GO Enrichment Analysis of Co-expressed Genes with
AT5G62670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 2 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 3 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 4 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 5 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 6 | GO:0009904: chloroplast accumulation movement | 1.46E-05 |
| 7 | GO:0009903: chloroplast avoidance movement | 3.14E-05 |
| 8 | GO:0015979: photosynthesis | 5.32E-05 |
| 9 | GO:1904966: positive regulation of vitamin E biosynthetic process | 9.88E-05 |
| 10 | GO:0000481: maturation of 5S rRNA | 9.88E-05 |
| 11 | GO:1904964: positive regulation of phytol biosynthetic process | 9.88E-05 |
| 12 | GO:0042371: vitamin K biosynthetic process | 9.88E-05 |
| 13 | GO:0071461: cellular response to redox state | 9.88E-05 |
| 14 | GO:0034337: RNA folding | 9.88E-05 |
| 15 | GO:0010362: negative regulation of anion channel activity by blue light | 9.88E-05 |
| 16 | GO:0009443: pyridoxal 5'-phosphate salvage | 9.88E-05 |
| 17 | GO:0051775: response to redox state | 9.88E-05 |
| 18 | GO:0018298: protein-chromophore linkage | 1.11E-04 |
| 19 | GO:0043085: positive regulation of catalytic activity | 1.48E-04 |
| 20 | GO:0010541: acropetal auxin transport | 2.32E-04 |
| 21 | GO:0010155: regulation of proton transport | 2.32E-04 |
| 22 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.32E-04 |
| 23 | GO:0080005: photosystem stoichiometry adjustment | 2.32E-04 |
| 24 | GO:0006833: water transport | 2.84E-04 |
| 25 | GO:0007017: microtubule-based process | 3.49E-04 |
| 26 | GO:0005977: glycogen metabolic process | 3.86E-04 |
| 27 | GO:0000913: preprophase band assembly | 3.86E-04 |
| 28 | GO:0048281: inflorescence morphogenesis | 3.86E-04 |
| 29 | GO:0031022: nuclear migration along microfilament | 3.86E-04 |
| 30 | GO:0010160: formation of animal organ boundary | 3.86E-04 |
| 31 | GO:2001141: regulation of RNA biosynthetic process | 5.54E-04 |
| 32 | GO:0006107: oxaloacetate metabolic process | 5.54E-04 |
| 33 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 5.54E-04 |
| 34 | GO:0010148: transpiration | 5.54E-04 |
| 35 | GO:0009226: nucleotide-sugar biosynthetic process | 5.54E-04 |
| 36 | GO:0034220: ion transmembrane transport | 5.80E-04 |
| 37 | GO:0008654: phospholipid biosynthetic process | 7.16E-04 |
| 38 | GO:0006734: NADH metabolic process | 7.37E-04 |
| 39 | GO:0010021: amylopectin biosynthetic process | 7.37E-04 |
| 40 | GO:0006661: phosphatidylinositol biosynthetic process | 7.37E-04 |
| 41 | GO:0009765: photosynthesis, light harvesting | 7.37E-04 |
| 42 | GO:0006109: regulation of carbohydrate metabolic process | 7.37E-04 |
| 43 | GO:2000122: negative regulation of stomatal complex development | 7.37E-04 |
| 44 | GO:0006546: glycine catabolic process | 7.37E-04 |
| 45 | GO:0032502: developmental process | 8.14E-04 |
| 46 | GO:0010375: stomatal complex patterning | 9.32E-04 |
| 47 | GO:0043097: pyrimidine nucleoside salvage | 9.32E-04 |
| 48 | GO:0050665: hydrogen peroxide biosynthetic process | 1.14E-03 |
| 49 | GO:0006206: pyrimidine nucleobase metabolic process | 1.14E-03 |
