E-04
32	GO:0030151: molybdenum ion binding	1.05E-03
33	GO:0004623: phospholipase A2 activity	1.05E-03
34	GO:0102391: decanoate--CoA ligase activity	1.54E-03
35	GO:0004747: ribokinase activity	1.54E-03
36	GO:0004656: procollagen-proline 4-dioxygenase activity	1.54E-03
37	GO:0004467: long-chain fatty acid-CoA ligase activity	1.81E-03
38	GO:0003872: 6-phosphofructokinase activity	1.81E-03
39	GO:0015140: malate transmembrane transporter activity	1.81E-03
40	GO:0008865: fructokinase activity	2.09E-03
41	GO:0052747: sinapyl alcohol dehydrogenase activity	2.09E-03
42	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.13E-03
43	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	2.70E-03
44	GO:0042803: protein homodimerization activity	3.95E-03
45	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.06E-03
46	GO:0015116: sulfate transmembrane transporter activity	4.06E-03
47	GO:0008378: galactosyltransferase activity	4.06E-03
48	GO:0031072: heat shock protein binding	4.43E-03
49	GO:0004175: endopeptidase activity	4.81E-03
50	GO:0051082: unfolded protein binding	5.21E-03
51	GO:0003712: transcription cofactor activity	5.21E-03
52	GO:0004725: protein tyrosine phosphatase activity	5.61E-03
53	GO:0051536: iron-sulfur cluster binding	6.03E-03
54	GO:0031418: L-ascorbic acid binding	6.03E-03
55	GO:0051087: chaperone binding	6.45E-03
56	GO:0008408: 3'-5' exonuclease activity	6.89E-03
57	GO:0004298: threonine-type endopeptidase activity	6.89E-03
58	GO:0016887: ATPase activity	8.46E-03
59	GO:0047134: protein-disulfide reductase activity	8.74E-03
60	GO:0005102: receptor binding	8.74E-03
61	GO:0004527: exonuclease activity	9.73E-03
62	GO:0004791: thioredoxin-disulfide reductase activity	1.02E-02
63	GO:0004872: receptor activity	1.08E-02
64	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.13E-02
65	GO:0004197: cysteine-type endopeptidase activity	1.18E-02
66	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.24E-02
67	GO:0003682: chromatin binding	1.48E-02
68	GO:0005507: copper ion binding	1.57E-02
69	GO:0004806: triglyceride lipase activity	1.64E-02
70	GO:0030247: polysaccharide binding	1.64E-02
71	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.77E-02
72	GO:0003746: translation elongation factor activity	2.09E-02
73	GO:0000149: SNARE binding	2.22E-02
74	GO:0042393: histone binding	2.29E-02
75	GO:0005484: SNAP receptor activity	2.50E-02
76	GO:0005198: structural molecule activity	2.72E-02
77	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.57E-02
78	GO:0022857: transmembrane transporter activity	3.81E-02
79	GO:0015035: protein disulfide oxidoreductase activity	4.06E-02
80	GO:0016758: transferase activity, transferring hexosyl groups	4.58E-02
81	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.75E-02
82	GO:0016829: lyase activity	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0005801: cis-Golgi network	3.95E-05
2	GO:0031901: early endosome membrane	1.08E-04
3	GO:0001405: presequence translocase-associated import motor	1.14E-04
4	GO:0008541: proteasome regulatory particle, lid subcomplex	1.82E-04
5	GO:0000814: ESCRT II complex	2.65E-04
6	GO:0030134: ER to Golgi transport vesicle	2.65E-04
7	GO:0000502: proteasome complex	4.24E-04
8	GO:0005744: mitochondrial inner membrane presequence translocase complex	5.99E-04
9	GO:0005789: endoplasmic reticulum membrane	7.77E-04
10	GO:0005945: 6-phosphofructokinase complex	1.05E-03
11	GO:0005778: peroxisomal membrane	1.17E-03
12	GO:0005885: Arp2/3 protein complex	1.54E-03
13	GO:0030173: integral component of Golgi membrane	1.54E-03
14	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	1.81E-03
15	GO:0005737: cytoplasm	2.29E-03
16	GO:0005779: integral component of peroxisomal membrane	2.39E-03
17	GO:0005811: lipid particle	2.39E-03
18	GO:0031902: late endosome membrane	2.52E-03
19	GO:0030665: clathrin-coated vesicle membrane	3.02E-03
20	GO:0008540: proteasome regulatory particle, base subcomplex	3.02E-03
21	GO:0017119: Golgi transport complex	3.36E-03
22	GO:0005743: mitochondrial inner membrane	4.43E-03
23	GO:0005769: early endosome	5.61E-03
24	GO:0005829: cytosol	6.40E-03
25	GO:0005839: proteasome core complex	6.89E-03
26	GO:0005741: mitochondrial outer membrane	6.89E-03
27	GO:0000139: Golgi membrane	9.67E-03
28	GO:0005770: late endosome	9.73E-03
29	GO:0019898: extrinsic component of membrane	1.08E-02
30	GO:0016592: mediator complex	1.18E-02
31	GO:0000785: chromatin	1.18E-02
32	GO:0005777: peroxisome	1.20E-02
33	GO:0032580: Golgi cisterna membrane	1.29E-02
34	GO:0005794: Golgi apparatus	1.61E-02
35	GO:0016021: integral component of membrane	1.64E-02
36	GO:0005768: endosome	2.15E-02
37	GO:0031201: SNARE complex	2.36E-02
38	GO:0009543: chloroplast thylakoid lumen	4.67E-02
39	GO:0005623: cell	4.75E-02