Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G60900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010055: atrichoblast differentiation0.00E+00
2GO:1902001: fatty acid transmembrane transport0.00E+00
3GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
4GO:1900067: regulation of cellular response to alkaline pH0.00E+00
5GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
6GO:0015690: aluminum cation transport0.00E+00
7GO:0009312: oligosaccharide biosynthetic process0.00E+00
8GO:1900367: positive regulation of defense response to insect0.00E+00
9GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
10GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
11GO:0046865: terpenoid transport0.00E+00
12GO:0010324: membrane invagination0.00E+00
13GO:0071327: cellular response to trehalose stimulus0.00E+00
14GO:0051707: response to other organism9.90E-07
15GO:0071456: cellular response to hypoxia1.97E-06
16GO:0060548: negative regulation of cell death2.09E-06
17GO:0009751: response to salicylic acid4.79E-06
18GO:0010150: leaf senescence5.88E-06
19GO:0006952: defense response8.22E-06
20GO:0006979: response to oxidative stress8.98E-06
21GO:0010200: response to chitin8.98E-06
22GO:0042742: defense response to bacterium4.08E-05
23GO:0009625: response to insect5.38E-05
24GO:0010112: regulation of systemic acquired resistance6.47E-05
25GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.48E-05
26GO:0042391: regulation of membrane potential8.59E-05
27GO:0033358: UDP-L-arabinose biosynthetic process1.59E-04
28GO:0045227: capsule polysaccharide biosynthetic process1.59E-04
29GO:0009636: response to toxic substance1.82E-04
30GO:0006855: drug transmembrane transport1.96E-04
31GO:0009643: photosynthetic acclimation3.41E-04
32GO:0007166: cell surface receptor signaling pathway3.94E-04
33GO:0015760: glucose-6-phosphate transport5.43E-04
34GO:0046256: 2,4,6-trinitrotoluene catabolic process5.43E-04
35GO:0019567: arabinose biosynthetic process5.43E-04
36GO:0080173: male-female gamete recognition during double fertilization5.43E-04
37GO:0033306: phytol metabolic process5.43E-04
38GO:1901183: positive regulation of camalexin biosynthetic process5.43E-04
39GO:0009270: response to humidity5.43E-04
40GO:0009700: indole phytoalexin biosynthetic process5.43E-04
41GO:0050691: regulation of defense response to virus by host5.43E-04
42GO:0034214: protein hexamerization5.43E-04
43GO:0042759: long-chain fatty acid biosynthetic process5.43E-04
44GO:1990542: mitochondrial transmembrane transport5.43E-04
45GO:0031348: negative regulation of defense response5.43E-04
46GO:0032107: regulation of response to nutrient levels5.43E-04
47GO:1902600: hydrogen ion transmembrane transport5.43E-04
48GO:0048508: embryonic meristem development5.43E-04
49GO:1900056: negative regulation of leaf senescence5.81E-04
50GO:0006012: galactose metabolic process6.08E-04
51GO:0009867: jasmonic acid mediated signaling pathway6.17E-04
52GO:0009737: response to abscisic acid6.65E-04
53GO:0030091: protein repair7.24E-04
54GO:0009753: response to jasmonic acid8.07E-04
55GO:0010120: camalexin biosynthetic process8.82E-04
56GO:2000031: regulation of salicylic acid mediated signaling pathway8.82E-04
57GO:0006468: protein phosphorylation9.13E-04
58GO:0009646: response to absence of light9.97E-04
59GO:0006098: pentose-phosphate shunt1.05E-03
60GO:0010618: aerenchyma formation1.17E-03
61GO:0080181: lateral root branching1.17E-03
62GO:0055088: lipid homeostasis1.17E-03
63GO:0019521: D-gluconate metabolic process1.17E-03
64GO:0010115: regulation of abscisic acid biosynthetic process1.17E-03
65GO:0015908: fatty acid transport1.17E-03
66GO:0010271: regulation of chlorophyll catabolic process1.17E-03
67GO:0044419: interspecies interaction between organisms1.17E-03
68GO:0009945: radial axis specification1.17E-03
69GO:0019725: cellular homeostasis1.17E-03
70GO:0015712: hexose phosphate transport1.17E-03
71GO:0051258: protein polymerization1.17E-03
72GO:0071668: plant-type cell wall assembly1.17E-03
