GO Enrichment Analysis of Co-expressed Genes with
AT5G62740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070935: 3'-UTR-mediated mRNA stabilization | 0.00E+00 |
| 2 | GO:0006488: dolichol-linked oligosaccharide biosynthetic process | 0.00E+00 |
| 3 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 4 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.65E-17 |
| 5 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 4.25E-06 |
| 6 | GO:0009651: response to salt stress | 2.10E-05 |
| 7 | GO:0046686: response to cadmium ion | 2.37E-05 |
| 8 | GO:1900368: regulation of RNA interference | 3.64E-05 |
| 9 | GO:0051603: proteolysis involved in cellular protein catabolic process | 5.40E-05 |
| 10 | GO:0050688: regulation of defense response to virus | 9.09E-05 |
| 11 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 9.09E-05 |
| 12 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.08E-04 |
| 13 | GO:0010498: proteasomal protein catabolic process | 1.58E-04 |
| 14 | GO:0055074: calcium ion homeostasis | 1.58E-04 |
| 15 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.23E-04 |
| 16 | GO:0010255: glucose mediated signaling pathway | 2.33E-04 |
| 17 | GO:0030163: protein catabolic process | 2.41E-04 |
| 18 | GO:0016579: protein deubiquitination | 2.91E-04 |
| 19 | GO:0010363: regulation of plant-type hypersensitive response | 3.14E-04 |
| 20 | GO:0009793: embryo development ending in seed dormancy | 4.32E-04 |
| 21 | GO:0001731: formation of translation preinitiation complex | 4.92E-04 |
| 22 | GO:0009612: response to mechanical stimulus | 5.88E-04 |
| 23 | GO:0048766: root hair initiation | 7.90E-04 |
| 24 | GO:0009932: cell tip growth | 8.97E-04 |
| 25 | GO:0009553: embryo sac development | 1.17E-03 |
| 26 | GO:0048765: root hair cell differentiation | 1.36E-03 |
| 27 | GO:0046856: phosphatidylinositol dephosphorylation | 1.36E-03 |
| 28 | GO:0010075: regulation of meristem growth | 1.62E-03 |
| 29 | GO:0006446: regulation of translational initiation | 1.76E-03 |
| 30 | GO:0009934: regulation of meristem structural organization | 1.76E-03 |
| 31 | GO:0010053: root epidermal cell differentiation | 1.89E-03 |
| 32 | GO:0034976: response to endoplasmic reticulum stress | 2.04E-03 |
| 33 | GO:0006457: protein folding | 2.06E-03 |
| 34 | GO:0006487: protein N-linked glycosylation | 2.18E-03 |
| 35 | GO:0000027: ribosomal large subunit assembly | 2.18E-03 |
| 36 | GO:0010187: negative regulation of seed germination | 2.18E-03 |
| 37 | GO:0006470: protein dephosphorylation | 2.32E-03 |
| 38 | GO:0010431: seed maturation | 2.48E-03 |
| 39 | GO:0080092: regulation of pollen tube growth | 2.64E-03 |
| 40 | GO:0009306: protein secretion | 2.96E-03 |
| 41 | GO:0010154: fruit development | 3.47E-03 |
| 42 | GO:0010183: pollen tube guidance | 3.82E-03 |
| 43 | GO:0009409: response to cold | 5.32E-03 |
| 44 | GO:0048767: root hair elongation | 6.39E-03 |
| 45 | GO:0010043: response to zinc ion | 6.83E-03 |
| 46 | GO:0045087: innate immune response | 7.28E-03 |
| 47 | GO:0009867: jasmonic acid mediated signaling pathway | 7.28E-03 |
| 48 | GO:0006839: mitochondrial transport | 7.97E-03 |
| 49 | GO:0009926: auxin polar transport | 8.68E-03 |
| 50 | GO:0000209: protein polyubiquitination | 8.93E-03 |
| 51 | GO:0043086: negative regulation of catalytic activity | 1.20E-02 |
| 52 | GO:0006413: translational initiation | 1.92E-02 |
| 53 | GO:0009414: response to water deprivation | 2.00E-02 |
| 54 | GO:0006979: response to oxidative stress | 2.07E-02 |
| 55 | GO:0009860: pollen tube growth | 2.91E-02 |
| 56 | GO:0048366: leaf development | 3.10E-02 |
| 57 | GO:0046777: protein autophosphorylation | 3.38E-02 |
| 58 | GO:0045454: cell redox homeostasis | 3.66E-02 |
| 59 | GO:0009408: response to heat | 4.25E-02 |
