co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G63480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032928: regulation of superoxide anion generation	0.00E+00
2	GO:0045014: negative regulation of transcription by glucose	0.00E+00
3	GO:0070455: positive regulation of heme biosynthetic process	0.00E+00
4	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
5	GO:0007186: G-protein coupled receptor signaling pathway	8.55E-05
6	GO:0010070: zygote asymmetric cell division	1.12E-04
7	GO:0043686: co-translational protein modification	1.12E-04
8	GO:0051013: microtubule severing	1.12E-04
9	GO:0019478: D-amino acid catabolic process	1.12E-04
10	GO:0016122: xanthophyll metabolic process	2.61E-04
11	GO:0010069: zygote asymmetric cytokinesis in embryo sac	2.61E-04
12	GO:0009825: multidimensional cell growth	3.01E-04
13	GO:0006863: purine nucleobase transport	3.37E-04
14	GO:0006518: peptide metabolic process	4.32E-04
15	GO:0048575: short-day photoperiodism, flowering	4.32E-04
16	GO:0034090: maintenance of meiotic sister chromatid cohesion	4.32E-04
17	GO:0009686: gibberellin biosynthetic process	5.39E-04
18	GO:0033014: tetrapyrrole biosynthetic process	6.19E-04
19	GO:0009956: radial pattern formation	8.23E-04
20	GO:0010117: photoprotection	1.04E-03
21	GO:0031365: N-terminal protein amino acid modification	1.04E-03
22	GO:0009107: lipoate biosynthetic process	1.04E-03
23	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.78E-03
24	GO:0007050: cell cycle arrest	1.78E-03
25	GO:0006811: ion transport	1.82E-03
26	GO:0009416: response to light stimulus	2.02E-03
27	GO:0006783: heme biosynthetic process	2.66E-03
28	GO:0000373: Group II intron splicing	2.66E-03
29	GO:0048589: developmental growth	2.66E-03
30	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.00E-03
31	GO:0009688: abscisic acid biosynthetic process	3.30E-03
32	GO:0048829: root cap development	3.30E-03
33	GO:0016485: protein processing	3.65E-03
34	GO:0010152: pollen maturation	4.00E-03
35	GO:0009767: photosynthetic electron transport chain	4.36E-03
36	GO:0010540: basipetal auxin transport	4.74E-03
37	GO:0006302: double-strand break repair	4.74E-03
38	GO:0048768: root hair cell tip growth	4.74E-03
39	GO:0009933: meristem structural organization	4.74E-03
40	GO:0009740: gibberellic acid mediated signaling pathway	4.80E-03
41	GO:0009969: xyloglucan biosynthetic process	5.13E-03
42	GO:0080188: RNA-directed DNA methylation	5.13E-03
43	GO:0006874: cellular calcium ion homeostasis	6.35E-03
44	GO:0043622: cortical microtubule organization	6.35E-03
45	GO:0051321: meiotic cell cycle	6.78E-03
46	GO:0003333: amino acid transmembrane transport	6.78E-03
47	GO:0006306: DNA methylation	6.78E-03
48	GO:0010091: trichome branching	8.13E-03
49	GO:0048443: stamen development	8.13E-03
50	GO:0000271: polysaccharide biosynthetic process	9.08E-03
51	GO:0000226: microtubule cytoskeleton organization	9.08E-03
52	GO:0009958: positive gravitropism	9.57E-03
53	GO:0045489: pectin biosynthetic process	9.57E-03
54	GO:0010305: leaf vascular tissue pattern formation	9.57E-03
55	GO:0016567: protein ubiquitination	9.73E-03
56	GO:0009739: response to gibberellin	9.85E-03
57	GO:0009791: post-embryonic development	1.06E-02
58	GO:0031047: gene silencing by RNA	1.16E-02
59	GO:1901657: glycosyl compound metabolic process	1.22E-02
60	GO:0009639: response to red or far red light	1.27E-02
61	GO:0006464: cellular protein modification process	1.27E-02
62	GO:0006974: cellular response to DNA damage stimulus	1.56E-02