73GO:0015914: phospholipid transport1.17E-03
74GO:0006123: mitochondrial electron transport, cytochrome c to oxygen1.17E-03
75GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.17E-03
76GO:0009838: abscission1.17E-03
77GO:0010193: response to ozone1.19E-03
78GO:0031347: regulation of defense response1.21E-03
79GO:1900426: positive regulation of defense response to bacterium1.24E-03
80GO:0015692: lead ion transport1.92E-03
81GO:0015695: organic cation transport1.92E-03
82GO:0015714: phosphoenolpyruvate transport1.92E-03
83GO:0080168: abscisic acid transport1.92E-03
84GO:1900055: regulation of leaf senescence1.92E-03
85GO:0006954: inflammatory response1.92E-03
86GO:0034051: negative regulation of plant-type hypersensitive response1.92E-03
87GO:0010498: proteasomal protein catabolic process1.92E-03
88GO:1900140: regulation of seedling development1.92E-03
89GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.92E-03
90GO:0035436: triose phosphate transmembrane transport1.92E-03
91GO:0080163: regulation of protein serine/threonine phosphatase activity1.92E-03
92GO:0045793: positive regulation of cell size1.92E-03
93GO:0010186: positive regulation of cellular defense response1.92E-03
94GO:0009626: plant-type hypersensitive response2.04E-03
95GO:0009266: response to temperature stimulus2.46E-03
96GO:0009225: nucleotide-sugar metabolic process2.77E-03
97GO:0010731: protein glutathionylation2.78E-03
98GO:0015696: ammonium transport2.78E-03
99GO:0072583: clathrin-dependent endocytosis2.78E-03
100GO:0051289: protein homotetramerization2.78E-03
101GO:0046513: ceramide biosynthetic process2.78E-03
102GO:0046836: glycolipid transport2.78E-03
103GO:0010116: positive regulation of abscisic acid biosynthetic process2.78E-03
104GO:0048194: Golgi vesicle budding2.78E-03
105GO:0009407: toxin catabolic process3.03E-03
106GO:0080147: root hair cell development3.42E-03
107GO:2000377: regulation of reactive oxygen species metabolic process3.42E-03
108GO:0048638: regulation of developmental growth3.75E-03
109GO:0009652: thigmotropism3.75E-03
110GO:0072488: ammonium transmembrane transport3.75E-03
111GO:0015713: phosphoglycerate transport3.75E-03
112GO:0080142: regulation of salicylic acid biosynthetic process3.75E-03
113GO:1901141: regulation of lignin biosynthetic process3.75E-03
114GO:0010109: regulation of photosynthesis3.75E-03
115GO:0050832: defense response to fungus4.44E-03
116GO:2000022: regulation of jasmonic acid mediated signaling pathway4.56E-03
117GO:0010225: response to UV-C4.81E-03
118GO:0016094: polyprenol biosynthetic process4.81E-03
119GO:0009697: salicylic acid biosynthetic process4.81E-03
120GO:0034052: positive regulation of plant-type hypersensitive response4.81E-03
121GO:0033365: protein localization to organelle5.96E-03
122GO:0010337: regulation of salicylic acid metabolic process5.96E-03
123GO:0009117: nucleotide metabolic process5.96E-03
124GO:0006574: valine catabolic process5.96E-03
125GO:0018258: protein O-linked glycosylation via hydroxyproline5.96E-03
126GO:0002238: response to molecule of fungal origin5.96E-03
127GO:0009759: indole glucosinolate biosynthetic process5.96E-03
128GO:0010942: positive regulation of cell death5.96E-03
129GO:0010405: arabinogalactan protein metabolic process5.96E-03
130GO:0042372: phylloquinone biosynthetic process7.20E-03
131GO:0045926: negative regulation of growth7.20E-03
132GO:0009612: response to mechanical stimulus7.20E-03
133GO:0009942: longitudinal axis specification7.20E-03
134GO:0010310: regulation of hydrogen peroxide metabolic process7.20E-03
135GO:0006486: protein glycosylation7.34E-03
136GO:0009617: response to bacterium7.44E-03
137GO:0009611: response to wounding7.89E-03
138GO:0009749: response to glucose7.91E-03
139GO:0043090: amino acid import8.52E-03
140GO:0071446: cellular response to salicylic acid stimulus8.52E-03
141GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c8.52E-03
142GO:1900057: positive regulation of leaf senescence8.52E-03
