co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G62520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
2	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
3	GO:0010273: detoxification of copper ion	0.00E+00
4	GO:0015690: aluminum cation transport	0.00E+00
5	GO:0010324: membrane invagination	0.00E+00
6	GO:0009611: response to wounding	1.05E-06
7	GO:0009753: response to jasmonic acid	1.53E-06
8	GO:0071456: cellular response to hypoxia	2.12E-06
9	GO:0010112: regulation of systemic acquired resistance	5.88E-06
10	GO:0009643: photosynthetic acclimation	6.98E-05
11	GO:0009625: response to insect	8.12E-05
12	GO:0006952: defense response	9.44E-05
13	GO:0006979: response to oxidative stress	9.70E-05
14	GO:0009751: response to salicylic acid	1.06E-04
15	GO:0009737: response to abscisic acid	1.99E-04
16	GO:0048508: embryonic meristem development	2.00E-04
17	GO:0015760: glucose-6-phosphate transport	2.00E-04
18	GO:0019567: arabinose biosynthetic process	2.00E-04
19	GO:0080173: male-female gamete recognition during double fertilization	2.00E-04
20	GO:0033306: phytol metabolic process	2.00E-04
21	GO:0009700: indole phytoalexin biosynthetic process	2.00E-04
22	GO:0009270: response to humidity	2.00E-04
23	GO:1990542: mitochondrial transmembrane transport	2.00E-04
24	GO:0010120: camalexin biosynthetic process	2.04E-04
25	GO:0010200: response to chitin	3.24E-04
26	GO:1903507: negative regulation of nucleic acid-templated transcription	4.04E-04
27	GO:0009414: response to water deprivation	4.06E-04
28	GO:0042742: defense response to bacterium	4.30E-04
29	GO:0006527: arginine catabolic process	4.48E-04
30	GO:0019521: D-gluconate metabolic process	4.48E-04
31	GO:0044419: interspecies interaction between organisms	4.48E-04
32	GO:0009945: radial axis specification	4.48E-04
33	GO:0015712: hexose phosphate transport	4.48E-04
34	GO:0015865: purine nucleotide transport	4.48E-04
35	GO:0019725: cellular homeostasis	4.48E-04
36	GO:0009446: putrescine biosynthetic process	4.48E-04
37	GO:0050832: defense response to fungus	5.06E-04
38	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	7.29E-04
39	GO:0015714: phosphoenolpyruvate transport	7.29E-04
40	GO:1900055: regulation of leaf senescence	7.29E-04
41	GO:0006954: inflammatory response	7.29E-04
42	GO:0035436: triose phosphate transmembrane transport	7.29E-04
43	GO:0045793: positive regulation of cell size	7.29E-04
44	GO:0010186: positive regulation of cellular defense response	7.29E-04
45	GO:0051707: response to other organism	7.78E-04
46	GO:2000377: regulation of reactive oxygen species metabolic process	8.13E-04
47	GO:0031347: regulation of defense response	9.86E-04
48	GO:0048194: Golgi vesicle budding	1.04E-03
49	GO:0046902: regulation of mitochondrial membrane permeability	1.04E-03
50	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.07E-03
51	GO:0010109: regulation of photosynthesis	1.38E-03
52	GO:0060548: negative regulation of cell death	1.38E-03
53	GO:0045227: capsule polysaccharide biosynthetic process	1.38E-03
54	GO:0033358: UDP-L-arabinose biosynthetic process	1.38E-03
55	GO:0015713: phosphoglycerate transport	1.38E-03
56	GO:0008295: spermidine biosynthetic process	1.38E-03
57	GO:0009694: jasmonic acid metabolic process	1.38E-03
58	GO:1901141: regulation of lignin biosynthetic process	1.38E-03
59	GO:0042391: regulation of membrane potential	1.47E-03
60	GO:0009626: plant-type hypersensitive response	1.50E-03
61	GO:0009646: response to absence of light	1.70E-03
62	GO:0034052: positive regulation of plant-type hypersensitive response	1.76E-03
63	GO:0009164: nucleoside catabolic process	1.76E-03
64	GO:0009697: salicylic acid biosynthetic process	1.76E-03
