co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G62770

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006005: L-fucose biosynthetic process	0.00E+00
2	GO:0006983: ER overload response	0.00E+00
3	GO:0034756: regulation of iron ion transport	0.00E+00
4	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
5	GO:0005993: trehalose catabolic process	0.00E+00
6	GO:1902065: response to L-glutamate	1.18E-04
7	GO:0034975: protein folding in endoplasmic reticulum	1.18E-04
8	GO:0000077: DNA damage checkpoint	1.18E-04
9	GO:0042350: GDP-L-fucose biosynthetic process	1.18E-04
10	GO:1990641: response to iron ion starvation	1.18E-04
11	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.18E-04
12	GO:0006101: citrate metabolic process	2.73E-04
13	GO:0043066: negative regulation of apoptotic process	2.73E-04
14	GO:0080183: response to photooxidative stress	2.73E-04
15	GO:0040020: regulation of meiotic nuclear division	2.73E-04
16	GO:0009812: flavonoid metabolic process	2.73E-04
17	GO:0009738: abscisic acid-activated signaling pathway	4.30E-04
18	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	4.52E-04
19	GO:0006065: UDP-glucuronate biosynthetic process	4.52E-04
20	GO:0006517: protein deglycosylation	4.52E-04
21	GO:0052546: cell wall pectin metabolic process	4.52E-04
22	GO:0050482: arachidonic acid secretion	6.47E-04
23	GO:0055070: copper ion homeostasis	6.47E-04
24	GO:0055089: fatty acid homeostasis	6.47E-04
25	GO:0022622: root system development	8.60E-04
26	GO:0006097: glyoxylate cycle	1.08E-03
27	GO:0009229: thiamine diphosphate biosynthetic process	1.08E-03
28	GO:0006354: DNA-templated transcription, elongation	1.33E-03
29	GO:0009228: thiamine biosynthetic process	1.33E-03
30	GO:0031930: mitochondria-nucleus signaling pathway	1.59E-03
31	GO:0030307: positive regulation of cell growth	1.87E-03
32	GO:0010044: response to aluminum ion	1.87E-03
33	GO:0046470: phosphatidylcholine metabolic process	1.87E-03
34	GO:2000014: regulation of endosperm development	1.87E-03
35	GO:0031540: regulation of anthocyanin biosynthetic process	2.16E-03
36	GO:0006102: isocitrate metabolic process	2.16E-03
37	GO:0006644: phospholipid metabolic process	2.16E-03
38	GO:0006491: N-glycan processing	2.16E-03
39	GO:1900150: regulation of defense response to fungus	2.16E-03
40	GO:0045087: innate immune response	2.23E-03
41	GO:0006379: mRNA cleavage	2.78E-03
42	GO:0010332: response to gamma radiation	2.78E-03
43	GO:0030042: actin filament depolymerization	3.12E-03
44	GO:0009086: methionine biosynthetic process	3.12E-03
45	GO:0006457: protein folding	3.32E-03
46	GO:0043069: negative regulation of programmed cell death	3.46E-03
47	GO:0009846: pollen germination	3.58E-03
48	GO:0042538: hyperosmotic salinity response	3.58E-03
49	GO:0000038: very long-chain fatty acid metabolic process	3.82E-03
50	GO:0006913: nucleocytoplasmic transport	3.82E-03
51	GO:0018107: peptidyl-threonine phosphorylation	4.57E-03
52	GO:0007034: vacuolar transport	4.97E-03
53	GO:0034605: cellular response to heat	4.97E-03
54	GO:0009408: response to heat	5.14E-03
55	GO:0010039: response to iron ion	5.37E-03
56	GO:0071732: cellular response to nitric oxide	5.37E-03
57	GO:0070588: calcium ion transmembrane transport	5.37E-03
58	GO:0007030: Golgi organization	5.37E-03
59	GO:0009901: anther dehiscence	5.37E-03
