Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G65480

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000469: negative regulation of peroxidase activity0.00E+00
2GO:0090706: specification of plant organ position0.00E+00
3GO:0007037: vacuolar phosphate transport0.00E+00
4GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
5GO:1905177: tracheary element differentiation0.00E+00
6GO:2000905: negative regulation of starch metabolic process5.79E-05
7GO:0010450: inflorescence meristem growth5.79E-05
8GO:0000305: response to oxygen radical5.79E-05
9GO:0006419: alanyl-tRNA aminoacylation5.79E-05
10GO:0043266: regulation of potassium ion transport5.79E-05
11GO:2000021: regulation of ion homeostasis5.79E-05
12GO:0051247: positive regulation of protein metabolic process5.79E-05
13GO:0048255: mRNA stabilization1.41E-04
14GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole1.41E-04
15GO:0048586: regulation of long-day photoperiodism, flowering2.40E-04
16GO:0010623: programmed cell death involved in cell development2.40E-04
17GO:0090153: regulation of sphingolipid biosynthetic process2.40E-04
18GO:2001295: malonyl-CoA biosynthetic process2.40E-04
19GO:0045165: cell fate commitment2.40E-04
20GO:0051513: regulation of monopolar cell growth3.49E-04
21GO:2000306: positive regulation of photomorphogenesis4.66E-04
22GO:0010508: positive regulation of autophagy4.66E-04
23GO:0008295: spermidine biosynthetic process4.66E-04
24GO:0006749: glutathione metabolic process4.66E-04
25GO:0010158: abaxial cell fate specification5.92E-04
26GO:0045038: protein import into chloroplast thylakoid membrane5.92E-04
27GO:1902183: regulation of shoot apical meristem development5.92E-04
28GO:0006555: methionine metabolic process7.24E-04
29GO:0045962: positive regulation of development, heterochronic7.24E-04
30GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione7.24E-04
31GO:0010189: vitamin E biosynthetic process8.63E-04
32GO:0006955: immune response1.01E-03
33GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.01E-03
34GO:0006400: tRNA modification1.01E-03
35GO:0030307: positive regulation of cell growth1.01E-03
36GO:0010093: specification of floral organ identity1.32E-03
37GO:0006098: pentose-phosphate shunt1.48E-03
38GO:2000024: regulation of leaf development1.48E-03
39GO:0000373: Group II intron splicing1.48E-03
40GO:0035999: tetrahydrofolate interconversion1.65E-03
41GO:0009086: methionine biosynthetic process1.65E-03
42GO:0006096: glycolytic process1.79E-03
43GO:0006094: gluconeogenesis2.41E-03
44GO:0009933: meristem structural organization2.62E-03
45GO:0005975: carbohydrate metabolic process2.89E-03
46GO:0009944: polarity specification of adaxial/abaxial axis3.26E-03
47GO:0010431: seed maturation3.72E-03
48GO:0031408: oxylipin biosynthetic process3.72E-03
49GO:0016998: cell wall macromolecule catabolic process3.72E-03
50GO:0030245: cellulose catabolic process3.95E-03
51GO:0006730: one-carbon metabolic process3.95E-03
52GO:0010089: xylem development4.44E-03
53GO:0045489: pectin biosynthetic process5.21E-03
54GO:0010154: fruit development5.21E-03
55GO:0048868: pollen tube development5.21E-03
56GO:0009646: response to absence of light5.48E-03
57GO:0048544: recognition of pollen5.48E-03
58GO:0008654: phospholipid biosynthetic process5.75E-03
59GO:0010583: response to cyclopentenone6.31E-03
60GO:0048366: leaf development6.66E-03
61GO:0010252: auxin homeostasis6.88E-03
62GO:0001666: response to hypoxia7.78E-03
63GO:0071555: cell wall organization7.80E-03
64GO:0010029: regulation of seed germination8.08E-03
65GO:0048527: lateral root development1.04E-02
66GO:0006629: lipid metabolic process1.04E-02
67GO:0051707: response to other organism1.32E-02
68GO:0042546: cell wall biogenesis1.36E-02
