GO Enrichment Analysis of Co-expressed Genes with
AT5G65460
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 2 | GO:0006664: glycolipid metabolic process | 0.00E+00 |
| 3 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 4 | GO:0035987: endodermal cell differentiation | 1.04E-04 |
| 5 | GO:0090548: response to nitrate starvation | 1.04E-04 |
| 6 | GO:0034757: negative regulation of iron ion transport | 1.04E-04 |
| 7 | GO:0042659: regulation of cell fate specification | 1.04E-04 |
| 8 | GO:0090558: plant epidermis development | 1.04E-04 |
| 9 | GO:1902025: nitrate import | 1.04E-04 |
| 10 | GO:1900871: chloroplast mRNA modification | 2.44E-04 |
| 11 | GO:0010271: regulation of chlorophyll catabolic process | 2.44E-04 |
| 12 | GO:0006432: phenylalanyl-tRNA aminoacylation | 2.44E-04 |
| 13 | GO:0080009: mRNA methylation | 2.44E-04 |
| 14 | GO:0006420: arginyl-tRNA aminoacylation | 2.44E-04 |
| 15 | GO:0080117: secondary growth | 4.05E-04 |
| 16 | GO:0030029: actin filament-based process | 4.05E-04 |
| 17 | GO:0090708: specification of plant organ axis polarity | 4.05E-04 |
| 18 | GO:0009800: cinnamic acid biosynthetic process | 5.82E-04 |
| 19 | GO:0010239: chloroplast mRNA processing | 5.82E-04 |
| 20 | GO:0030104: water homeostasis | 7.73E-04 |
| 21 | GO:0006021: inositol biosynthetic process | 7.73E-04 |
| 22 | GO:0008295: spermidine biosynthetic process | 7.73E-04 |
| 23 | GO:0016123: xanthophyll biosynthetic process | 9.77E-04 |
| 24 | GO:0010438: cellular response to sulfur starvation | 9.77E-04 |
| 25 | GO:0048831: regulation of shoot system development | 1.19E-03 |
| 26 | GO:0009759: indole glucosinolate biosynthetic process | 1.19E-03 |
| 27 | GO:0016554: cytidine to uridine editing | 1.19E-03 |
| 28 | GO:0006559: L-phenylalanine catabolic process | 1.19E-03 |
| 29 | GO:0048509: regulation of meristem development | 1.43E-03 |
| 30 | GO:2000067: regulation of root morphogenesis | 1.43E-03 |
| 31 | GO:0016311: dephosphorylation | 1.43E-03 |
| 32 | GO:0055075: potassium ion homeostasis | 1.93E-03 |
| 33 | GO:0000105: histidine biosynthetic process | 1.93E-03 |
| 34 | GO:0032544: plastid translation | 2.21E-03 |
| 35 | GO:0071482: cellular response to light stimulus | 2.21E-03 |
| 36 | GO:0009827: plant-type cell wall modification | 2.21E-03 |
| 37 | GO:0000373: Group II intron splicing | 2.49E-03 |
| 38 | GO:0009636: response to toxic substance | 2.73E-03 |
| 39 | GO:2000280: regulation of root development | 2.79E-03 |
| 40 | GO:0016571: histone methylation | 2.79E-03 |
| 41 | GO:0016573: histone acetylation | 2.79E-03 |
| 42 | GO:0009098: leucine biosynthetic process | 2.79E-03 |
| 43 | GO:0010018: far-red light signaling pathway | 2.79E-03 |
| 44 | GO:1900865: chloroplast RNA modification | 2.79E-03 |
| 45 | GO:0031627: telomeric loop formation | 3.10E-03 |
| 46 | GO:0006790: sulfur compound metabolic process | 3.75E-03 |
| 47 | GO:0002213: defense response to insect | 3.75E-03 |
| 48 | GO:0009691: cytokinin biosynthetic process | 4.09E-03 |
| 49 | GO:0009266: response to temperature stimulus | 4.44E-03 |
| 50 | GO:0046854: phosphatidylinositol phosphorylation | 4.80E-03 |
| 51 | GO:0042753: positive regulation of circadian rhythm | 5.18E-03 |
| 52 | GO:0006833: water transport | 5.18E-03 |
| 53 | GO:0000162: tryptophan biosynthetic process | 5.18E-03 |
| 54 | GO:0005992: trehalose biosynthetic process | 5.56E-03 |
| 55 | GO:0030150: protein import into mitochondrial matrix | 5.56E-03 |
| 56 | GO:0006338: chromatin remodeling | 5.56E-03 |
| 57 | GO:0051302: regulation of cell division | 5.95E-03 |
| 58 | GO:0071215: cellular response to abscisic acid stimulus | 7.18E-03 |