60	GO:0006396: RNA processing	5.62E-03
61	GO:0006636: unsaturated fatty acid biosynthetic process	5.79E-03
62	GO:0034976: response to endoplasmic reticulum stress	5.79E-03
63	GO:0006289: nucleotide-excision repair	6.22E-03
64	GO:0009863: salicylic acid mediated signaling pathway	6.22E-03
65	GO:0045333: cellular respiration	6.22E-03
66	GO:0006351: transcription, DNA-templated	6.36E-03
67	GO:0006334: nucleosome assembly	7.11E-03
68	GO:0048278: vesicle docking	7.11E-03
69	GO:0071369: cellular response to ethylene stimulus	8.05E-03
70	GO:0010227: floral organ abscission	8.05E-03
71	GO:0009306: protein secretion	8.53E-03
72	GO:0009735: response to cytokinin	9.51E-03
73	GO:0010197: polar nucleus fusion	1.00E-02
74	GO:0009960: endosperm development	1.00E-02
75	GO:0061025: membrane fusion	1.06E-02
76	GO:0006623: protein targeting to vacuole	1.11E-02
77	GO:0008380: RNA splicing	1.13E-02
78	GO:0009630: gravitropism	1.22E-02
79	GO:0046686: response to cadmium ion	1.28E-02
80	GO:0030163: protein catabolic process	1.28E-02
81	GO:0071281: cellular response to iron ion	1.28E-02
82	GO:0006464: cellular protein modification process	1.33E-02
83	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.57E-02
84	GO:0009816: defense response to bacterium, incompatible interaction	1.57E-02
85	GO:0009860: pollen tube growth	1.58E-02
86	GO:0006906: vesicle fusion	1.63E-02
87	GO:0048573: photoperiodism, flowering	1.70E-02
88	GO:0010119: regulation of stomatal movement	2.02E-02
89	GO:0000724: double-strand break repair via homologous recombination	2.09E-02
90	GO:0006099: tricarboxylic acid cycle	2.23E-02
91	GO:0006897: endocytosis	2.44E-02
92	GO:0006631: fatty acid metabolic process	2.44E-02
93	GO:0010114: response to red light	2.59E-02
94	GO:0016042: lipid catabolic process	2.61E-02
95	GO:0000209: protein polyubiquitination	2.66E-02
96	GO:0008152: metabolic process	2.96E-02
97	GO:0031347: regulation of defense response	2.96E-02
98	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.96E-02
99	GO:0006486: protein glycosylation	3.20E-02
100	GO:0010224: response to UV-B	3.28E-02
101	GO:0006857: oligopeptide transport	3.36E-02
102	GO:0009873: ethylene-activated signaling pathway	3.46E-02
103	GO:0006096: glycolytic process	3.60E-02
104	GO:0018105: peptidyl-serine phosphorylation	4.19E-02
105	GO:0006355: regulation of transcription, DNA-templated	4.30E-02
106	GO:0000398: mRNA splicing, via spliceosome	4.55E-02
107	GO:0009555: pollen development	4.74E-02
108	GO:0035556: intracellular signal transduction	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0050334: thiaminase activity	0.00E+00
2	GO:0034338: short-chain carboxylesterase activity	0.00E+00
3	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
4	GO:0004623: phospholipase A2 activity	1.95E-05
5	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	1.18E-04
6	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.18E-04
7	GO:0050577: GDP-L-fucose synthase activity	1.18E-04
8	GO:0015927: trehalase activity	1.18E-04
9	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	2.73E-04
10	GO:0003994: aconitate hydratase activity	2.73E-04
11	GO:0003979: UDP-glucose 6-dehydrogenase activity	4.52E-04
12	GO:0046527: glucosyltransferase activity	8.60E-04
13	GO:0009916: alternative oxidase activity	8.60E-04
