co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G61450

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006903: vesicle targeting	0.00E+00
2	GO:0006216: cytidine catabolic process	0.00E+00
3	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
4	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
5	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
6	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
7	GO:0010398: xylogalacturonan metabolic process	0.00E+00
8	GO:0072722: response to amitrole	0.00E+00
9	GO:0006102: isocitrate metabolic process	4.69E-06
10	GO:0006099: tricarboxylic acid cycle	5.56E-06
11	GO:0055114: oxidation-reduction process	1.39E-04
12	GO:0046686: response to cadmium ion	1.85E-04
13	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.43E-04
14	GO:0042964: thioredoxin reduction	2.43E-04
15	GO:0006680: glucosylceramide catabolic process	2.43E-04
16	GO:0006083: acetate metabolic process	2.43E-04
17	GO:0009805: coumarin biosynthetic process	5.39E-04
18	GO:0006672: ceramide metabolic process	5.39E-04
19	GO:0080026: response to indolebutyric acid	5.39E-04
20	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.39E-04
21	GO:0051252: regulation of RNA metabolic process	5.39E-04
22	GO:0015709: thiosulfate transport	5.39E-04
23	GO:0031204: posttranslational protein targeting to membrane, translocation	5.39E-04
24	GO:0071422: succinate transmembrane transport	5.39E-04
25	GO:0046939: nucleotide phosphorylation	5.39E-04
26	GO:0009407: toxin catabolic process	6.77E-04
27	GO:0010272: response to silver ion	8.75E-04
28	GO:0009062: fatty acid catabolic process	8.75E-04
29	GO:0006556: S-adenosylmethionine biosynthetic process	8.75E-04
30	GO:0061158: 3'-UTR-mediated mRNA destabilization	8.75E-04
31	GO:0070301: cellular response to hydrogen peroxide	1.25E-03
32	GO:0015729: oxaloacetate transport	1.25E-03
33	GO:0006612: protein targeting to membrane	1.25E-03
34	GO:0006893: Golgi to plasma membrane transport	1.25E-03
35	GO:0080024: indolebutyric acid metabolic process	1.25E-03
36	GO:0000187: activation of MAPK activity	1.25E-03
37	GO:0016998: cell wall macromolecule catabolic process	1.28E-03
38	GO:0015031: protein transport	1.38E-03
39	GO:1902584: positive regulation of response to water deprivation	1.67E-03
40	GO:1901002: positive regulation of response to salt stress	1.67E-03
41	GO:0010188: response to microbial phytotoxin	1.67E-03
42	GO:0045927: positive regulation of growth	2.13E-03
43	GO:0071423: malate transmembrane transport	2.13E-03
44	GO:0098719: sodium ion import across plasma membrane	2.13E-03
45	GO:0046283: anthocyanin-containing compound metabolic process	2.13E-03
46	GO:0006564: L-serine biosynthetic process	2.13E-03
47	GO:0006623: protein targeting to vacuole	2.40E-03
48	GO:0006555: methionine metabolic process	2.62E-03
49	GO:0060918: auxin transport	2.62E-03
50	GO:0035435: phosphate ion transmembrane transport	2.62E-03
51	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	2.62E-03
52	GO:0009972: cytidine deamination	2.62E-03
53	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.62E-03
54	GO:0016192: vesicle-mediated transport	2.67E-03
55	GO:0019509: L-methionine salvage from methylthioadenosine	3.15E-03
56	GO:0034389: lipid particle organization	3.15E-03
57	GO:0009082: branched-chain amino acid biosynthetic process	3.15E-03
58	GO:0009099: valine biosynthetic process	3.15E-03
59	GO:0080113: regulation of seed growth	3.15E-03
60	GO:0045454: cell redox homeostasis	3.25E-03
61	GO:0006886: intracellular protein transport	3.41E-03