| 59 | GO:0070417: cellular response to cold | 8.05E-03 |
| 60 | GO:0016117: carotenoid biosynthetic process | 8.05E-03 |
| 61 | GO:0009409: response to cold | 8.07E-03 |
| 62 | GO:0008033: tRNA processing | 8.49E-03 |
| 63 | GO:0010087: phloem or xylem histogenesis | 8.49E-03 |
| 64 | GO:0009958: positive gravitropism | 8.95E-03 |
| 65 | GO:0045489: pectin biosynthetic process | 8.95E-03 |
| 66 | GO:0007018: microtubule-based movement | 9.42E-03 |
| 67 | GO:0005975: carbohydrate metabolic process | 9.59E-03 |
| 68 | GO:0010583: response to cyclopentenone | 1.09E-02 |
| 69 | GO:0007264: small GTPase mediated signal transduction | 1.09E-02 |
| 70 | GO:0009639: response to red or far red light | 1.19E-02 |
| 71 | GO:0051607: defense response to virus | 1.29E-02 |
| 72 | GO:0006970: response to osmotic stress | 1.34E-02 |
| 73 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.40E-02 |
| 74 | GO:0010029: regulation of seed germination | 1.40E-02 |
| 75 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.59E-02 |
| 76 | GO:0030244: cellulose biosynthetic process | 1.62E-02 |
| 77 | GO:0000160: phosphorelay signal transduction system | 1.68E-02 |
| 78 | GO:0009834: plant-type secondary cell wall biogenesis | 1.74E-02 |
| 79 | GO:0009910: negative regulation of flower development | 1.80E-02 |
| 80 | GO:0009793: embryo development ending in seed dormancy | 1.81E-02 |
| 81 | GO:0008283: cell proliferation | 2.30E-02 |
| 82 | GO:0051707: response to other organism | 2.30E-02 |
| 83 | GO:0009965: leaf morphogenesis | 2.50E-02 |
| 84 | GO:0009736: cytokinin-activated signaling pathway | 2.84E-02 |
| 85 | GO:0006364: rRNA processing | 2.84E-02 |
| 86 | GO:0009585: red, far-red light phototransduction | 2.84E-02 |
| 87 | GO:0009909: regulation of flower development | 3.06E-02 |
| 88 | GO:0048316: seed development | 3.28E-02 |
| 89 | GO:0016569: covalent chromatin modification | 3.50E-02 |
| 90 | GO:0009416: response to light stimulus | 4.03E-02 |
| 91 | GO:0009611: response to wounding | 4.12E-02 |
| 92 | GO:0009845: seed germination | 4.54E-02 |
| 93 | GO:0045893: positive regulation of transcription, DNA-templated | 4.62E-02 |
| 94 | GO:0009790: embryo development | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052834: inositol monophosphate phosphatase activity | 0.00E+00 |
| 2 | GO:0004401: histidinol-phosphatase activity | 0.00E+00 |
| 3 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.04E-04 |
| 4 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.04E-04 |
| 5 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.04E-04 |
| 6 | GO:0052381: tRNA dimethylallyltransferase activity | 1.04E-04 |
| 7 | GO:0004103: choline kinase activity | 2.44E-04 |
| 8 | GO:0003852: 2-isopropylmalate synthase activity | 2.44E-04 |
| 9 | GO:0004814: arginine-tRNA ligase activity | 2.44E-04 |
| 10 | GO:0004766: spermidine synthase activity | 2.44E-04 |
| 11 | GO:0052832: inositol monophosphate 3-phosphatase activity | 2.44E-04 |
| 12 | GO:0008934: inositol monophosphate 1-phosphatase activity | 2.44E-04 |
| 13 | GO:0052833: inositol monophosphate 4-phosphatase activity | 2.44E-04 |
| 14 | GO:0004826: phenylalanine-tRNA ligase activity | 2.44E-04 |
| 15 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 2.44E-04 |
| 16 | GO:0050736: O-malonyltransferase activity | 2.44E-04 |
| 17 | GO:0009884: cytokinin receptor activity | 2.44E-04 |
| 18 | GO:0031418: L-ascorbic acid binding | 3.40E-04 |
| 19 | GO:0005034: osmosensor activity | 4.05E-04 |
| 20 | GO:0045548: phenylalanine ammonia-lyase activity | 4.05E-04 |
| 21 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.05E-04 |
| 22 | GO:0046527: glucosyltransferase activity | 7.73E-04 |
