co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G61250

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
2	GO:0048034: heme O biosynthetic process	0.00E+00
3	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
4	GO:0042744: hydrogen peroxide catabolic process	2.90E-05
5	GO:0009821: alkaloid biosynthetic process	4.54E-05
6	GO:1901430: positive regulation of syringal lignin biosynthetic process	6.42E-05
7	GO:0033306: phytol metabolic process	6.42E-05
8	GO:0015865: purine nucleotide transport	1.55E-04
9	GO:1902000: homogentisate catabolic process	1.55E-04
10	GO:0043132: NAD transport	1.55E-04
11	GO:0046939: nucleotide phosphorylation	1.55E-04
12	GO:0010372: positive regulation of gibberellin biosynthetic process	1.55E-04
13	GO:0044375: regulation of peroxisome size	2.63E-04
14	GO:0009072: aromatic amino acid family metabolic process	2.63E-04
15	GO:0055074: calcium ion homeostasis	2.63E-04
16	GO:0009058: biosynthetic process	3.57E-04
17	GO:0046902: regulation of mitochondrial membrane permeability	3.82E-04
18	GO:0015858: nucleoside transport	3.82E-04
19	GO:1901657: glycosyl compound metabolic process	5.01E-04
20	GO:0010150: leaf senescence	5.04E-04
21	GO:0006878: cellular copper ion homeostasis	5.10E-04
22	GO:0009165: nucleotide biosynthetic process	5.10E-04
23	GO:0006536: glutamate metabolic process	5.10E-04
24	GO:0009615: response to virus	6.32E-04
25	GO:0006090: pyruvate metabolic process	6.45E-04
26	GO:0046283: anthocyanin-containing compound metabolic process	6.45E-04
27	GO:0006564: L-serine biosynthetic process	6.45E-04
28	GO:0030308: negative regulation of cell growth	6.45E-04
29	GO:0006561: proline biosynthetic process	7.90E-04
30	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	7.90E-04
31	GO:0009228: thiamine biosynthetic process	7.90E-04
32	GO:0046686: response to cadmium ion	8.13E-04
33	GO:0009407: toxin catabolic process	8.94E-04
34	GO:0045926: negative regulation of growth	9.40E-04
35	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	9.40E-04
36	GO:0009723: response to ethylene	1.04E-03
37	GO:0006099: tricarboxylic acid cycle	1.06E-03
38	GO:1900056: negative regulation of leaf senescence	1.10E-03
39	GO:0006839: mitochondrial transport	1.15E-03
40	GO:0006402: mRNA catabolic process	1.26E-03
41	GO:0006102: isocitrate metabolic process	1.26E-03
42	GO:0010120: camalexin biosynthetic process	1.44E-03
43	GO:0010204: defense response signaling pathway, resistance gene-independent	1.44E-03
44	GO:0007186: G-protein coupled receptor signaling pathway	1.44E-03
45	GO:0006783: heme biosynthetic process	1.62E-03
46	GO:0019432: triglyceride biosynthetic process	1.62E-03
47	GO:0042742: defense response to bacterium	1.89E-03
48	GO:0006979: response to oxidative stress	1.91E-03
49	GO:0043069: negative regulation of programmed cell death	2.01E-03
50	GO:0072593: reactive oxygen species metabolic process	2.21E-03
51	GO:0052544: defense response by callose deposition in cell wall	2.21E-03
52	GO:0009620: response to fungus	2.24E-03
53	GO:0002213: defense response to insect	2.42E-03
54	GO:0006108: malate metabolic process	2.64E-03
55	GO:0009718: anthocyanin-containing compound biosynthetic process	2.64E-03
56	GO:0006829: zinc II ion transport	2.64E-03
57	GO:0006807: nitrogen compound metabolic process	2.64E-03
58	GO:0034605: cellular response to heat	2.87E-03
59	GO:0010167: response to nitrate	3.09E-03
60	GO:0000162: tryptophan biosynthetic process	3.33E-03
61	GO:0009735: response to cytokinin	3.38E-03
62	GO:0005992: trehalose biosynthetic process	3.57E-03
63	GO:0009116: nucleoside metabolic process	3.57E-03
64	GO:0045333: cellular respiration	3.57E-03
65	GO:0006825: copper ion transport	3.82E-03
66	GO:0006874: cellular calcium ion homeostasis	3.82E-03
67	GO:0009306: protein secretion	4.87E-03
68	GO:0010089: xylem development	4.87E-03
69	GO:0055085: transmembrane transport	5.13E-03
70	GO:0051028: mRNA transport	5.15E-03
71	GO:0010118: stomatal movement	5.43E-03
72	GO:0009851: auxin biosynthetic process	6.31E-03
73	GO:0010183: pollen tube guidance	6.31E-03