62	GO:0051607: defense response to virus	3.50E-03
63	GO:0080186: developmental vegetative growth	3.72E-03
64	GO:0071669: plant-type cell wall organization or biogenesis	3.72E-03
65	GO:0008272: sulfate transport	3.72E-03
66	GO:0050829: defense response to Gram-negative bacterium	3.72E-03
67	GO:0009627: systemic acquired resistance	4.14E-03
68	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.31E-03
69	GO:0009819: drought recovery	4.31E-03
70	GO:0006888: ER to Golgi vesicle-mediated transport	4.37E-03
71	GO:0009699: phenylpropanoid biosynthetic process	4.93E-03
72	GO:0006002: fructose 6-phosphate metabolic process	4.93E-03
73	GO:0060321: acceptance of pollen	4.93E-03
74	GO:0019430: removal of superoxide radicals	4.93E-03
75	GO:0009657: plastid organization	4.93E-03
76	GO:0009097: isoleucine biosynthetic process	4.93E-03
77	GO:0010043: response to zinc ion	5.59E-03
78	GO:0043067: regulation of programmed cell death	6.27E-03
79	GO:0009098: leucine biosynthetic process	6.27E-03
80	GO:0048354: mucilage biosynthetic process involved in seed coat development	6.27E-03
81	GO:0051453: regulation of intracellular pH	6.27E-03
82	GO:0006032: chitin catabolic process	6.99E-03
83	GO:0009688: abscisic acid biosynthetic process	6.99E-03
84	GO:0043069: negative regulation of programmed cell death	6.99E-03
85	GO:0000272: polysaccharide catabolic process	7.73E-03
86	GO:0000209: protein polyubiquitination	8.22E-03
87	GO:0006790: sulfur compound metabolic process	8.49E-03
88	GO:0071365: cellular response to auxin stimulus	8.49E-03
89	GO:0050832: defense response to fungus	8.70E-03
90	GO:0009636: response to toxic substance	8.88E-03
91	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	9.29E-03
92	GO:0010102: lateral root morphogenesis	9.29E-03
93	GO:0055046: microgametogenesis	9.29E-03
94	GO:0031347: regulation of defense response	9.58E-03
95	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	9.58E-03
96	GO:0006979: response to oxidative stress	9.68E-03
97	GO:0009846: pollen germination	9.93E-03
98	GO:0009266: response to temperature stimulus	1.01E-02
99	GO:0007030: Golgi organization	1.10E-02
100	GO:0046854: phosphatidylinositol phosphorylation	1.10E-02
101	GO:0010053: root epidermal cell differentiation	1.10E-02
102	GO:0000162: tryptophan biosynthetic process	1.18E-02
103	GO:0034976: response to endoplasmic reticulum stress	1.18E-02
104	GO:0006874: cellular calcium ion homeostasis	1.37E-02
105	GO:0010073: meristem maintenance	1.37E-02
106	GO:0009620: response to fungus	1.39E-02
107	GO:0019915: lipid storage	1.46E-02
108	GO:0030245: cellulose catabolic process	1.56E-02
109	GO:0009814: defense response, incompatible interaction	1.56E-02
110	GO:0006730: one-carbon metabolic process	1.56E-02
111	GO:0030433: ubiquitin-dependent ERAD pathway	1.56E-02
112	GO:0019748: secondary metabolic process	1.56E-02
113	GO:0009693: ethylene biosynthetic process	1.66E-02
114	GO:0010227: floral organ abscission	1.66E-02
115	GO:0009561: megagametogenesis	1.76E-02
116	GO:0009306: protein secretion	1.76E-02
117	GO:0016117: carotenoid biosynthetic process	1.86E-02
118	GO:0009751: response to salicylic acid	1.86E-02
119	GO:0006629: lipid metabolic process	1.89E-02
120	GO:0042631: cellular response to water deprivation	1.97E-02
121	GO:0010051: xylem and phloem pattern formation	1.97E-02
122	GO:0045489: pectin biosynthetic process	2.07E-02
123	GO:0006662: glycerol ether metabolic process	2.07E-02
124	GO:0048544: recognition of pollen	2.18E-02
125	GO:0006814: sodium ion transport	2.18E-02
126	GO:0010183: pollen tube guidance	2.29E-02
