co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G62480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0006216: cytidine catabolic process	0.00E+00
3	GO:0048034: heme O biosynthetic process	0.00E+00
4	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
5	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
6	GO:0006102: isocitrate metabolic process	1.21E-05
7	GO:0006099: tricarboxylic acid cycle	2.47E-05
8	GO:0042964: thioredoxin reduction	3.77E-05
9	GO:0015865: purine nucleotide transport	9.40E-05
10	GO:0031204: posttranslational protein targeting to membrane, translocation	9.40E-05
11	GO:0046939: nucleotide phosphorylation	9.40E-05
12	GO:0010272: response to silver ion	1.63E-04
13	GO:0006591: ornithine metabolic process	1.63E-04
14	GO:0055074: calcium ion homeostasis	1.63E-04
15	GO:0010150: leaf senescence	2.04E-04
16	GO:0046902: regulation of mitochondrial membrane permeability	2.40E-04
17	GO:0009615: response to virus	3.23E-04
18	GO:0045227: capsule polysaccharide biosynthetic process	3.24E-04
19	GO:0033358: UDP-L-arabinose biosynthetic process	3.24E-04
20	GO:0046283: anthocyanin-containing compound metabolic process	4.13E-04
21	GO:0006564: L-serine biosynthetic process	4.13E-04
22	GO:0009972: cytidine deamination	5.07E-04
23	GO:0006561: proline biosynthetic process	5.07E-04
24	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	5.07E-04
25	GO:0009082: branched-chain amino acid biosynthetic process	6.05E-04
26	GO:0009099: valine biosynthetic process	6.05E-04
27	GO:0042742: defense response to bacterium	6.63E-04
28	GO:1900056: negative regulation of leaf senescence	7.07E-04
29	GO:0071669: plant-type cell wall organization or biogenesis	7.07E-04
30	GO:0050829: defense response to Gram-negative bacterium	7.07E-04
31	GO:0031347: regulation of defense response	8.11E-04
32	GO:0019430: removal of superoxide radicals	9.23E-04
33	GO:0010120: camalexin biosynthetic process	9.23E-04
34	GO:0009097: isoleucine biosynthetic process	9.23E-04
35	GO:0010204: defense response signaling pathway, resistance gene-independent	9.23E-04
36	GO:0022900: electron transport chain	9.23E-04
37	GO:0007186: G-protein coupled receptor signaling pathway	9.23E-04
38	GO:0009821: alkaloid biosynthetic process	1.04E-03
39	GO:0006783: heme biosynthetic process	1.04E-03
40	GO:0009626: plant-type hypersensitive response	1.12E-03
41	GO:0009620: response to fungus	1.15E-03
42	GO:0009098: leucine biosynthetic process	1.15E-03
43	GO:0006032: chitin catabolic process	1.28E-03
44	GO:0043069: negative regulation of programmed cell death	1.28E-03
45	GO:0000272: polysaccharide catabolic process	1.40E-03
46	GO:0052544: defense response by callose deposition in cell wall	1.40E-03
47	GO:0009718: anthocyanin-containing compound biosynthetic process	1.67E-03
48	GO:0009225: nucleotide-sugar metabolic process	1.95E-03
49	GO:0010167: response to nitrate	1.95E-03
50	GO:0000162: tryptophan biosynthetic process	2.10E-03
51	GO:0005992: trehalose biosynthetic process	2.25E-03
52	GO:0045333: cellular respiration	2.25E-03
53	GO:0006874: cellular calcium ion homeostasis	2.40E-03
54	GO:0016998: cell wall macromolecule catabolic process	2.56E-03
55	GO:0006012: galactose metabolic process	2.89E-03
56	GO:0048544: recognition of pollen	3.76E-03
57	GO:0009851: auxin biosynthetic process	3.94E-03
58	GO:0010183: pollen tube guidance	3.94E-03
59	GO:0009630: gravitropism	4.32E-03
60	GO:0006464: cellular protein modification process	4.70E-03
61	GO:0010252: auxin homeostasis	4.70E-03
62	GO:0009627: systemic acquired resistance	5.73E-03
63	GO:0016049: cell growth	6.16E-03
64	GO:0009753: response to jasmonic acid	6.39E-03
65	GO:0046686: response to cadmium ion	6.74E-03
66	GO:0006499: N-terminal protein myristoylation	6.82E-03
67	GO:0009407: toxin catabolic process	6.82E-03
68	GO:0006839: mitochondrial transport	8.23E-03
69	GO:0051707: response to other organism	8.96E-03
70	GO:0009735: response to cytokinin	9.66E-03
71	GO:0009636: response to toxic substance	9.73E-03
72	GO:0009664: plant-type cell wall organization	1.05E-02
73	GO:0009846: pollen germination	1.05E-02
74	GO:0042538: hyperosmotic salinity response	1.05E-02
75	GO:0048316: seed development	1.27E-02
76	GO:0042545: cell wall modification	1.39E-02
77	GO:0009058: biosynthetic process	1.73E-02
78	GO:0042744: hydrogen peroxide catabolic process	1.82E-02
79	GO:0045490: pectin catabolic process	2.09E-02
80	GO:0006979: response to oxidative stress	2.17E-02
81	GO:0009739: response to gibberellin	2.26E-02
82	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.26E-02