| 60 | GO:0009737: response to abscisic acid | 4.36E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004583: dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity | 0.00E+00 |
| 2 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 3 | GO:0004298: threonine-type endopeptidase activity | 5.01E-11 |
| 4 | GO:0008233: peptidase activity | 1.44E-06 |
| 5 | GO:0036402: proteasome-activating ATPase activity | 4.25E-06 |
| 6 | GO:0016887: ATPase activity | 1.22E-05 |
| 7 | GO:0017025: TBP-class protein binding | 6.14E-05 |
| 8 | GO:0051082: unfolded protein binding | 8.74E-05 |
| 9 | GO:0008253: 5'-nucleotidase activity | 1.58E-04 |
| 10 | GO:0046527: glucosyltransferase activity | 3.14E-04 |
| 11 | GO:0004722: protein serine/threonine phosphatase activity | 6.36E-04 |
| 12 | GO:0005524: ATP binding | 8.00E-04 |
| 13 | GO:0031625: ubiquitin protein ligase binding | 9.47E-04 |
| 14 | GO:0008327: methyl-CpG binding | 1.36E-03 |
| 15 | GO:0001054: RNA polymerase I activity | 1.36E-03 |
| 16 | GO:0001056: RNA polymerase III activity | 1.49E-03 |
| 17 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.62E-03 |
| 18 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.48E-03 |
| 19 | GO:0047134: protein-disulfide reductase activity | 3.13E-03 |
| 20 | GO:0004791: thioredoxin-disulfide reductase activity | 3.64E-03 |
| 21 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 4.00E-03 |
| 22 | GO:0061630: ubiquitin protein ligase activity | 4.07E-03 |
| 23 | GO:0004197: cysteine-type endopeptidase activity | 4.19E-03 |
| 24 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.07E-02 |
| 25 | GO:0030246: carbohydrate binding | 1.36E-02 |
| 26 | GO:0005509: calcium ion binding | 1.89E-02 |
| 27 | GO:0046910: pectinesterase inhibitor activity | 1.92E-02 |
| 28 | GO:0003743: translation initiation factor activity | 2.26E-02 |
| 29 | GO:0042802: identical protein binding | 2.40E-02 |
| 30 | GO:0000287: magnesium ion binding | 2.72E-02 |
| 31 | GO:0004842: ubiquitin-protein transferase activity | 2.84E-02 |
| 32 | GO:0016787: hydrolase activity | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019867: outer membrane | 0.00E+00 |
| 2 | GO:0000502: proteasome complex | 1.48E-18 |
| 3 | GO:0005839: proteasome core complex | 5.01E-11 |
| 4 | GO:0031595: nuclear proteasome complex | 3.01E-08 |
| 5 | GO:0031597: cytosolic proteasome complex | 6.19E-06 |
| 6 | GO:0005788: endoplasmic reticulum lumen | 1.01E-05 |
| 7 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.49E-05 |
| 8 | GO:0008540: proteasome regulatory particle, base subcomplex | 2.32E-05 |
| 9 | GO:0008541: proteasome regulatory particle, lid subcomplex | 3.37E-05 |
| 10 | GO:0005829: cytosol | 7.14E-05 |
| 11 | GO:0005838: proteasome regulatory particle | 1.58E-04 |
| 12 | GO:0005783: endoplasmic reticulum | 1.62E-04 |
| 13 | GO:0016282: eukaryotic 43S preinitiation complex | 4.92E-04 |
| 14 | GO:0033290: eukaryotic 48S preinitiation complex | 5.88E-04 |
| 15 | GO:0005774: vacuolar membrane | 8.81E-04 |
| 16 | GO:0048046: apoplast | 9.59E-04 |
| 17 | GO:0005736: DNA-directed RNA polymerase I complex | 1.01E-03 |
| 18 | GO:0005666: DNA-directed RNA polymerase III complex | 1.12E-03 |
| 19 | GO:0005634: nucleus | 1.18E-03 |
| 20 | GO:0048471: perinuclear region of cytoplasm | 1.36E-03 |
| 21 | GO:0016592: mediator complex | 4.19E-03 |
| 22 | GO:0005737: cytoplasm | 5.45E-03 |
| 23 | GO:0019005: SCF ubiquitin ligase complex | 6.18E-03 |
| 24 | GO:0005773: vacuole | 7.66E-03 |
| 25 | GO:0022626: cytosolic ribosome | 9.66E-03 |
| 26 | GO:0031966: mitochondrial membrane | 1.02E-02 |
| 27 | GO:0009543: chloroplast thylakoid lumen | 1.61E-02 |
| 28 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.95E-02 |
| 29 | GO:0009506: plasmodesma | 3.01E-02 |
| 30 | GO:0005789: endoplasmic reticulum membrane | 3.14E-02 |
| 31 | GO:0005730: nucleolus | 3.47E-02 |
| 32 | GO:0005743: mitochondrial inner membrane | 4.03E-02 |