GO Enrichment Analysis of Co-expressed Genes with
AT5G65090
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006489: dolichyl diphosphate biosynthetic process | 0.00E+00 |
| 2 | GO:0006488: dolichol-linked oligosaccharide biosynthetic process | 0.00E+00 |
| 3 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 4 | GO:0006511: ubiquitin-dependent protein catabolic process | 6.49E-17 |
| 5 | GO:0051603: proteolysis involved in cellular protein catabolic process | 5.47E-06 |
| 6 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 9.15E-06 |
| 7 | GO:0009612: response to mechanical stimulus | 1.32E-05 |
| 8 | GO:0009651: response to salt stress | 1.23E-04 |
| 9 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 1.41E-04 |
| 10 | GO:0031124: mRNA 3'-end processing | 1.41E-04 |
| 11 | GO:0006487: protein N-linked glycosylation | 1.52E-04 |
| 12 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.06E-04 |
| 13 | GO:0010498: proteasomal protein catabolic process | 2.40E-04 |
| 14 | GO:0055074: calcium ion homeostasis | 2.40E-04 |
| 15 | GO:0010255: glucose mediated signaling pathway | 3.49E-04 |
| 16 | GO:0002679: respiratory burst involved in defense response | 3.49E-04 |
| 17 | GO:0030163: protein catabolic process | 4.39E-04 |
| 18 | GO:0010363: regulation of plant-type hypersensitive response | 4.66E-04 |
| 19 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.90E-04 |
| 20 | GO:0016579: protein deubiquitination | 5.25E-04 |
| 21 | GO:0005513: detection of calcium ion | 5.92E-04 |
| 22 | GO:0046686: response to cadmium ion | 6.39E-04 |
| 23 | GO:0050665: hydrogen peroxide biosynthetic process | 7.24E-04 |
| 24 | GO:0001731: formation of translation preinitiation complex | 7.24E-04 |
| 25 | GO:0048827: phyllome development | 7.24E-04 |
| 26 | GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation | 7.24E-04 |
| 27 | GO:0043248: proteasome assembly | 7.24E-04 |
| 28 | GO:0009854: oxidative photosynthetic carbon pathway | 8.63E-04 |
| 29 | GO:0050821: protein stabilization | 1.16E-03 |
| 30 | GO:0006491: N-glycan processing | 1.16E-03 |
| 31 | GO:0009793: embryo development ending in seed dormancy | 1.27E-03 |
| 32 | GO:0006379: mRNA cleavage | 1.48E-03 |
| 33 | GO:0006378: mRNA polyadenylation | 2.02E-03 |
| 34 | GO:0009553: embryo sac development | 2.08E-03 |
| 35 | GO:0006790: sulfur compound metabolic process | 2.21E-03 |
| 36 | GO:0010075: regulation of meristem growth | 2.41E-03 |
| 37 | GO:0006446: regulation of translational initiation | 2.62E-03 |
| 38 | GO:0009934: regulation of meristem structural organization | 2.62E-03 |
| 39 | GO:0046854: phosphatidylinositol phosphorylation | 2.82E-03 |
| 40 | GO:0034976: response to endoplasmic reticulum stress | 3.04E-03 |
| 41 | GO:0000027: ribosomal large subunit assembly | 3.26E-03 |
| 42 | GO:0010187: negative regulation of seed germination | 3.26E-03 |
| 43 | GO:0016575: histone deacetylation | 3.49E-03 |
| 44 | GO:0010431: seed maturation | 3.72E-03 |
| 45 | GO:0006457: protein folding | 4.42E-03 |
| 46 | GO:0009306: protein secretion | 4.44E-03 |
| 47 | GO:0034220: ion transmembrane transport | 4.95E-03 |
| 48 | GO:0010154: fruit development | 5.21E-03 |
| 49 | GO:0009816: defense response to bacterium, incompatible interaction | 8.08E-03 |
| 50 | GO:0006888: ER to Golgi vesicle-mediated transport | 8.71E-03 |
| 51 | GO:0009817: defense response to fungus, incompatible interaction | 9.36E-03 |
| 52 | GO:0048767: root hair elongation | 9.69E-03 |
| 53 | GO:0010043: response to zinc ion | 1.04E-02 |
| 54 | GO:0009867: jasmonic acid mediated signaling pathway | 1.11E-02 |
| 55 | GO:0045087: innate immune response | 1.11E-02 |
| 56 | GO:0009409: response to cold | 1.15E-02 |
| 57 | GO:0006839: mitochondrial transport | 1.21E-02 |
| 58 | GO:0009926: auxin polar transport | 1.32E-02 |
| 59 | GO:0000209: protein polyubiquitination | 1.36E-02 |
| 60 | GO:0009846: pollen germination | 1.55E-02 |
| 61 | GO:0006486: protein glycosylation | 1.63E-02 |
| 62 | GO:0043086: negative regulation of catalytic activity | 1.84E-02 |
| 63 | GO:0009555: pollen development | 1.85E-02 |
| 64 | GO:0009626: plant-type hypersensitive response | 1.92E-02 |
| 65 | GO:0006413: translational initiation | 2.94E-02 |
| 66 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.20E-02 |
| 67 | GO:0009617: response to bacterium | 3.51E-02 |
| 68 | GO:0009414: response to water deprivation | 3.65E-02 |
| 69 | GO:0042742: defense response to bacterium | 3.73E-02 |
| 70 | GO:0006979: response to oxidative stress | 3.76E-02 |
| 71 | GO:0048366: leaf development | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004583: dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity | 0.00E+00 |
| 2 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 3 | GO:0004298: threonine-type endopeptidase activity | 1.49E-12 |