143GO:0000122: negative regulation of transcription from RNA polymerase II promoter8.52E-03
144GO:0050829: defense response to Gram-negative bacterium8.52E-03
145GO:1902074: response to salt8.52E-03
146GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway8.52E-03
147GO:0009787: regulation of abscisic acid-activated signaling pathway9.92E-03
148GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline9.92E-03
149GO:0009819: drought recovery9.92E-03
150GO:0043068: positive regulation of programmed cell death9.92E-03
151GO:0031540: regulation of anthocyanin biosynthetic process9.92E-03
152GO:0006997: nucleus organization1.14E-02
153GO:0010204: defense response signaling pathway, resistance gene-independent1.14E-02
154GO:0010208: pollen wall assembly1.14E-02
155GO:0009624: response to nematode1.15E-02
156GO:0046916: cellular transition metal ion homeostasis1.30E-02
157GO:0019432: triglyceride biosynthetic process1.30E-02
158GO:0009627: systemic acquired resistance1.38E-02
159GO:0048354: mucilage biosynthetic process involved in seed coat development1.46E-02
160GO:0010380: regulation of chlorophyll biosynthetic process1.46E-02
161GO:0080167: response to karrikin1.53E-02
162GO:0051555: flavonol biosynthetic process1.63E-02
163GO:0009870: defense response signaling pathway, resistance gene-dependent1.63E-02
164GO:0019538: protein metabolic process1.63E-02
165GO:0006032: chitin catabolic process1.63E-02
166GO:0019684: photosynthesis, light reaction1.81E-02
167GO:0009089: lysine biosynthetic process via diaminopimelate1.81E-02
168GO:1903507: negative regulation of nucleic acid-templated transcription1.81E-02
169GO:0048229: gametophyte development1.81E-02
170GO:0009684: indoleacetic acid biosynthetic process1.81E-02
171GO:0048527: lateral root development1.87E-02
172GO:0009790: embryo development1.87E-02
173GO:0010119: regulation of stomatal movement1.87E-02
174GO:0007568: aging1.87E-02
175GO:0012501: programmed cell death1.99E-02
176GO:0002213: defense response to insect1.99E-02
177GO:0010105: negative regulation of ethylene-activated signaling pathway1.99E-02
178GO:0000266: mitochondrial fission1.99E-02
179GO:0006829: zinc II ion transport2.18E-02
180GO:0055046: microgametogenesis2.18E-02
181GO:0007165: signal transduction2.26E-02
182GO:0002237: response to molecule of bacterial origin2.37E-02
183GO:0046688: response to copper ion2.58E-02
184GO:0010167: response to nitrate2.58E-02
185GO:0006470: protein dephosphorylation2.73E-02
186GO:0000162: tryptophan biosynthetic process2.78E-02
187GO:0009863: salicylic acid mediated signaling pathway3.00E-02
188GO:0008152: metabolic process3.16E-02
189GO:0006825: copper ion transport3.22E-02
190GO:0006812: cation transport3.32E-02
191GO:0055085: transmembrane transport3.35E-02
192GO:0016998: cell wall macromolecule catabolic process3.44E-02
193GO:0006813: potassium ion transport3.56E-02
194GO:0010017: red or far-red light signaling pathway3.67E-02
195GO:0009561: megagametogenesis4.14E-02
196GO:0070417: cellular response to cold4.39E-02
197GO:0009620: response to fungus4.61E-02
198GO:0042631: cellular response to water deprivation4.63E-02
199GO:0000271: polysaccharide biosynthetic process4.63E-02
200GO:0000413: protein peptidyl-prolyl isomerization4.63E-02
201GO:0009723: response to ethylene4.75E-02
202GO:0006885: regulation of pH4.89E-02
203GO:0006520: cellular amino acid metabolic process4.89E-02
204GO:0045489: pectin biosynthetic process4.89E-02
RankGO TermAdjusted P value
1GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
2GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
3GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
4GO:0005212: structural constituent of eye lens0.00E+00
5GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
6GO:0003978: UDP-glucose 4-epimerase activity1.48E-05
7GO:0030553: cGMP binding1.60E-05
8GO:0030552: cAMP binding1.60E-05
9GO:0005216: ion channel activity3.10E-05
10GO:0030551: cyclic nucleotide binding8.59E-05
