co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G60850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045014: negative regulation of transcription by glucose	0.00E+00
2	GO:0080127: fruit septum development	0.00E+00
3	GO:0009686: gibberellin biosynthetic process	6.50E-05
4	GO:0045786: negative regulation of cell cycle	1.80E-04
5	GO:0010726: positive regulation of hydrogen peroxide metabolic process	1.80E-04
6	GO:0032958: inositol phosphate biosynthetic process	1.80E-04
7	GO:0009733: response to auxin	3.96E-04
8	GO:0061062: regulation of nematode larval development	4.05E-04
9	GO:0006863: purine nucleobase transport	6.38E-04
10	GO:0090506: axillary shoot meristem initiation	6.61E-04
11	GO:0048575: short-day photoperiodism, flowering	6.61E-04
12	GO:0010321: regulation of vegetative phase change	9.45E-04
13	GO:0006020: inositol metabolic process	9.45E-04
14	GO:0048366: leaf development	1.18E-03
15	GO:0042991: transcription factor import into nucleus	1.25E-03
16	GO:0045487: gibberellin catabolic process	1.59E-03
17	GO:0071554: cell wall organization or biogenesis	1.68E-03
18	GO:0045892: negative regulation of transcription, DNA-templated	1.72E-03
19	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	1.96E-03
20	GO:0010358: leaf shaping	1.96E-03
21	GO:0003006: developmental process involved in reproduction	1.96E-03
22	GO:0010942: positive regulation of cell death	1.96E-03
23	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.35E-03
24	GO:0007050: cell cycle arrest	2.77E-03
25	GO:0006351: transcription, DNA-templated	2.79E-03
26	GO:0048573: photoperiodism, flowering	2.84E-03
27	GO:0042255: ribosome assembly	3.21E-03
28	GO:0006353: DNA-templated transcription, termination	3.21E-03
29	GO:0006402: mRNA catabolic process	3.21E-03
30	GO:0009704: de-etiolation	3.21E-03
31	GO:0048507: meristem development	4.15E-03
32	GO:0048589: developmental growth	4.15E-03
33	GO:0009056: catabolic process	4.15E-03
34	GO:0009826: unidimensional cell growth	4.81E-03
35	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.18E-03
36	GO:0009641: shade avoidance	5.18E-03
37	GO:0006949: syncytium formation	5.18E-03
38	GO:0012501: programmed cell death	6.28E-03
39	GO:0010582: floral meristem determinacy	6.28E-03
40	GO:0010152: pollen maturation	6.28E-03
41	GO:0009664: plant-type cell wall organization	6.43E-03
42	GO:0010102: lateral root morphogenesis	6.86E-03
43	GO:2000028: regulation of photoperiodism, flowering	6.86E-03
44	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.92E-03
45	GO:0006302: double-strand break repair	7.46E-03
46	GO:0048467: gynoecium development	7.46E-03
47	GO:0010223: secondary shoot formation	7.46E-03
48	GO:0009887: animal organ morphogenesis	7.46E-03
49	GO:0009740: gibberellic acid mediated signaling pathway	9.25E-03
50	GO:0080147: root hair cell development	9.37E-03
51	GO:0019953: sexual reproduction	1.00E-02
52	GO:0016567: protein ubiquitination	1.06E-02
53	GO:0051321: meiotic cell cycle	1.07E-02
54	GO:0016114: terpenoid biosynthetic process	1.07E-02
55	GO:0048364: root development	1.15E-02
56	GO:0071215: cellular response to abscisic acid stimulus	1.22E-02
57	GO:0001944: vasculature development	1.22E-02
58	GO:0048443: stamen development	1.29E-02
59	GO:0010268: brassinosteroid homeostasis	1.52E-02
60	GO:0010182: sugar mediated signaling pathway	1.52E-02
61	GO:0009741: response to brassinosteroid	1.52E-02
62	GO:0007165: signal transduction	1.59E-02
63	GO:0071555: cell wall organization	1.60E-02
64	GO:0048825: cotyledon development	1.68E-02
65	GO:0002229: defense response to oomycetes	1.77E-02
66	GO:0016132: brassinosteroid biosynthetic process	1.77E-02
67	GO:0032502: developmental process	1.85E-02
68	GO:0009739: response to gibberellin	1.91E-02
69	GO:0030163: protein catabolic process	1.94E-02
70	GO:0006470: protein dephosphorylation	1.95E-02
71	GO:0009908: flower development	1.98E-02
72	GO:0016125: sterol metabolic process	2.03E-02
73	GO:0019760: glucosinolate metabolic process	2.03E-02