83	GO:0009617: response to bacterium	2.37E-02
84	GO:0009723: response to ethylene	3.16E-02
85	GO:0080167: response to karrikin	3.32E-02
86	GO:0006952: defense response	3.35E-02
87	GO:0045454: cell redox homeostasis	3.78E-02
88	GO:0016042: lipid catabolic process	4.30E-02
89	GO:0009751: response to salicylic acid	4.34E-02
90	GO:0007165: signal transduction	4.46E-02
91	GO:0009793: embryo development ending in seed dormancy	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
2	GO:0008495: protoheme IX farnesyltransferase activity	0.00E+00
3	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
4	GO:0047844: deoxycytidine deaminase activity	0.00E+00
5	GO:0004449: isocitrate dehydrogenase (NAD+) activity	8.75E-07
6	GO:0047326: inositol tetrakisphosphate 5-kinase activity	3.77E-05
7	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	3.77E-05
8	GO:0048037: cofactor binding	3.77E-05
9	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	3.77E-05
10	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	3.77E-05
11	GO:0000824: inositol tetrakisphosphate 3-kinase activity	3.77E-05
12	GO:0033984: indole-3-glycerol-phosphate lyase activity	3.77E-05
13	GO:0004776: succinate-CoA ligase (GDP-forming) activity	9.40E-05
14	GO:0004775: succinate-CoA ligase (ADP-forming) activity	9.40E-05
15	GO:0052656: L-isoleucine transaminase activity	2.40E-04
16	GO:0052654: L-leucine transaminase activity	2.40E-04
17	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	2.40E-04
18	GO:0052655: L-valine transaminase activity	2.40E-04
19	GO:0019201: nucleotide kinase activity	2.40E-04
20	GO:0010279: indole-3-acetic acid amido synthetase activity	3.24E-04
21	GO:0004659: prenyltransferase activity	3.24E-04
22	GO:0050373: UDP-arabinose 4-epimerase activity	3.24E-04
23	GO:0004834: tryptophan synthase activity	3.24E-04
24	GO:0005086: ARF guanyl-nucleotide exchange factor activity	3.24E-04
25	GO:0004084: branched-chain-amino-acid transaminase activity	3.24E-04
26	GO:0004930: G-protein coupled receptor activity	3.24E-04
27	GO:0005471: ATP:ADP antiporter activity	4.13E-04
28	GO:0004017: adenylate kinase activity	6.05E-04
29	GO:0004602: glutathione peroxidase activity	6.05E-04
30	GO:0004126: cytidine deaminase activity	6.05E-04
31	GO:0003978: UDP-glucose 4-epimerase activity	6.05E-04
32	GO:0008121: ubiquinol-cytochrome-c reductase activity	7.07E-04
33	GO:0051287: NAD binding	8.11E-04
34	GO:0004311: farnesyltranstransferase activity	8.13E-04
35	GO:0016844: strictosidine synthase activity	1.15E-03
36	GO:0004568: chitinase activity	1.28E-03
37	GO:0008061: chitin binding	1.95E-03
38	GO:0004970: ionotropic glutamate receptor activity	1.95E-03
39	GO:0005217: intracellular ligand-gated ion channel activity	1.95E-03
40	GO:0000287: magnesium ion binding	3.21E-03
41	GO:0016788: hydrolase activity, acting on ester bonds	3.33E-03
42	GO:0043531: ADP binding	3.58E-03
43	GO:0005199: structural constituent of cell wall	3.58E-03
44	GO:0008080: N-acetyltransferase activity	3.58E-03
45	GO:0004791: thioredoxin-disulfide reductase activity	3.76E-03
46	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	6.38E-03
47	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	7.51E-03
48	GO:0004364: glutathione transferase activity	8.71E-03
49	GO:0045330: aspartyl esterase activity	1.19E-02
50	GO:0030599: pectinesterase activity	1.36E-02
51	GO:0051082: unfolded protein binding	1.42E-02
52	GO:0030246: carbohydrate binding	1.43E-02
53	GO:0008565: protein transporter activity	1.89E-02
54	GO:0046910: pectinesterase inhibitor activity	1.99E-02
55	GO:0003824: catalytic activity	2.36E-02
56	GO:0004601: peroxidase activity	2.85E-02
57	GO:0052689: carboxylic ester hydrolase activity	3.57E-02
58	GO:0042803: protein homodimerization activity	3.91E-02
59	GO:0005524: ATP binding	4.09E-02

Rank	GO Term	Adjusted P value
1	GO:0005784: Sec61 translocon complex	0.00E+00
2	GO:0031205: endoplasmic reticulum Sec complex	0.00E+00
3	GO:0009530: primary cell wall	1.63E-04
4	GO:0005750: mitochondrial respiratory chain complex III	1.81E-03
5	GO:0071944: cell periphery	4.51E-03
6	GO:0032580: Golgi cisterna membrane	4.70E-03
7	GO:0005788: endoplasmic reticulum lumen	5.52E-03
8	GO:0005743: mitochondrial inner membrane	5.54E-03
9	GO:0090406: pollen tube	8.96E-03
10	GO:0005759: mitochondrial matrix	1.95E-02
11	GO:0009505: plant-type cell wall	2.69E-02
12	GO:0005886: plasma membrane	2.96E-02
13	GO:0005773: vacuole	3.17E-02
14	GO:0016021: integral component of membrane	3.43E-02
15	GO:0005783: endoplasmic reticulum	4.44E-02
16	GO:0009507: chloroplast	4.99E-02