127	GO:0009851: auxin biosynthetic process	2.29E-02
128	GO:0010193: response to ozone	2.41E-02
129	GO:0006635: fatty acid beta-oxidation	2.41E-02
130	GO:0030163: protein catabolic process	2.64E-02
131	GO:0071281: cellular response to iron ion	2.64E-02
132	GO:0045490: pectin catabolic process	2.64E-02
133	GO:1901657: glycosyl compound metabolic process	2.64E-02
134	GO:0019760: glucosinolate metabolic process	2.76E-02
135	GO:0006464: cellular protein modification process	2.76E-02
136	GO:0006904: vesicle docking involved in exocytosis	2.88E-02
137	GO:0071805: potassium ion transmembrane transport	2.88E-02
138	GO:0009651: response to salt stress	2.94E-02
139	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.95E-02
140	GO:0042742: defense response to bacterium	3.06E-02
141	GO:0009615: response to virus	3.13E-02
142	GO:0006974: cellular response to DNA damage stimulus	3.39E-02
143	GO:0016049: cell growth	3.65E-02
144	GO:0009817: defense response to fungus, incompatible interaction	3.78E-02
145	GO:0008219: cell death	3.78E-02
146	GO:0048767: root hair elongation	3.92E-02
147	GO:0006499: N-terminal protein myristoylation	4.05E-02
148	GO:0009631: cold acclimation	4.19E-02
149	GO:0009860: pollen tube growth	4.38E-02
150	GO:0045087: innate immune response	4.48E-02
151	GO:0034599: cellular response to oxidative stress	4.62E-02
152	GO:0006839: mitochondrial transport	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0070577: lysine-acetylated histone binding	0.00E+00
2	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
3	GO:0047844: deoxycytidine deaminase activity	0.00E+00
4	GO:0001729: ceramide kinase activity	0.00E+00
5	GO:0016504: peptidase activator activity	0.00E+00
6	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
7	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
8	GO:0004449: isocitrate dehydrogenase (NAD+) activity	8.40E-08
9	GO:0008320: protein transmembrane transporter activity	1.74E-04
10	GO:0043295: glutathione binding	1.74E-04
11	GO:0003987: acetate-CoA ligase activity	2.43E-04
12	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.43E-04
13	GO:0000824: inositol tetrakisphosphate 3-kinase activity	2.43E-04
14	GO:0070401: NADP+ binding	2.43E-04
15	GO:0047326: inositol tetrakisphosphate 5-kinase activity	2.43E-04
16	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	2.43E-04
17	GO:0048037: cofactor binding	2.43E-04
18	GO:0004348: glucosylceramidase activity	2.43E-04
19	GO:2001147: camalexin binding	2.43E-04
20	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.43E-04
21	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	2.43E-04
22	GO:0004649: poly(ADP-ribose) glycohydrolase activity	2.43E-04
23	GO:0016229: steroid dehydrogenase activity	2.43E-04
24	GO:0010179: IAA-Ala conjugate hydrolase activity	2.43E-04
25	GO:2001227: quercitrin binding	2.43E-04
26	GO:0008805: carbon-monoxide oxygenase activity	5.39E-04
27	GO:0004775: succinate-CoA ligase (ADP-forming) activity	5.39E-04
28	GO:0008428: ribonuclease inhibitor activity	5.39E-04
29	GO:1990585: hydroxyproline O-arabinosyltransferase activity	5.39E-04
30	GO:0015117: thiosulfate transmembrane transporter activity	5.39E-04
31	GO:1901677: phosphate transmembrane transporter activity	5.39E-04
32	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	5.39E-04
33	GO:0004776: succinate-CoA ligase (GDP-forming) activity	5.39E-04
34	GO:0052739: phosphatidylserine 1-acylhydrolase activity	5.39E-04
35	GO:0010297: heteropolysaccharide binding	5.39E-04
36	GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity	5.39E-04