65	GO:0010193: response to ozone	1.95E-03
66	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.17E-03
67	GO:0006596: polyamine biosynthetic process	2.17E-03
68	GO:0009759: indole glucosinolate biosynthetic process	2.17E-03
69	GO:0009942: longitudinal axis specification	2.60E-03
70	GO:0009409: response to cold	2.92E-03
71	GO:0071446: cellular response to salicylic acid stimulus	3.06E-03
72	GO:1900056: negative regulation of leaf senescence	3.06E-03
73	GO:1900057: positive regulation of leaf senescence	3.06E-03
74	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.06E-03
75	GO:0006950: response to stress	3.29E-03
76	GO:0010150: leaf senescence	3.50E-03
77	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.55E-03
78	GO:0009819: drought recovery	3.55E-03
79	GO:0043068: positive regulation of programmed cell death	3.55E-03
80	GO:0009407: toxin catabolic process	4.02E-03
81	GO:2000031: regulation of salicylic acid mediated signaling pathway	4.06E-03
82	GO:0010204: defense response signaling pathway, resistance gene-independent	4.06E-03
83	GO:0006470: protein dephosphorylation	4.15E-03
84	GO:0010119: regulation of stomatal movement	4.21E-03
85	GO:0009835: fruit ripening	4.60E-03
86	GO:0006098: pentose-phosphate shunt	4.60E-03
87	GO:0019432: triglyceride biosynthetic process	4.60E-03
88	GO:0046916: cellular transition metal ion homeostasis	4.60E-03
89	GO:0009056: catabolic process	4.60E-03
90	GO:0009867: jasmonic acid mediated signaling pathway	4.61E-03
91	GO:0048268: clathrin coat assembly	5.15E-03
92	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.15E-03
93	GO:0008202: steroid metabolic process	5.15E-03
94	GO:0006897: endocytosis	5.48E-03
95	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.74E-03
96	GO:0006032: chitin catabolic process	5.74E-03
97	GO:0009682: induced systemic resistance	6.34E-03
98	GO:0009636: response to toxic substance	6.68E-03
99	GO:0009266: response to temperature stimulus	8.28E-03
100	GO:0034605: cellular response to heat	8.28E-03
101	GO:0009225: nucleotide-sugar metabolic process	8.97E-03
102	GO:0046688: response to copper ion	8.97E-03
103	GO:0015979: photosynthesis	9.49E-03
104	GO:0055085: transmembrane transport	9.94E-03
105	GO:0009620: response to fungus	1.04E-02
106	GO:0006874: cellular calcium ion homeostasis	1.12E-02
107	GO:0006825: copper ion transport	1.12E-02
108	GO:0009624: response to nematode	1.14E-02
109	GO:0016998: cell wall macromolecule catabolic process	1.19E-02
110	GO:0031348: negative regulation of defense response	1.27E-02
111	GO:0009408: response to heat	1.32E-02
112	GO:0006012: galactose metabolic process	1.35E-02
113	GO:0009693: ethylene biosynthetic process	1.35E-02
114	GO:0006468: protein phosphorylation	1.47E-02
115	GO:0070417: cellular response to cold	1.52E-02
116	GO:0042631: cellular response to water deprivation	1.60E-02
117	GO:0000271: polysaccharide biosynthetic process	1.60E-02
118	GO:0009790: embryo development	1.67E-02
119	GO:0045489: pectin biosynthetic process	1.69E-02
120	GO:0009651: response to salt stress	1.71E-02
121	GO:0009749: response to glucose	1.87E-02
122	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.88E-02
123	GO:0000302: response to reactive oxygen species	1.97E-02
124	GO:0019761: glucosinolate biosynthetic process	2.06E-02
125	GO:0007166: cell surface receptor signaling pathway	2.27E-02
126	GO:0006904: vesicle docking involved in exocytosis	2.35E-02
127	GO:0009617: response to bacterium	2.37E-02
128	GO:0009738: abscisic acid-activated signaling pathway	2.60E-02
129	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.66E-02
130	GO:0010029: regulation of seed germination	2.66E-02