74	GO:0006635: fatty acid beta-oxidation	6.61E-03
75	GO:0031047: gene silencing by RNA	6.92E-03
76	GO:0009630: gravitropism	6.92E-03
77	GO:0055114: oxidation-reduction process	8.95E-03
78	GO:0009813: flavonoid biosynthetic process	1.07E-02
79	GO:0006499: N-terminal protein myristoylation	1.10E-02
80	GO:0010119: regulation of stomatal movement	1.14E-02
81	GO:0007568: aging	1.14E-02
82	GO:0009751: response to salicylic acid	1.17E-02
83	GO:0015031: protein transport	1.26E-02
84	GO:0009753: response to jasmonic acid	1.27E-02
85	GO:0030001: metal ion transport	1.33E-02
86	GO:0009926: auxin polar transport	1.45E-02
87	GO:0009636: response to toxic substance	1.58E-02
88	GO:0006855: drug transmembrane transport	1.62E-02
89	GO:0031347: regulation of defense response	1.66E-02
90	GO:0009664: plant-type cell wall organization	1.71E-02
91	GO:0042538: hyperosmotic salinity response	1.71E-02
92	GO:0009809: lignin biosynthetic process	1.80E-02
93	GO:0006096: glycolytic process	2.02E-02
94	GO:0009416: response to light stimulus	2.11E-02
95	GO:0009626: plant-type hypersensitive response	2.12E-02
96	GO:0009611: response to wounding	2.16E-02
97	GO:0009624: response to nematode	2.31E-02
98	GO:0006952: defense response	2.51E-02
99	GO:0016310: phosphorylation	2.88E-02
100	GO:0050832: defense response to fungus	3.65E-02
101	GO:0009739: response to gibberellin	3.69E-02
102	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.69E-02
103	GO:0009826: unidimensional cell growth	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
2	GO:0016508: long-chain-enoyl-CoA hydratase activity	0.00E+00
3	GO:0044610: FMN transmembrane transporter activity	0.00E+00
4	GO:0008495: protoheme IX farnesyltransferase activity	0.00E+00
5	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
6	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
7	GO:0004601: peroxidase activity	5.89E-06
8	GO:0016844: strictosidine synthase activity	5.55E-05
9	GO:0047326: inositol tetrakisphosphate 5-kinase activity	6.42E-05
10	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	6.42E-05
11	GO:0048037: cofactor binding	6.42E-05
12	GO:0015230: FAD transmembrane transporter activity	6.42E-05
13	GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	6.42E-05
14	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	6.42E-05
15	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	6.42E-05
16	GO:0010013: N-1-naphthylphthalamic acid binding	6.42E-05
17	GO:0000824: inositol tetrakisphosphate 3-kinase activity	6.42E-05
18	GO:0033984: indole-3-glycerol-phosphate lyase activity	6.42E-05
19	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	6.42E-05
20	GO:0004364: glutathione transferase activity	9.31E-05
21	GO:0019172: glyoxalase III activity	1.55E-04
22	GO:0008517: folic acid transporter activity	1.55E-04
23	GO:0004776: succinate-CoA ligase (GDP-forming) activity	1.55E-04
24	GO:0015228: coenzyme A transmembrane transporter activity	1.55E-04
25	GO:0051724: NAD transporter activity	1.55E-04
26	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	1.55E-04
27	GO:0004775: succinate-CoA ligase (ADP-forming) activity	1.55E-04
28	GO:0019829: cation-transporting ATPase activity	2.63E-04
29	GO:0004165: dodecenoyl-CoA delta-isomerase activity	3.82E-04
30	GO:0004300: enoyl-CoA hydratase activity	3.82E-04
31	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	3.82E-04
32	GO:0004351: glutamate decarboxylase activity	3.82E-04
33	GO:0004749: ribose phosphate diphosphokinase activity	3.82E-04
34	GO:0019201: nucleotide kinase activity	3.82E-04
35	GO:0004449: isocitrate dehydrogenase (NAD+) activity	3.82E-04
36	GO:0004470: malic enzyme activity	5.10E-04
37	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	5.10E-04
38	GO:0004659: prenyltransferase activity	5.10E-04
39	GO:0004834: tryptophan synthase activity	5.10E-04
40	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	5.10E-04
41	GO:0004930: G-protein coupled receptor activity	5.10E-04
42	GO:0005496: steroid binding	6.45E-04
43	GO:0005471: ATP:ADP antiporter activity	6.45E-04