11GO:0005249: voltage-gated potassium channel activity8.59E-05
12GO:0016301: kinase activity1.55E-04
13GO:0050373: UDP-arabinose 4-epimerase activity1.59E-04
14GO:0033743: peptide-methionine (R)-S-oxide reductase activity4.54E-04
15GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.54E-04
16GO:0004012: phospholipid-translocating ATPase activity4.54E-04
17GO:0015238: drug transmembrane transporter activity4.60E-04
18GO:2001227: quercitrin binding5.43E-04
19GO:0019707: protein-cysteine S-acyltransferase activity5.43E-04
20GO:2001147: camalexin binding5.43E-04
21GO:0015245: fatty acid transporter activity5.43E-04
22GO:0010285: L,L-diaminopimelate aminotransferase activity5.43E-04
23GO:0032050: clathrin heavy chain binding5.43E-04
24GO:0043295: glutathione binding5.81E-04
25GO:0016758: transferase activity, transferring hexosyl groups7.22E-04
26GO:0047893: flavonol 3-O-glucosyltransferase activity7.24E-04
27GO:0004714: transmembrane receptor protein tyrosine kinase activity7.24E-04
28GO:0019901: protein kinase binding1.09E-03
29GO:0015152: glucose-6-phosphate transmembrane transporter activity1.17E-03
30GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.17E-03
31GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.17E-03
32GO:0001671: ATPase activator activity1.17E-03
33GO:0015036: disulfide oxidoreductase activity1.17E-03
34GO:0050736: O-malonyltransferase activity1.17E-03
35GO:0004385: guanylate kinase activity1.17E-03
36GO:0048531: beta-1,3-galactosyltransferase activity1.17E-03
37GO:0050291: sphingosine N-acyltransferase activity1.17E-03
38GO:0047364: desulfoglucosinolate sulfotransferase activity1.17E-03
39GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.18E-03
40GO:0015297: antiporter activity1.23E-03
41GO:0004568: chitinase activity1.45E-03
42GO:0008559: xenobiotic-transporting ATPase activity1.67E-03
43GO:0004674: protein serine/threonine kinase activity1.82E-03
44GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.92E-03
45GO:0004324: ferredoxin-NADP+ reductase activity1.92E-03
46GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.92E-03
47GO:0016531: copper chaperone activity1.92E-03
48GO:0032403: protein complex binding1.92E-03
49GO:0071917: triose-phosphate transmembrane transporter activity1.92E-03
50GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.18E-03
51GO:0017089: glycolipid transporter activity2.78E-03
52GO:0022890: inorganic cation transmembrane transporter activity2.78E-03
53GO:0017077: oxidative phosphorylation uncoupler activity2.78E-03
54GO:0005509: calcium ion binding3.42E-03
55GO:0015120: phosphoglycerate transmembrane transporter activity3.75E-03
56GO:0004834: tryptophan synthase activity3.75E-03
57GO:0004737: pyruvate decarboxylase activity3.75E-03
58GO:0051861: glycolipid binding3.75E-03
59GO:0035251: UDP-glucosyltransferase activity4.16E-03
60GO:0033612: receptor serine/threonine kinase binding4.16E-03
61GO:0004364: glutathione transferase activity4.75E-03
62GO:0002094: polyprenyltransferase activity4.81E-03
63GO:0005496: steroid binding4.81E-03
64GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.81E-03
65GO:0004499: N,N-dimethylaniline monooxygenase activity5.41E-03
66GO:1990714: hydroxyproline O-galactosyltransferase activity5.96E-03
67GO:0008519: ammonium transmembrane transporter activity5.96E-03
68GO:0030976: thiamine pyrophosphate binding5.96E-03
69GO:0008194: UDP-glycosyltransferase activity6.74E-03
70GO:0004144: diacylglycerol O-acyltransferase activity7.20E-03
71GO:0005261: cation channel activity7.20E-03
72GO:0004656: procollagen-proline 4-dioxygenase activity7.20E-03
73GO:0008113: peptide-methionine (S)-S-oxide reductase activity7.20E-03
74GO:0015299: solute:proton antiporter activity7.37E-03
75GO:0005524: ATP binding7.61E-03
76GO:0016831: carboxy-lyase activity8.52E-03
77GO:0102425: myricetin 3-O-glucosyltransferase activity8.52E-03
78GO:0102360: daphnetin 3-O-glucosyltransferase activity8.52E-03
79GO:0005544: calcium-dependent phospholipid binding9.92E-03