131	GO:0009416: response to light stimulus	2.71E-02
132	GO:0009627: systemic acquired resistance	2.76E-02
133	GO:0009832: plant-type cell wall biogenesis	3.20E-02
134	GO:0045893: positive regulation of transcription, DNA-templated	3.22E-02
135	GO:0006970: response to osmotic stress	3.30E-02
136	GO:0009910: negative regulation of flower development	3.42E-02
137	GO:0009631: cold acclimation	3.42E-02
138	GO:0006810: transport	3.53E-02
139	GO:0009723: response to ethylene	3.55E-02
140	GO:0009853: photorespiration	3.65E-02
141	GO:0045087: innate immune response	3.65E-02
142	GO:0016051: carbohydrate biosynthetic process	3.65E-02
143	GO:0080167: response to karrikin	3.80E-02
144	GO:0016567: protein ubiquitination	3.87E-02
145	GO:0006839: mitochondrial transport	4.01E-02
146	GO:0030001: metal ion transport	4.01E-02
147	GO:0006887: exocytosis	4.13E-02
148	GO:0009744: response to sucrose	4.37E-02
149	GO:0045892: negative regulation of transcription, DNA-templated	4.61E-02
150	GO:0006855: drug transmembrane transport	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0080131: hydroxyjasmonate sulfotransferase activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.16E-05
4	GO:0004012: phospholipid-translocating ATPase activity	9.69E-05
5	GO:0019901: protein kinase binding	1.60E-04
6	GO:2001227: quercitrin binding	2.00E-04
7	GO:0019707: protein-cysteine S-acyltransferase activity	2.00E-04
8	GO:2001147: camalexin binding	2.00E-04
9	GO:0008792: arginine decarboxylase activity	2.00E-04
10	GO:0004568: chitinase activity	3.48E-04
11	GO:0047364: desulfoglucosinolate sulfotransferase activity	4.48E-04
12	GO:0015152: glucose-6-phosphate transmembrane transporter activity	4.48E-04
13	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	4.48E-04
14	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	4.48E-04
15	GO:0030552: cAMP binding	6.61E-04
16	GO:0030553: cGMP binding	6.61E-04
17	GO:0008146: sulfotransferase activity	6.61E-04
18	GO:0004324: ferredoxin-NADP+ reductase activity	7.29E-04
19	GO:0071917: triose-phosphate transmembrane transporter activity	7.29E-04
20	GO:0003714: transcription corepressor activity	8.13E-04
21	GO:0005216: ion channel activity	8.95E-04
22	GO:0017077: oxidative phosphorylation uncoupler activity	1.04E-03
23	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.26E-03
24	GO:0004737: pyruvate decarboxylase activity	1.38E-03
25	GO:0015120: phosphoglycerate transmembrane transporter activity	1.38E-03
26	GO:0050373: UDP-arabinose 4-epimerase activity	1.38E-03
27	GO:0030551: cyclic nucleotide binding	1.47E-03
28	GO:0005249: voltage-gated potassium channel activity	1.47E-03
29	GO:0005496: steroid binding	1.76E-03
30	GO:0047631: ADP-ribose diphosphatase activity	1.76E-03
31	GO:0005471: ATP:ADP antiporter activity	1.76E-03
32	GO:0030976: thiamine pyrophosphate binding	2.17E-03
33	GO:0000210: NAD+ diphosphatase activity	2.17E-03
34	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.50E-03
35	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.60E-03
36	GO:0005261: cation channel activity	2.60E-03
37	GO:0003978: UDP-glucose 4-epimerase activity	2.60E-03
38	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.60E-03
39	GO:0004144: diacylglycerol O-acyltransferase activity	2.60E-03
40	GO:0016831: carboxy-lyase activity	3.06E-03
41	GO:0043295: glutathione binding	3.06E-03
42	GO:0005507: copper ion binding	3.13E-03
43	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	3.55E-03
44	GO:0005544: calcium-dependent phospholipid binding	3.55E-03
45	GO:0004033: aldo-keto reductase (NADP) activity	3.55E-03
46	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.55E-03