| 50 | GO:0060918: auxin transport | 1.14E-03 |
| 51 | GO:0015995: chlorophyll biosynthetic process | 1.27E-03 |
| 52 | GO:0010189: vitamin E biosynthetic process | 1.36E-03 |
| 53 | GO:0009854: oxidative photosynthetic carbon pathway | 1.36E-03 |
| 54 | GO:0010019: chloroplast-nucleus signaling pathway | 1.36E-03 |
| 55 | GO:0009645: response to low light intensity stimulus | 1.59E-03 |
| 56 | GO:0006400: tRNA modification | 1.59E-03 |
| 57 | GO:0010103: stomatal complex morphogenesis | 1.59E-03 |
| 58 | GO:0010374: stomatal complex development | 1.59E-03 |
| 59 | GO:0070370: cellular heat acclimation | 1.59E-03 |
| 60 | GO:0009409: response to cold | 1.75E-03 |
| 61 | GO:0009637: response to blue light | 1.77E-03 |
| 62 | GO:0009690: cytokinin metabolic process | 1.84E-03 |
| 63 | GO:0006605: protein targeting | 1.84E-03 |
| 64 | GO:0032508: DNA duplex unwinding | 1.84E-03 |
| 65 | GO:0042255: ribosome assembly | 1.84E-03 |
| 66 | GO:0006353: DNA-templated transcription, termination | 1.84E-03 |
| 67 | GO:0010052: guard cell differentiation | 2.10E-03 |
| 68 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.10E-03 |
| 69 | GO:0017004: cytochrome complex assembly | 2.10E-03 |
| 70 | GO:0071482: cellular response to light stimulus | 2.10E-03 |
| 71 | GO:0001558: regulation of cell growth | 2.10E-03 |
| 72 | GO:0005975: carbohydrate metabolic process | 2.14E-03 |
| 73 | GO:0055085: transmembrane transport | 2.24E-03 |
| 74 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.37E-03 |
| 75 | GO:0009638: phototropism | 2.65E-03 |
| 76 | GO:0043069: negative regulation of programmed cell death | 2.95E-03 |
| 77 | GO:0006352: DNA-templated transcription, initiation | 3.25E-03 |
| 78 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.25E-03 |
| 79 | GO:0009684: indoleacetic acid biosynthetic process | 3.25E-03 |
| 80 | GO:0019684: photosynthesis, light reaction | 3.25E-03 |
| 81 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.25E-03 |
| 82 | GO:0008361: regulation of cell size | 3.57E-03 |
| 83 | GO:0006629: lipid metabolic process | 3.80E-03 |
| 84 | GO:0006108: malate metabolic process | 3.89E-03 |
| 85 | GO:0009767: photosynthetic electron transport chain | 3.89E-03 |
| 86 | GO:0009785: blue light signaling pathway | 3.89E-03 |
| 87 | GO:0010540: basipetal auxin transport | 4.22E-03 |
| 88 | GO:0019253: reductive pentose-phosphate cycle | 4.22E-03 |
| 89 | GO:0010207: photosystem II assembly | 4.22E-03 |
| 90 | GO:0042343: indole glucosinolate metabolic process | 4.57E-03 |
| 91 | GO:0009944: polarity specification of adaxial/abaxial axis | 5.28E-03 |
| 92 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.65E-03 |
| 93 | GO:0051302: regulation of cell division | 5.65E-03 |
| 94 | GO:0098542: defense response to other organism | 6.03E-03 |
| 95 | GO:0010431: seed maturation | 6.03E-03 |
| 96 | GO:0001944: vasculature development | 6.82E-03 |
| 97 | GO:0006413: translational initiation | 6.92E-03 |
| 98 | GO:0009306: protein secretion | 7.23E-03 |
| 99 | GO:0048443: stamen development | 7.23E-03 |
| 100 | GO:0008033: tRNA processing | 8.07E-03 |
| 101 | GO:0006810: transport | 8.15E-03 |
| 102 | GO:0006662: glycerol ether metabolic process | 8.50E-03 |