63	GO:0010411: xyloglucan metabolic process	1.62E-02
64	GO:0015995: chlorophyll biosynthetic process	1.62E-02
65	GO:0009832: plant-type cell wall biogenesis	1.80E-02
66	GO:0006865: amino acid transport	1.99E-02
67	GO:0016051: carbohydrate biosynthetic process	2.06E-02
68	GO:0016310: phosphorylation	2.28E-02
69	GO:0010114: response to red light	2.46E-02
70	GO:0009926: auxin polar transport	2.46E-02
71	GO:0042546: cell wall biogenesis	2.53E-02
72	GO:0009965: leaf morphogenesis	2.67E-02
73	GO:0008150: biological_process	2.78E-02
74	GO:0048316: seed development	3.51E-02
75	GO:0009734: auxin-activated signaling pathway	3.52E-02
76	GO:0009908: flower development	4.01E-02
77	GO:0009742: brassinosteroid mediated signaling pathway	4.08E-02
78	GO:0006468: protein phosphorylation	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0008568: microtubule-severing ATPase activity	1.12E-04
2	GO:0042586: peptide deformylase activity	1.12E-04
3	GO:0017118: lipoyltransferase activity	2.61E-04
4	GO:0016415: octanoyltransferase activity	2.61E-04
5	GO:0008805: carbon-monoxide oxygenase activity	2.61E-04
6	GO:0005345: purine nucleobase transmembrane transporter activity	4.13E-04
7	GO:0016707: gibberellin 3-beta-dioxygenase activity	4.32E-04
8	GO:0045544: gibberellin 20-oxidase activity	6.19E-04
9	GO:0004871: signal transducer activity	6.68E-04
10	GO:0010011: auxin binding	8.23E-04
11	GO:0010328: auxin influx transmembrane transporter activity	8.23E-04
12	GO:0043495: protein anchor	8.23E-04
13	GO:0004930: G-protein coupled receptor activity	8.23E-04
14	GO:0004222: metalloendopeptidase activity	1.82E-03
15	GO:0008378: galactosyltransferase activity	4.00E-03
16	GO:0004970: ionotropic glutamate receptor activity	5.13E-03
17	GO:0005217: intracellular ligand-gated ion channel activity	5.13E-03
18	GO:0008134: transcription factor binding	5.93E-03
19	GO:0008408: 3'-5' exonuclease activity	6.78E-03
20	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	7.22E-03
21	GO:0010181: FMN binding	1.01E-02
22	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.11E-02
23	GO:0008237: metallopeptidase activity	1.33E-02
24	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.62E-02
25	GO:0102483: scopolin beta-glucosidase activity	1.62E-02
26	GO:0030145: manganese ion binding	1.93E-02
27	GO:0008422: beta-glucosidase activity	2.19E-02
28	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.19E-02
29	GO:0015293: symporter activity	2.67E-02
30	GO:0004519: endonuclease activity	2.72E-02
31	GO:0015171: amino acid transmembrane transporter activity	3.27E-02
32	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.51E-02
33	GO:0015035: protein disulfide oxidoreductase activity	3.99E-02
34	GO:0004386: helicase activity	4.16E-02
35	GO:0016758: transferase activity, transferring hexosyl groups	4.50E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0000791: euchromatin	1.12E-04
3	GO:0030870: Mre11 complex	2.61E-04
4	GO:0009517: PSII associated light-harvesting complex II	8.23E-04
5	GO:0000795: synaptonemal complex	1.04E-03
6	GO:0005875: microtubule associated complex	5.52E-03
7	GO:0000419: DNA-directed RNA polymerase V complex	5.52E-03
8	GO:0043234: protein complex	5.52E-03
9	GO:0000785: chromatin	1.16E-02
10	GO:0071944: cell periphery	1.22E-02
11	GO:0090406: pollen tube	2.46E-02
12	GO:0009505: plant-type cell wall	3.16E-02
13	GO:0009570: chloroplast stroma	3.58E-02
14	GO:0005834: heterotrimeric G-protein complex	3.59E-02