37	GO:0004617: phosphoglycerate dehydrogenase activity	5.39E-04
38	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	8.75E-04
39	GO:0005310: dicarboxylic acid transmembrane transporter activity	8.75E-04
40	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	8.75E-04
41	GO:0015141: succinate transmembrane transporter activity	8.75E-04
42	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	8.75E-04
43	GO:0004478: methionine adenosyltransferase activity	8.75E-04
44	GO:0004364: glutathione transferase activity	1.05E-03
45	GO:0019201: nucleotide kinase activity	1.25E-03
46	GO:0015131: oxaloacetate transmembrane transporter activity	1.25E-03
47	GO:0004416: hydroxyacylglutathione hydrolase activity	1.25E-03
48	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.25E-03
49	GO:0052656: L-isoleucine transaminase activity	1.25E-03
50	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.25E-03
51	GO:0052654: L-leucine transaminase activity	1.25E-03
52	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	1.25E-03
53	GO:0017077: oxidative phosphorylation uncoupler activity	1.25E-03
54	GO:0052655: L-valine transaminase activity	1.25E-03
55	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.67E-03
56	GO:0005086: ARF guanyl-nucleotide exchange factor activity	1.67E-03
57	GO:0004084: branched-chain-amino-acid transaminase activity	1.67E-03
58	GO:0070628: proteasome binding	1.67E-03
59	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.67E-03
60	GO:0004031: aldehyde oxidase activity	1.67E-03
61	GO:0050302: indole-3-acetaldehyde oxidase activity	1.67E-03
62	GO:0009916: alternative oxidase activity	1.67E-03
63	GO:0008374: O-acyltransferase activity	2.13E-03
64	GO:0008948: oxaloacetate decarboxylase activity	2.13E-03
65	GO:0004791: thioredoxin-disulfide reductase activity	2.24E-03
66	GO:0015035: protein disulfide oxidoreductase activity	2.61E-03
67	GO:0016208: AMP binding	2.62E-03
68	GO:0035252: UDP-xylosyltransferase activity	2.62E-03
69	GO:0004126: cytidine deaminase activity	3.15E-03
70	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.15E-03
71	GO:0004017: adenylate kinase activity	3.15E-03
72	GO:0004602: glutathione peroxidase activity	3.15E-03
73	GO:0004656: procollagen-proline 4-dioxygenase activity	3.15E-03
74	GO:0003872: 6-phosphofructokinase activity	3.72E-03
75	GO:0015140: malate transmembrane transporter activity	3.72E-03
76	GO:0004033: aldo-keto reductase (NADP) activity	4.31E-03
77	GO:0004708: MAP kinase kinase activity	4.31E-03
78	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.31E-03
79	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	4.93E-03
80	GO:0003951: NAD+ kinase activity	4.93E-03
81	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	6.13E-03
82	GO:0004568: chitinase activity	6.99E-03
83	GO:0015386: potassium:proton antiporter activity	7.73E-03
84	GO:0008794: arsenate reductase (glutaredoxin) activity	7.73E-03
85	GO:0015116: sulfate transmembrane transporter activity	8.49E-03
86	GO:0051287: NAD binding	9.58E-03
87	GO:0031624: ubiquitin conjugating enzyme binding	1.01E-02
88	GO:0050660: flavin adenine dinucleotide binding	1.06E-02
89	GO:0008061: chitin binding	1.10E-02
90	GO:0005217: intracellular ligand-gated ion channel activity	1.10E-02
91	GO:0004970: ionotropic glutamate receptor activity	1.10E-02
92	GO:0004190: aspartic-type endopeptidase activity	1.10E-02
93	GO:0031625: ubiquitin protein ligase binding	1.18E-02
94	GO:0046872: metal ion binding	1.22E-02
95	GO:0061630: ubiquitin protein ligase activity	1.23E-02
96	GO:0031418: L-ascorbic acid binding	1.27E-02