| 103 | GO:0045489: pectin biosynthetic process | 8.50E-03 |
| 104 | GO:0009958: positive gravitropism | 8.50E-03 |
| 105 | GO:0007018: microtubule-based movement | 8.94E-03 |
| 106 | GO:0019252: starch biosynthetic process | 9.39E-03 |
| 107 | GO:0010583: response to cyclopentenone | 1.03E-02 |
| 108 | GO:0016032: viral process | 1.03E-02 |
| 109 | GO:0009639: response to red or far red light | 1.13E-02 |
| 110 | GO:0009658: chloroplast organization | 1.15E-02 |
| 111 | GO:0000910: cytokinesis | 1.23E-02 |
| 112 | GO:0010027: thylakoid membrane organization | 1.28E-02 |
| 113 | GO:0009627: systemic acquired resistance | 1.38E-02 |
| 114 | GO:0046777: protein autophosphorylation | 1.53E-02 |
| 115 | GO:0000160: phosphorelay signal transduction system | 1.60E-02 |
| 116 | GO:0010218: response to far red light | 1.65E-02 |
| 117 | GO:0048527: lateral root development | 1.71E-02 |
| 118 | GO:0010119: regulation of stomatal movement | 1.71E-02 |
| 119 | GO:0016310: phosphorylation | 1.77E-02 |
| 120 | GO:0034599: cellular response to oxidative stress | 1.88E-02 |
| 121 | GO:0006099: tricarboxylic acid cycle | 1.88E-02 |
| 122 | GO:0042742: defense response to bacterium | 1.92E-02 |
| 123 | GO:0006631: fatty acid metabolic process | 2.06E-02 |
| 124 | GO:0009926: auxin polar transport | 2.18E-02 |
| 125 | GO:0009640: photomorphogenesis | 2.18E-02 |
| 126 | GO:0042546: cell wall biogenesis | 2.24E-02 |
| 127 | GO:0009644: response to high light intensity | 2.31E-02 |
| 128 | GO:0009965: leaf morphogenesis | 2.37E-02 |
| 129 | GO:0006855: drug transmembrane transport | 2.44E-02 |
| 130 | GO:0009664: plant-type cell wall organization | 2.57E-02 |
| 131 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.77E-02 |
| 132 | GO:0006096: glycolytic process | 3.04E-02 |
| 133 | GO:0043086: negative regulation of catalytic activity | 3.04E-02 |
| 134 | GO:0046686: response to cadmium ion | 3.35E-02 |
| 135 | GO:0009058: biosynthetic process | 4.22E-02 |
| 136 | GO:0006633: fatty acid biosynthetic process | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 2 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 3 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 4 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 5 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 6 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 7 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 8 | GO:0019899: enzyme binding | 4.27E-05 |
| 9 | GO:0008746: NAD(P)+ transhydrogenase activity | 9.88E-05 |
| 10 | GO:0004328: formamidase activity | 9.88E-05 |
| 11 | GO:0046906: tetrapyrrole binding | 9.88E-05 |
| 12 | GO:0080132: fatty acid alpha-hydroxylase activity | 9.88E-05 |
| 13 | GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity | 9.88E-05 |
| 14 | GO:0019156: isoamylase activity | 2.32E-04 |
| 15 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.32E-04 |
| 16 | GO:0004047: aminomethyltransferase activity | 2.32E-04 |
| 17 | GO:0048531: beta-1,3-galactosyltransferase activity | 2.32E-04 |
| 18 | GO:0070402: NADPH binding | 3.86E-04 |
| 19 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 5.54E-04 |