14	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.08E-03
15	GO:0008641: small protein activating enzyme activity	1.08E-03
16	GO:0005509: calcium ion binding	1.36E-03
17	GO:0004630: phospholipase D activity	2.46E-03
18	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.46E-03
19	GO:0008417: fucosyltransferase activity	2.78E-03
20	GO:0043565: sequence-specific DNA binding	2.98E-03
21	GO:0030955: potassium ion binding	3.12E-03
22	GO:0004743: pyruvate kinase activity	3.12E-03
23	GO:0015198: oligopeptide transporter activity	4.19E-03
24	GO:0005388: calcium-transporting ATPase activity	4.57E-03
25	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.99E-03
26	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.99E-03
27	GO:0015035: protein disulfide oxidoreductase activity	5.62E-03
28	GO:0003700: transcription factor activity, sequence-specific DNA binding	5.87E-03
29	GO:0004707: MAP kinase activity	7.11E-03
30	GO:0003756: protein disulfide isomerase activity	8.53E-03
31	GO:0050662: coenzyme binding	1.06E-02
32	GO:0008194: UDP-glycosyltransferase activity	1.06E-02
33	GO:0016853: isomerase activity	1.06E-02
34	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.28E-02
35	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.39E-02
36	GO:0003682: chromatin binding	1.55E-02
37	GO:0004004: ATP-dependent RNA helicase activity	1.70E-02
38	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.70E-02
39	GO:0003676: nucleic acid binding	1.84E-02
40	GO:0046872: metal ion binding	1.93E-02
41	GO:0004222: metalloendopeptidase activity	1.96E-02
42	GO:0000149: SNARE binding	2.30E-02
43	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.30E-02
44	GO:0051539: 4 iron, 4 sulfur cluster binding	2.37E-02
45	GO:0005484: SNAP receptor activity	2.59E-02
46	GO:0051537: 2 iron, 2 sulfur cluster binding	2.73E-02
47	GO:0051287: NAD binding	2.96E-02
48	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.20E-02
49	GO:0022857: transmembrane transporter activity	3.94E-02
50	GO:0003779: actin binding	4.02E-02
51	GO:0004386: helicase activity	4.37E-02

Rank	GO Term	Adjusted P value
1	GO:0005737: cytoplasm	8.31E-04
2	GO:0009898: cytoplasmic side of plasma membrane	8.60E-04
3	GO:0005788: endoplasmic reticulum lumen	1.44E-03
4	GO:0016272: prefoldin complex	1.59E-03
5	GO:0030665: clathrin-coated vesicle membrane	3.12E-03
6	GO:0017119: Golgi transport complex	3.46E-03
7	GO:0043231: intracellular membrane-bounded organelle	5.82E-03
8	GO:0005783: endoplasmic reticulum	5.86E-03
9	GO:0070469: respiratory chain	6.66E-03
10	GO:0015629: actin cytoskeleton	8.05E-03
11	GO:0016592: mediator complex	1.22E-02
12	GO:0032580: Golgi cisterna membrane	1.33E-02
13	GO:0015934: large ribosomal subunit	2.02E-02
14	GO:0000325: plant-type vacuole	2.02E-02
15	GO:0005622: intracellular	2.21E-02
16	GO:0031902: late endosome membrane	2.44E-02
17	GO:0031201: SNARE complex	2.44E-02
18	GO:0005743: mitochondrial inner membrane	2.50E-02
19	GO:0005635: nuclear envelope	3.36E-02
20	GO:0005681: spliceosomal complex	3.60E-02
21	GO:0005887: integral component of plasma membrane	3.64E-02
22	GO:0016607: nuclear speck	3.68E-02
23	GO:0005834: heterotrimeric G-protein complex	3.77E-02
24	GO:0005774: vacuolar membrane	4.16E-02
25	GO:0005789: endoplasmic reticulum membrane	4.38E-02
26	GO:0009543: chloroplast thylakoid lumen	4.82E-02