| 23 | GO:0042277: peptide binding | 7.73E-04 |
| 24 | GO:0005471: ATP:ADP antiporter activity | 9.77E-04 |
| 25 | GO:0051117: ATPase binding | 1.19E-03 |
| 26 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.43E-03 |
| 27 | GO:0019900: kinase binding | 1.43E-03 |
| 28 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.43E-03 |
| 29 | GO:0003723: RNA binding | 1.73E-03 |
| 30 | GO:0003993: acid phosphatase activity | 1.98E-03 |
| 31 | GO:0045309: protein phosphorylated amino acid binding | 2.79E-03 |
| 32 | GO:0004673: protein histidine kinase activity | 3.10E-03 |
| 33 | GO:0004805: trehalose-phosphatase activity | 3.10E-03 |
| 34 | GO:0003690: double-stranded DNA binding | 3.38E-03 |
| 35 | GO:0019904: protein domain specific binding | 3.42E-03 |
| 36 | GO:0003691: double-stranded telomeric DNA binding | 3.42E-03 |
| 37 | GO:0000049: tRNA binding | 3.75E-03 |
| 38 | GO:0000155: phosphorelay sensor kinase activity | 4.09E-03 |
| 39 | GO:0009982: pseudouridine synthase activity | 4.09E-03 |
| 40 | GO:0015266: protein channel activity | 4.09E-03 |
| 41 | GO:0004650: polygalacturonase activity | 4.24E-03 |
| 42 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 4.44E-03 |
| 43 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 5.18E-03 |
| 44 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 5.18E-03 |
| 45 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 5.18E-03 |
| 46 | GO:0005528: FK506 binding | 5.56E-03 |
| 47 | GO:0043424: protein histidine kinase binding | 5.95E-03 |
| 48 | GO:0016301: kinase activity | 1.05E-02 |
| 49 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.23E-02 |
| 50 | GO:0005200: structural constituent of cytoskeleton | 1.24E-02 |
| 51 | GO:0016413: O-acetyltransferase activity | 1.29E-02 |
| 52 | GO:0005524: ATP binding | 1.29E-02 |
| 53 | GO:0016597: amino acid binding | 1.29E-02 |
| 54 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.62E-02 |
| 55 | GO:0005525: GTP binding | 1.63E-02 |
| 56 | GO:0005096: GTPase activator activity | 1.68E-02 |
| 57 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.74E-02 |
| 58 | GO:0050897: cobalt ion binding | 1.80E-02 |
| 59 | GO:0003924: GTPase activity | 2.28E-02 |
| 60 | GO:0004519: endonuclease activity | 2.48E-02 |
| 61 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.57E-02 |
| 62 | GO:0003777: microtubule motor activity | 3.06E-02 |
| 63 | GO:0016887: ATPase activity | 3.53E-02 |
| 64 | GO:0003779: actin binding | 3.58E-02 |
| 65 | GO:0008026: ATP-dependent helicase activity | 3.81E-02 |
| 66 | GO:0019843: rRNA binding | 4.29E-02 |
| 67 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.37E-02 |
| 68 | GO:0016829: lyase activity | 4.54E-02 |
| 69 | GO:0016740: transferase activity | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009537: proplastid | 0.00E+00 |
| 2 | GO:0009513: etioplast | 2.44E-04 |
| 3 | GO:0009509: chromoplast | 4.05E-04 |
| 4 | GO:0031305: integral component of mitochondrial inner membrane | 1.93E-03 |
| 5 | GO:0048226: Casparian strip | 1.93E-03 |
| 6 | GO:0009501: amyloplast | 1.93E-03 |
| 7 | GO:0000783: nuclear telomere cap complex | 2.21E-03 |
| 8 | GO:0009507: chloroplast | 3.28E-03 |
| 9 | GO:0016602: CCAAT-binding factor complex | 4.09E-03 |
| 10 | GO:0005759: mitochondrial matrix | 7.28E-03 |
| 11 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 7.61E-03 |
| 12 | GO:0005871: kinesin complex | 8.05E-03 |
| 13 | GO:0031965: nuclear membrane | 9.90E-03 |
| 14 | GO:0005856: cytoskeleton | 2.50E-02 |
| 15 | GO:0005747: mitochondrial respiratory chain complex I | 3.28E-02 |
| 16 | GO:0012505: endomembrane system | 3.58E-02 |
| 17 | GO:0009543: chloroplast thylakoid lumen | 4.29E-02 |