| 20 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 5.54E-04 |
| 21 | GO:0009882: blue light photoreceptor activity | 5.54E-04 |
| 22 | GO:0017057: 6-phosphogluconolactonase activity | 5.54E-04 |
| 23 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 5.54E-04 |
| 24 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 5.54E-04 |
| 25 | GO:0010181: FMN binding | 6.69E-04 |
| 26 | GO:0042277: peptide binding | 7.37E-04 |
| 27 | GO:0008891: glycolate oxidase activity | 7.37E-04 |
| 28 | GO:0001053: plastid sigma factor activity | 7.37E-04 |
| 29 | GO:0016987: sigma factor activity | 7.37E-04 |
| 30 | GO:0019199: transmembrane receptor protein kinase activity | 7.37E-04 |
| 31 | GO:0043495: protein anchor | 7.37E-04 |
| 32 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 7.37E-04 |
| 33 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 7.37E-04 |
| 34 | GO:0008374: O-acyltransferase activity | 9.32E-04 |
| 35 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 9.32E-04 |
| 36 | GO:0004040: amidase activity | 9.32E-04 |
| 37 | GO:0005200: structural constituent of cytoskeleton | 9.73E-04 |
| 38 | GO:0015250: water channel activity | 1.09E-03 |
| 39 | GO:0004556: alpha-amylase activity | 1.14E-03 |
| 40 | GO:0016615: malate dehydrogenase activity | 1.14E-03 |
| 41 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.14E-03 |
| 42 | GO:0016168: chlorophyll binding | 1.15E-03 |
| 43 | GO:0003824: catalytic activity | 1.21E-03 |
| 44 | GO:0030060: L-malate dehydrogenase activity | 1.36E-03 |
| 45 | GO:0004849: uridine kinase activity | 1.36E-03 |
| 46 | GO:0016491: oxidoreductase activity | 1.67E-03 |
| 47 | GO:0003993: acid phosphatase activity | 1.84E-03 |
| 48 | GO:0004033: aldo-keto reductase (NADP) activity | 1.84E-03 |
| 49 | GO:0030955: potassium ion binding | 2.65E-03 |
| 50 | GO:0004743: pyruvate kinase activity | 2.65E-03 |
| 51 | GO:0008047: enzyme activator activity | 2.95E-03 |
| 52 | GO:0003924: GTPase activity | 3.80E-03 |
| 53 | GO:0008081: phosphoric diester hydrolase activity | 3.89E-03 |
| 54 | GO:0000155: phosphorelay sensor kinase activity | 3.89E-03 |
| 55 | GO:0004565: beta-galactosidase activity | 3.89E-03 |
| 56 | GO:0010329: auxin efflux transmembrane transporter activity | 3.89E-03 |
| 57 | GO:0031409: pigment binding | 4.92E-03 |
| 58 | GO:0004857: enzyme inhibitor activity | 5.28E-03 |
| 59 | GO:0005528: FK506 binding | 5.28E-03 |
| 60 | GO:0022891: substrate-specific transmembrane transporter activity | 6.82E-03 |
| 61 | GO:0030570: pectate lyase activity | 6.82E-03 |
| 62 | GO:0003727: single-stranded RNA binding | 7.23E-03 |
| 63 | GO:0047134: protein-disulfide reductase activity | 7.64E-03 |
| 64 | GO:0004672: protein kinase activity | 8.15E-03 |
| 65 | GO:0003729: mRNA binding | 8.31E-03 |
| 66 | GO:0008080: N-acetyltransferase activity | 8.50E-03 |
| 67 | GO:0004791: thioredoxin-disulfide reductase activity | 8.94E-03 |
| 68 | GO:0042802: identical protein binding | 9.44E-03 |
| 69 | GO:0048038: quinone binding | 9.85E-03 |
| 70 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.08E-02 |
| 71 | GO:0008483: transaminase activity | 1.18E-02 |
| 72 | GO:0005525: GTP binding | 1.48E-02 |