74	GO:0009828: plant-type cell wall loosening	2.03E-02
75	GO:0009416: response to light stimulus	2.25E-02
76	GO:0009817: defense response to fungus, incompatible interaction	2.77E-02
77	GO:0009723: response to ethylene	3.06E-02
78	GO:0048527: lateral root development	3.08E-02
79	GO:0009867: jasmonic acid mediated signaling pathway	3.28E-02
80	GO:0006839: mitochondrial transport	3.60E-02
81	GO:0006631: fatty acid metabolic process	3.71E-02
82	GO:0042546: cell wall biogenesis	4.04E-02
83	GO:0006355: regulation of transcription, DNA-templated	4.21E-02
84	GO:0016042: lipid catabolic process	4.68E-02
85	GO:0009736: cytokinin-activated signaling pathway	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0009899: ent-kaurene synthase activity	0.00E+00
2	GO:0000829: inositol heptakisphosphate kinase activity	1.80E-04
3	GO:0000828: inositol hexakisphosphate kinase activity	1.80E-04
4	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.80E-04
5	GO:0010012: steroid 22-alpha hydroxylase activity	1.80E-04
6	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	4.05E-04
7	GO:0017022: myosin binding	4.05E-04
8	GO:0045543: gibberellin 2-beta-dioxygenase activity	4.05E-04
9	GO:0010296: prenylcysteine methylesterase activity	4.05E-04
10	GO:0005345: purine nucleobase transmembrane transporter activity	7.77E-04
11	GO:0045544: gibberellin 20-oxidase activity	9.45E-04
12	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	9.45E-04
13	GO:0010011: auxin binding	1.25E-03
14	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.59E-03
15	GO:0004709: MAP kinase kinase kinase activity	1.96E-03
16	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	1.96E-03
17	GO:0030332: cyclin binding	1.96E-03
18	GO:0016413: O-acetyltransferase activity	2.29E-03
19	GO:0016832: aldehyde-lyase activity	2.35E-03
20	GO:0003725: double-stranded RNA binding	6.86E-03
21	GO:0003712: transcription cofactor activity	8.08E-03
22	GO:0004190: aspartic-type endopeptidase activity	8.08E-03
23	GO:0004672: protein kinase activity	8.71E-03
24	GO:0004871: signal transducer activity	8.84E-03
25	GO:0004722: protein serine/threonine phosphatase activity	9.37E-03
26	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.03E-02
27	GO:0010333: terpene synthase activity	1.07E-02
28	GO:0033612: receptor serine/threonine kinase binding	1.07E-02
29	GO:0008408: 3'-5' exonuclease activity	1.07E-02
30	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.27E-02
31	GO:0003727: single-stranded RNA binding	1.29E-02
32	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.40E-02
33	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	1.52E-02
34	GO:0005199: structural constituent of cell wall	1.52E-02
35	GO:0016853: isomerase activity	1.60E-02
36	GO:0004518: nuclease activity	1.85E-02
37	GO:0016759: cellulose synthase activity	2.03E-02
38	GO:0000287: magnesium ion binding	2.59E-02
39	GO:0008236: serine-type peptidase activity	2.68E-02
40	GO:0016788: hydrolase activity, acting on ester bonds	2.69E-02
41	GO:0043565: sequence-specific DNA binding	2.84E-02
42	GO:0005096: GTPase activator activity	2.87E-02
43	GO:0030145: manganese ion binding	3.08E-02
44	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.08E-02
45	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.50E-02
46	GO:0052689: carboxylic ester hydrolase activity	3.62E-02
47	GO:0042803: protein homodimerization activity	4.10E-02
48	GO:0043621: protein self-association	4.16E-02
49	GO:0003690: double-stranded DNA binding	4.98E-02
50	GO:0016298: lipase activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0000791: euchromatin	1.80E-04
3	GO:0030870: Mre11 complex	4.05E-04
4	GO:0009531: secondary cell wall	9.45E-04
5	GO:0000795: synaptonemal complex	1.59E-03
6	GO:0005875: microtubule associated complex	8.71E-03
7	GO:0009532: plastid stroma	1.07E-02
8	GO:0009504: cell plate	1.68E-02
9	GO:0000785: chromatin	1.85E-02
10	GO:0005634: nucleus	2.22E-02
11	GO:0030529: intracellular ribonucleoprotein complex	2.30E-02