97	GO:0008270: zinc ion binding	1.47E-02
98	GO:0008810: cellulase activity	1.66E-02
99	GO:0003756: protein disulfide isomerase activity	1.76E-02
100	GO:0003727: single-stranded RNA binding	1.76E-02
101	GO:0047134: protein-disulfide reductase activity	1.86E-02
102	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.96E-02
103	GO:0005524: ATP binding	2.02E-02
104	GO:0001085: RNA polymerase II transcription factor binding	2.07E-02
105	GO:0009055: electron carrier activity	2.07E-02
106	GO:0004527: exonuclease activity	2.07E-02
107	GO:0005199: structural constituent of cell wall	2.07E-02
108	GO:0010181: FMN binding	2.18E-02
109	GO:0004518: nuclease activity	2.52E-02
110	GO:0015385: sodium:proton antiporter activity	2.64E-02
111	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.64E-02
112	GO:0005509: calcium ion binding	2.72E-02
113	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.88E-02
114	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.88E-02
115	GO:0008237: metallopeptidase activity	2.88E-02
116	GO:0005506: iron ion binding	2.99E-02
117	GO:0016597: amino acid binding	3.01E-02
118	GO:0051213: dioxygenase activity	3.13E-02
119	GO:0016887: ATPase activity	3.27E-02
120	GO:0102483: scopolin beta-glucosidase activity	3.52E-02
121	GO:0004806: triglyceride lipase activity	3.52E-02
122	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.78E-02
123	GO:0004601: peroxidase activity	4.07E-02
124	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.19E-02
125	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.19E-02
126	GO:0043531: ADP binding	4.46E-02
127	GO:0003746: translation elongation factor activity	4.48E-02
128	GO:0003993: acid phosphatase activity	4.62E-02
129	GO:0008422: beta-glucosidase activity	4.76E-02
130	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0031205: endoplasmic reticulum Sec complex	0.00E+00
2	GO:0005784: Sec61 translocon complex	0.00E+00
3	GO:0046862: chromoplast membrane	0.00E+00
4	GO:0005794: Golgi apparatus	6.08E-05
5	GO:0005783: endoplasmic reticulum	6.56E-05
6	GO:0045252: oxoglutarate dehydrogenase complex	2.43E-04
7	GO:0005886: plasma membrane	3.61E-04
8	GO:0017119: Golgi transport complex	4.61E-04
9	GO:0030134: ER to Golgi transport vesicle	5.39E-04
10	GO:0005768: endosome	6.47E-04
11	GO:0005829: cytosol	7.02E-04
12	GO:0009530: primary cell wall	8.75E-04
13	GO:0005802: trans-Golgi network	1.78E-03
14	GO:0005945: 6-phosphofructokinase complex	2.13E-03
15	GO:0030127: COPII vesicle coat	2.62E-03
16	GO:0032580: Golgi cisterna membrane	3.11E-03
17	GO:0005801: cis-Golgi network	3.15E-03
18	GO:0030173: integral component of Golgi membrane	3.15E-03
19	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.72E-03
20	GO:0005788: endoplasmic reticulum lumen	3.92E-03
21	GO:0031982: vesicle	4.31E-03
22	GO:0009514: glyoxysome	4.93E-03
23	GO:0005811: lipid particle	4.93E-03
24	GO:0031901: early endosome membrane	5.59E-03
25	GO:0031090: organelle membrane	5.59E-03
26	GO:0030665: clathrin-coated vesicle membrane	6.27E-03
27	GO:0005789: endoplasmic reticulum membrane	6.52E-03
28	GO:0070469: respiratory chain	1.37E-02
29	GO:0005839: proteasome core complex	1.46E-02
30	GO:0019898: extrinsic component of membrane	2.29E-02
31	GO:0016592: mediator complex	2.52E-02
32	GO:0000145: exocyst	2.52E-02
33	GO:0071944: cell periphery	2.64E-02
34	GO:0016021: integral component of membrane	2.69E-02
35	GO:0005667: transcription factor complex	3.39E-02
36	GO:0000151: ubiquitin ligase complex	3.78E-02
37	GO:0000139: Golgi membrane	4.73E-02
38	GO:0005737: cytoplasm	4.86E-02