69GO:0046686: response to cadmium ion1.37E-02
70GO:0009644: response to high light intensity1.40E-02
71GO:0009965: leaf morphogenesis1.44E-02
72GO:0042538: hyperosmotic salinity response1.55E-02
73GO:0006364: rRNA processing1.63E-02
74GO:0009909: regulation of flower development1.75E-02
75GO:0048316: seed development1.88E-02
76GO:0009740: gibberellic acid mediated signaling pathway2.01E-02
77GO:0006952: defense response2.05E-02
78GO:0006633: fatty acid biosynthetic process2.89E-02
79GO:0006413: translational initiation2.94E-02
80GO:0010150: leaf senescence3.09E-02
81GO:0009451: RNA modification3.15E-02
82GO:0009739: response to gibberellin3.35E-02
83GO:0006470: protein dephosphorylation3.40E-02
84GO:0007166: cell surface receptor signaling pathway3.40E-02
85GO:0010468: regulation of gene expression3.51E-02
86GO:0042254: ribosome biogenesis4.28E-02
87GO:0009723: response to ethylene4.68E-02
RankGO TermAdjusted P value
1GO:0010276: phytol kinase activity0.00E+00
2GO:0042834: peptidoglycan binding5.79E-05
3GO:0004813: alanine-tRNA ligase activity5.79E-05
4GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity5.79E-05
5GO:0008158: hedgehog receptor activity5.79E-05
6GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.06E-04
7GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.23E-04
8GO:0004766: spermidine synthase activity1.41E-04
9GO:0003988: acetyl-CoA C-acyltransferase activity1.41E-04
10GO:0048531: beta-1,3-galactosyltransferase activity1.41E-04
11GO:0004362: glutathione-disulfide reductase activity1.41E-04
12GO:0003989: acetyl-CoA carboxylase activity5.92E-04
13GO:0004605: phosphatidate cytidylyltransferase activity7.24E-04
14GO:0004332: fructose-bisphosphate aldolase activity7.24E-04
15GO:0004462: lactoylglutathione lyase activity7.24E-04
16GO:0043022: ribosome binding1.16E-03
17GO:0004743: pyruvate kinase activity1.65E-03
18GO:0030955: potassium ion binding1.65E-03
19GO:0000049: tRNA binding2.21E-03
20GO:0000976: transcription regulatory region sequence-specific DNA binding2.21E-03
21GO:0008081: phosphoric diester hydrolase activity2.41E-03
22GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.43E-03
23GO:0008810: cellulase activity4.20E-03
24GO:0019901: protein kinase binding5.75E-03
25GO:0016597: amino acid binding7.47E-03
26GO:0004721: phosphoprotein phosphatase activity8.71E-03
27GO:0050661: NADP binding1.21E-02
28GO:0003690: double-stranded DNA binding1.67E-02
29GO:0031625: ubiquitin protein ligase binding1.75E-02
30GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.88E-02
31GO:0030246: carbohydrate binding2.49E-02
32GO:0003743: translation initiation factor activity3.46E-02
33GO:0042802: identical protein binding3.67E-02
34GO:0046982: protein heterodimerization activity4.17E-02
35GO:0000287: magnesium ion binding4.17E-02
36GO:0050660: flavin adenine dinucleotide binding4.68E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast2.44E-05
2GO:0046658: anchored component of plasma membrane5.55E-05
3GO:0080085: signal recognition particle, chloroplast targeting1.41E-04
4GO:0009317: acetyl-CoA carboxylase complex2.40E-04
5GO:0009570: chloroplast stroma6.13E-04
6GO:0031225: anchored component of membrane1.04E-03
7GO:0005786: signal recognition particle, endoplasmic reticulum targeting1.32E-03
8GO:0005578: proteinaceous extracellular matrix2.41E-03
9GO:0009705: plant-type vacuole membrane3.68E-03
10GO:0005773: vacuole5.43E-03
11GO:0000151: ubiquitin ligase complex9.36E-03
12GO:0009505: plant-type cell wall1.04E-02
13GO:0009706: chloroplast inner membrane2.10E-02
14GO:0005623: cell2.51E-02
15GO:0005774: vacuolar membrane3.73E-02
16GO:0005840: ribosome3.91E-02
17GO:0031969: chloroplast membrane4.92E-02
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Gene type



Gene DE type