80GO:0004033: aldo-keto reductase (NADP) activity9.92E-03
81GO:0080044: quercetin 7-O-glucosyltransferase activity1.03E-02
82GO:0080043: quercetin 3-O-glucosyltransferase activity1.03E-02
83GO:0008483: transaminase activity1.09E-02
84GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.09E-02
85GO:0071949: FAD binding1.30E-02
86GO:0008375: acetylglucosaminyltransferase activity1.38E-02
87GO:0004806: triglyceride lipase activity1.45E-02
88GO:0047617: acyl-CoA hydrolase activity1.46E-02
89GO:0004497: monooxygenase activity1.53E-02
90GO:0015020: glucuronosyltransferase activity1.63E-02
91GO:0004864: protein phosphatase inhibitor activity1.63E-02
92GO:0008171: O-methyltransferase activity1.63E-02
93GO:0015386: potassium:proton antiporter activity1.81E-02
94GO:0008378: galactosyltransferase activity1.99E-02
95GO:0043565: sequence-specific DNA binding2.04E-02
96GO:0005315: inorganic phosphate transmembrane transporter activity2.18E-02
97GO:0004842: ubiquitin-protein transferase activity2.22E-02
98GO:0050661: NADP binding2.34E-02
99GO:0004672: protein kinase activity2.51E-02
100GO:0008146: sulfotransferase activity2.58E-02
101GO:0004190: aspartic-type endopeptidase activity2.58E-02
102GO:0003954: NADH dehydrogenase activity3.00E-02
103GO:0001046: core promoter sequence-specific DNA binding3.00E-02
104GO:0003714: transcription corepressor activity3.00E-02
105GO:0031418: L-ascorbic acid binding3.00E-02
106GO:0009055: electron carrier activity3.03E-02
107GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.12E-02
108GO:0016757: transferase activity, transferring glycosyl groups3.14E-02
109GO:0043424: protein histidine kinase binding3.22E-02
110GO:0015079: potassium ion transmembrane transporter activity3.22E-02
111GO:0008324: cation transmembrane transporter activity3.22E-02
112GO:0051087: chaperone binding3.22E-02
113GO:0004707: MAP kinase activity3.44E-02
114GO:0019706: protein-cysteine S-palmitoyltransferase activity3.44E-02
115GO:0005215: transporter activity3.51E-02
116GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.67E-02
117GO:0016298: lipase activity3.68E-02
118GO:0000287: magnesium ion binding3.89E-02
119GO:0005507: copper ion binding4.05E-02
120GO:0005516: calmodulin binding4.43E-02
121GO:0005451: monovalent cation:proton antiporter activity4.63E-02
122GO:0050660: flavin adenine dinucleotide binding4.75E-02
123GO:0005515: protein binding4.88E-02
124GO:0005199: structural constituent of cell wall4.89E-02
125GO:0046873: metal ion transmembrane transporter activity4.89E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0016021: integral component of membrane3.39E-09
3GO:0005886: plasma membrane1.10E-08
4GO:0000813: ESCRT I complex2.42E-04
5GO:0000164: protein phosphatase type 1 complex2.42E-04
6GO:0000138: Golgi trans cisterna5.43E-04
7GO:0005794: Golgi apparatus9.30E-04
8GO:0031304: intrinsic component of mitochondrial inner membrane1.17E-03
9GO:0005901: caveola1.17E-03
10GO:0031314: extrinsic component of mitochondrial inner membrane1.17E-03
11GO:0008287: protein serine/threonine phosphatase complex1.92E-03
12GO:0009530: primary cell wall1.92E-03
13GO:0070062: extracellular exosome2.78E-03
14GO:0005758: mitochondrial intermembrane space3.42E-03
15GO:0005802: trans-Golgi network6.80E-03
16GO:0005777: peroxisome9.90E-03
17GO:0032580: Golgi cisterna membrane1.03E-02
18GO:0005887: integral component of plasma membrane1.42E-02
19GO:0005774: vacuolar membrane1.53E-02
20GO:0030125: clathrin vesicle coat1.63E-02
21GO:0000325: plant-type vacuole1.87E-02
22GO:0031012: extracellular matrix2.18E-02
23GO:0005795: Golgi stack2.58E-02
24GO:0005789: endoplasmic reticulum membrane2.72E-02
25GO:0005769: early endosome2.78E-02
26GO:0043231: intracellular membrane-bounded organelle3.16E-02
27GO:0070469: respiratory chain3.22E-02
28GO:0005741: mitochondrial outer membrane3.44E-02
29GO:0009506: plasmodesma4.39E-02
30GO:0005770: late endosome4.89E-02
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Gene type



Gene DE type