| 73 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.54E-02 |
| 74 | GO:0015238: drug transmembrane transporter activity | 1.60E-02 |
| 75 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.94E-02 |
| 76 | GO:0004185: serine-type carboxypeptidase activity | 2.18E-02 |
| 77 | GO:0016301: kinase activity | 2.24E-02 |
| 78 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.44E-02 |
| 79 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.70E-02 |
| 80 | GO:0003690: double-stranded DNA binding | 2.77E-02 |
| 81 | GO:0003777: microtubule motor activity | 2.90E-02 |
| 82 | GO:0004650: polygalacturonase activity | 3.25E-02 |
| 83 | GO:0016887: ATPase activity | 3.27E-02 |
| 84 | GO:0015035: protein disulfide oxidoreductase activity | 3.54E-02 |
| 85 | GO:0019843: rRNA binding | 4.07E-02 |
| 86 | GO:0016829: lyase activity | 4.30E-02 |
| 87 | GO:0015144: carbohydrate transmembrane transporter activity | 4.62E-02 |
| 88 | GO:0005515: protein binding | 4.65E-02 |
| 89 | GO:0015297: antiporter activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.30E-13 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 8.46E-07 |
| 4 | GO:0009941: chloroplast envelope | 1.97E-05 |
| 5 | GO:0009570: chloroplast stroma | 6.86E-05 |
| 6 | GO:0009782: photosystem I antenna complex | 9.88E-05 |
| 7 | GO:0005773: vacuole | 1.52E-04 |
| 8 | GO:0042651: thylakoid membrane | 3.49E-04 |
| 9 | GO:0031969: chloroplast membrane | 3.63E-04 |
| 10 | GO:0015630: microtubule cytoskeleton | 5.54E-04 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 6.91E-04 |
| 12 | GO:0009898: cytoplasmic side of plasma membrane | 7.37E-04 |
| 13 | GO:0010319: stromule | 9.73E-04 |
| 14 | GO:0016020: membrane | 1.03E-03 |
| 15 | GO:0046658: anchored component of plasma membrane | 1.45E-03 |
| 16 | GO:0009986: cell surface | 1.59E-03 |
| 17 | GO:0009579: thylakoid | 2.05E-03 |
| 18 | GO:0005874: microtubule | 2.22E-03 |
| 19 | GO:0045298: tubulin complex | 2.37E-03 |
| 20 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.37E-03 |
| 21 | GO:0048046: apoplast | 2.91E-03 |
| 22 | GO:0032040: small-subunit processome | 3.57E-03 |
| 23 | GO:0030076: light-harvesting complex | 4.57E-03 |
| 24 | GO:0009654: photosystem II oxygen evolving complex | 5.65E-03 |
| 25 | GO:0016021: integral component of membrane | 6.21E-03 |
| 26 | GO:0005871: kinesin complex | 7.64E-03 |
| 27 | GO:0009522: photosystem I | 8.94E-03 |
| 28 | GO:0009523: photosystem II | 9.39E-03 |
| 29 | GO:0019898: extrinsic component of membrane | 9.39E-03 |
| 30 | GO:0009504: cell plate | 9.39E-03 |
| 31 | GO:0009534: chloroplast thylakoid | 1.00E-02 |
| 32 | GO:0005694: chromosome | 1.03E-02 |
| 33 | GO:0031225: anchored component of membrane | 1.38E-02 |
| 34 | GO:0005819: spindle | 1.94E-02 |
| 35 | GO:0031977: thylakoid lumen | 2.06E-02 |
| 36 | GO:0005886: plasma membrane | 2.22E-02 |
| 37 | GO:0009505: plant-type cell wall | 2.55E-02 |
| 38 | GO:0005887: integral component of plasma membrane | 2.87E-02 |
| 39 | GO:0005774: vacuolar membrane | 2.94E-02 |
| 40 | GO:0010287: plastoglobule | 3.92E-02 |
| 41 | GO:0005623: cell | 4.15E-02 |
| 42 | GO:0009524: phragmoplast | 4.22E-02 |
| 43 | GO:0005777: peroxisome | 4.29E-02 |