| 4 | GO:0008233: peptidase activity | 2.83E-07 |
| 5 | GO:0036402: proteasome-activating ATPase activity | 9.15E-06 |
| 6 | GO:0016887: ATPase activity | 5.06E-05 |
| 7 | GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity | 5.79E-05 |
| 8 | GO:0017025: TBP-class protein binding | 1.20E-04 |
| 9 | GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity | 1.41E-04 |
| 10 | GO:0051879: Hsp90 protein binding | 1.41E-04 |
| 11 | GO:0051731: polynucleotide 5'-hydroxyl-kinase activity | 1.41E-04 |
| 12 | GO:0051082: unfolded protein binding | 2.06E-04 |
| 13 | GO:0008253: 5'-nucleotidase activity | 2.40E-04 |
| 14 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 2.40E-04 |
| 15 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 3.49E-04 |
| 16 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 3.49E-04 |
| 17 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 3.49E-04 |
| 18 | GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 3.49E-04 |
| 19 | GO:0008891: glycolate oxidase activity | 4.66E-04 |
| 20 | GO:0046527: glucosyltransferase activity | 4.66E-04 |
| 21 | GO:0004559: alpha-mannosidase activity | 8.63E-04 |
| 22 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 8.63E-04 |
| 23 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.32E-03 |
| 24 | GO:0005509: calcium ion binding | 1.36E-03 |
| 25 | GO:0031625: ubiquitin protein ligase binding | 1.68E-03 |
| 26 | GO:0008327: methyl-CpG binding | 2.02E-03 |
| 27 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.41E-03 |
| 28 | GO:0004190: aspartic-type endopeptidase activity | 2.82E-03 |
| 29 | GO:0004407: histone deacetylase activity | 3.26E-03 |
| 30 | GO:0043424: protein histidine kinase binding | 3.49E-03 |
| 31 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 3.72E-03 |
| 32 | GO:0005524: ATP binding | 5.34E-03 |
| 33 | GO:0010181: FMN binding | 5.48E-03 |
| 34 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 6.02E-03 |
| 35 | GO:0004197: cysteine-type endopeptidase activity | 6.31E-03 |
| 36 | GO:0004518: nuclease activity | 6.31E-03 |
| 37 | GO:0061630: ubiquitin protein ligase activity | 7.38E-03 |
| 38 | GO:0015250: water channel activity | 7.78E-03 |
| 39 | GO:0004722: protein serine/threonine phosphatase activity | 9.22E-03 |
| 40 | GO:0000166: nucleotide binding | 1.85E-02 |
| 41 | GO:0030246: carbohydrate binding | 2.49E-02 |
| 42 | GO:0046910: pectinesterase inhibitor activity | 2.94E-02 |
| 43 | GO:0003743: translation initiation factor activity | 3.46E-02 |
| 44 | GO:0000287: magnesium ion binding | 4.17E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019867: outer membrane | 0.00E+00 |
| 2 | GO:0000502: proteasome complex | 3.21E-19 |
| 3 | GO:0005839: proteasome core complex | 1.49E-12 |
| 4 | GO:0031595: nuclear proteasome complex | 9.02E-08 |
| 5 | GO:0005783: endoplasmic reticulum | 4.71E-06 |
| 6 | GO:0031597: cytosolic proteasome complex | 1.32E-05 |
| 7 | GO:0005788: endoplasmic reticulum lumen | 2.71E-05 |
| 8 | GO:0019773: proteasome core complex, alpha-subunit complex | 3.09E-05 |
| 9 | GO:0008540: proteasome regulatory particle, base subcomplex | 4.74E-05 |
| 10 | GO:0008541: proteasome regulatory particle, lid subcomplex | 6.78E-05 |
| 11 | GO:0005774: vacuolar membrane | 1.33E-04 |
| 12 | GO:0005838: proteasome regulatory particle | 2.40E-04 |
| 13 | GO:0005849: mRNA cleavage factor complex | 3.49E-04 |
| 14 | GO:0030660: Golgi-associated vesicle membrane | 4.66E-04 |
| 15 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 4.66E-04 |
| 16 | GO:0005789: endoplasmic reticulum membrane | 6.18E-04 |
| 17 | GO:0048046: apoplast | 6.99E-04 |
| 18 | GO:0016282: eukaryotic 43S preinitiation complex | 7.24E-04 |
| 19 | GO:0033290: eukaryotic 48S preinitiation complex | 8.63E-04 |
| 20 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.16E-03 |
| 21 | GO:0005773: vacuole | 1.47E-03 |
| 22 | GO:0005829: cytosol | 1.93E-03 |
| 23 | GO:0048471: perinuclear region of cytoplasm | 2.02E-03 |
| 24 | GO:0005765: lysosomal membrane | 2.02E-03 |
| 25 | GO:0005634: nucleus | 2.17E-03 |
| 26 | GO:0031307: integral component of mitochondrial outer membrane | 2.21E-03 |
| 27 | GO:0016592: mediator complex | 6.31E-03 |
| 28 | GO:0019005: SCF ubiquitin ligase complex | 9.36E-03 |
| 29 | GO:0031966: mitochondrial membrane | 1.55E-02 |
| 30 | GO:0022626: cytosolic ribosome | 1.77E-02 |
| 31 | GO:0005747: mitochondrial respiratory chain complex I | 1.88E-02 |
| 32 | GO:0009506: plasmodesma | 2.61E-02 |
| 33 | GO:0005802: trans-Golgi network | 2.96E-02 |
| 34 | GO:0005768: endosome | 3.36E-02 |
| 35 | GO:0005618: cell wall | 4.40E-02 |
| 36 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.51E-02 |
| 37 | GO:0005737: cytoplasm | 4.52E-02 |
| 38 | GO:0009536: plastid | 4.57E-02 |