47	GO:0008135: translation factor activity, RNA binding	4.06E-03
48	GO:0008142: oxysterol binding	4.06E-03
49	GO:0008271: secondary active sulfate transmembrane transporter activity	4.06E-03
50	GO:0050661: NADP binding	5.25E-03
51	GO:0043565: sequence-specific DNA binding	5.66E-03
52	GO:0004364: glutathione transferase activity	5.71E-03
53	GO:0008171: O-methyltransferase activity	5.74E-03
54	GO:0005545: 1-phosphatidylinositol binding	5.74E-03
55	GO:0015020: glucuronosyltransferase activity	5.74E-03
56	GO:0000287: magnesium ion binding	5.96E-03
57	GO:0008559: xenobiotic-transporting ATPase activity	6.34E-03
58	GO:0015116: sulfate transmembrane transporter activity	6.96E-03
59	GO:0005388: calcium-transporting ATPase activity	7.61E-03
60	GO:0005315: inorganic phosphate transmembrane transporter activity	7.61E-03
61	GO:0004497: monooxygenase activity	8.02E-03
62	GO:0005217: intracellular ligand-gated ion channel activity	8.97E-03
63	GO:0004970: ionotropic glutamate receptor activity	8.97E-03
64	GO:0004190: aspartic-type endopeptidase activity	8.97E-03
65	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.01E-02
66	GO:0001046: core promoter sequence-specific DNA binding	1.04E-02
67	GO:0004722: protein serine/threonine phosphatase activity	1.13E-02
68	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.16E-02
69	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.19E-02
70	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.27E-02
71	GO:0004674: protein serine/threonine kinase activity	1.38E-02
72	GO:0016758: transferase activity, transferring hexosyl groups	1.39E-02
73	GO:0030276: clathrin binding	1.69E-02
74	GO:0005199: structural constituent of cell wall	1.69E-02
75	GO:0015297: antiporter activity	1.89E-02
76	GO:0004197: cysteine-type endopeptidase activity	2.06E-02
77	GO:0005524: ATP binding	2.15E-02
78	GO:0016787: hydrolase activity	2.16E-02
79	GO:0004806: triglyceride lipase activity	2.87E-02
80	GO:0030247: polysaccharide binding	2.87E-02
81	GO:0004721: phosphoprotein phosphatase activity	2.87E-02
82	GO:0015238: drug transmembrane transporter activity	3.20E-02
83	GO:0004842: ubiquitin-protein transferase activity	3.23E-02
84	GO:0043531: ADP binding	3.36E-02
85	GO:0050897: cobalt ion binding	3.42E-02
86	GO:0004672: protein kinase activity	3.53E-02
87	GO:0050660: flavin adenine dinucleotide binding	3.55E-02
88	GO:0005516: calmodulin binding	4.49E-02
89	GO:0035091: phosphatidylinositol binding	4.62E-02
90	GO:0015293: symporter activity	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0000138: Golgi trans cisterna	2.00E-04
3	GO:0005901: caveola	4.48E-04
4	GO:0005886: plasma membrane	5.04E-04
5	GO:0016021: integral component of membrane	5.73E-04
6	GO:0008287: protein serine/threonine phosphatase complex	7.29E-04
7	GO:0009530: primary cell wall	7.29E-04
8	GO:0070062: extracellular exosome	1.04E-03
9	GO:0005887: integral component of plasma membrane	4.61E-03
10	GO:0005740: mitochondrial envelope	5.74E-03
11	GO:0005578: proteinaceous extracellular matrix	7.61E-03
12	GO:0031012: extracellular matrix	7.61E-03
13	GO:0005769: early endosome	9.68E-03
14	GO:0005905: clathrin-coated pit	1.19E-02
15	GO:0005743: mitochondrial inner membrane	1.20E-02
16	GO:0043231: intracellular membrane-bounded organelle	1.49E-02
17	GO:0030136: clathrin-coated vesicle	1.52E-02
18	GO:0005774: vacuolar membrane	1.82E-02
19	GO:0000145: exocyst	2.06E-02
20	GO:0032580: Golgi cisterna membrane	2.25E-02
21	GO:0005777: peroxisome	3.22E-02
22	GO:0000325: plant-type vacuole	3.42E-02
23	GO:0000786: nucleosome	3.54E-02
24	GO:0031969: chloroplast membrane	3.80E-02
25	GO:0009506: plasmodesma	4.78E-02
26	GO:0005802: trans-Golgi network	4.85E-02