44	GO:0080122: AMP transmembrane transporter activity	6.45E-04
45	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	7.90E-04
46	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	7.90E-04
47	GO:0020037: heme binding	8.33E-04
48	GO:0000287: magnesium ion binding	8.49E-04
49	GO:0004017: adenylate kinase activity	9.40E-04
50	GO:0004144: diacylglycerol O-acyltransferase activity	9.40E-04
51	GO:0005347: ATP transmembrane transporter activity	9.40E-04
52	GO:0015217: ADP transmembrane transporter activity	9.40E-04
53	GO:0008422: beta-glucosidase activity	1.11E-03
54	GO:0005507: copper ion binding	1.11E-03
55	GO:0004311: farnesyltranstransferase activity	1.26E-03
56	GO:0005375: copper ion transmembrane transporter activity	1.44E-03
57	GO:0051287: NAD binding	1.56E-03
58	GO:0030955: potassium ion binding	1.81E-03
59	GO:0004743: pyruvate kinase activity	1.81E-03
60	GO:0004177: aminopeptidase activity	2.21E-03
61	GO:0008559: xenobiotic-transporting ATPase activity	2.21E-03
62	GO:0004521: endoribonuclease activity	2.42E-03
63	GO:0004022: alcohol dehydrogenase (NAD) activity	2.64E-03
64	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.64E-03
65	GO:0004970: ionotropic glutamate receptor activity	3.09E-03
66	GO:0005217: intracellular ligand-gated ion channel activity	3.09E-03
67	GO:0030170: pyridoxal phosphate binding	3.39E-03
68	GO:0005199: structural constituent of cell wall	5.72E-03
69	GO:0046873: metal ion transmembrane transporter activity	5.72E-03
70	GO:0016788: hydrolase activity, acting on ester bonds	6.60E-03
71	GO:0004518: nuclease activity	6.92E-03
72	GO:0052689: carboxylic ester hydrolase activity	8.88E-03
73	GO:0102483: scopolin beta-glucosidase activity	9.57E-03
74	GO:0050897: cobalt ion binding	1.14E-02
75	GO:0030145: manganese ion binding	1.14E-02
76	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.22E-02
77	GO:0005198: structural molecule activity	1.58E-02
78	GO:0005524: ATP binding	1.83E-02
79	GO:0045735: nutrient reservoir activity	2.02E-02
80	GO:0000166: nucleotide binding	2.11E-02
81	GO:0051082: unfolded protein binding	2.31E-02
82	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.79E-02
83	GO:0008565: protein transporter activity	3.08E-02
84	GO:0046872: metal ion binding	3.28E-02
85	GO:0015297: antiporter activity	3.30E-02
86	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.04E-02
87	GO:0003824: catalytic activity	4.68E-02
88	GO:0016301: kinase activity	4.85E-02
89	GO:0043531: ADP binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0009514: glyoxysome	3.64E-05
2	GO:0016442: RISC complex	6.42E-05
3	GO:0005773: vacuole	1.20E-04
4	GO:0005783: endoplasmic reticulum	2.55E-04
5	GO:0009530: primary cell wall	2.63E-04
6	GO:0046861: glyoxysomal membrane	2.63E-04
7	GO:0030139: endocytic vesicle	2.63E-04
8	GO:0032585: multivesicular body membrane	3.82E-04
9	GO:0005618: cell wall	1.09E-03
10	GO:0005779: integral component of peroxisomal membrane	1.44E-03
11	GO:0010494: cytoplasmic stress granule	1.62E-03
12	GO:0031901: early endosome membrane	1.62E-03
13	GO:0005743: mitochondrial inner membrane	1.68E-03
14	GO:0005635: nuclear envelope	1.85E-03
15	GO:0048471: perinuclear region of cytoplasm	2.21E-03
16	GO:0010287: plastoglobule	2.90E-03
17	GO:0005774: vacuolar membrane	3.27E-03
18	GO:0005769: early endosome	3.33E-03
19	GO:0005794: Golgi apparatus	7.40E-03
20	GO:0005778: peroxisomal membrane	7.88E-03
21	GO:0005886: plasma membrane	8.44E-03
22	GO:0000932: P-body	8.54E-03
23	GO:0005788: endoplasmic reticulum lumen	8.88E-03
24	GO:0005643: nuclear pore	1.03E-02
25	GO:0000325: plant-type vacuole	1.14E-02
26	GO:0031977: thylakoid lumen	1.37E-02
27	GO:0090406: pollen tube	1.45E-02
28	GO:0005829: cytosol	1.72E-02
29	GO:0000502: proteasome complex	1.80E-02
30	GO:0010008: endosome membrane	2.07E-02
31	GO:0005834: heterotrimeric G-protein complex	2.12E-02
32	GO:0005777: peroxisome	2.43E-02
33	GO:0009507: chloroplast	3.23E-02
34	GO:0009506: plasmodesma	3.29E-02
35	GO:0005576: extracellular region	3.84E-02
36	GO:0005768: endosome	3.85E-02
37	GO:0048046: apoplast	4.67E-02