GO Enrichment Analysis of Co-expressed Genes with
AT5G60720
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 2 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 3 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 4 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 5 | GO:0009773: photosynthetic electron transport in photosystem I | 4.19E-08 |
| 6 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.03E-05 |
| 7 | GO:0019544: arginine catabolic process to glutamate | 1.67E-05 |
| 8 | GO:0080093: regulation of photorespiration | 1.67E-05 |
| 9 | GO:0031998: regulation of fatty acid beta-oxidation | 1.67E-05 |
| 10 | GO:0071457: cellular response to ozone | 4.35E-05 |
| 11 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.17E-04 |
| 12 | GO:0071484: cellular response to light intensity | 1.17E-04 |
| 13 | GO:0071486: cellular response to high light intensity | 1.61E-04 |
| 14 | GO:0045727: positive regulation of translation | 1.61E-04 |
| 15 | GO:0015994: chlorophyll metabolic process | 1.61E-04 |
| 16 | GO:0010236: plastoquinone biosynthetic process | 2.09E-04 |
| 17 | GO:0006097: glyoxylate cycle | 2.09E-04 |
| 18 | GO:0071493: cellular response to UV-B | 2.09E-04 |
| 19 | GO:0006751: glutathione catabolic process | 2.59E-04 |
| 20 | GO:0042549: photosystem II stabilization | 2.59E-04 |
| 21 | GO:0009228: thiamine biosynthetic process | 2.59E-04 |
| 22 | GO:0010189: vitamin E biosynthetic process | 3.11E-04 |
| 23 | GO:0006096: glycolytic process | 3.97E-04 |
| 24 | GO:0030091: protein repair | 4.23E-04 |
| 25 | GO:0032544: plastid translation | 4.82E-04 |
| 26 | GO:0019430: removal of superoxide radicals | 4.82E-04 |
| 27 | GO:0006098: pentose-phosphate shunt | 5.42E-04 |
| 28 | GO:0000272: polysaccharide catabolic process | 7.34E-04 |
| 29 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.01E-04 |
| 30 | GO:0006108: malate metabolic process | 8.70E-04 |
| 31 | GO:0006094: gluconeogenesis | 8.70E-04 |
| 32 | GO:0009767: photosynthetic electron transport chain | 8.70E-04 |
| 33 | GO:0010207: photosystem II assembly | 9.39E-04 |
| 34 | GO:0010143: cutin biosynthetic process | 9.39E-04 |
| 35 | GO:0019253: reductive pentose-phosphate cycle | 9.39E-04 |
| 36 | GO:0042742: defense response to bacterium | 1.06E-03 |
| 37 | GO:0009658: chloroplast organization | 1.21E-03 |
| 38 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.23E-03 |
| 39 | GO:0009409: response to cold | 1.54E-03 |
| 40 | GO:0006810: transport | 1.70E-03 |
| 41 | GO:0000413: protein peptidyl-prolyl isomerization | 1.73E-03 |
| 42 | GO:0042631: cellular response to water deprivation | 1.73E-03 |
| 43 | GO:0042335: cuticle development | 1.73E-03 |
| 44 | GO:0071472: cellular response to salt stress | 1.82E-03 |
| 45 | GO:0046686: response to cadmium ion | 1.83E-03 |
| 46 | GO:0032259: methylation | 2.09E-03 |
| 47 | GO:0006974: cellular response to DNA damage stimulus | 2.88E-03 |
| 48 | GO:0018298: protein-chromophore linkage | 3.20E-03 |
| 49 | GO:0010218: response to far red light | 3.42E-03 |
| 50 | GO:0009735: response to cytokinin | 3.51E-03 |
| 51 | GO:0009637: response to blue light | 3.76E-03 |
| 52 | GO:0009853: photorespiration | 3.76E-03 |
| 53 | GO:0006099: tricarboxylic acid cycle | 3.87E-03 |
| 54 | GO:0010114: response to red light | 4.47E-03 |
| 55 | GO:0006855: drug transmembrane transport | 4.96E-03 |
| 56 | GO:0006364: rRNA processing | 5.48E-03 |
| 57 | GO:0006979: response to oxidative stress | 7.79E-03 |
| 58 | GO:0006633: fatty acid biosynthetic process | 9.58E-03 |
| 59 | GO:0007623: circadian rhythm | 1.02E-02 |
| 60 | GO:0010468: regulation of gene expression | 1.16E-02 |
| 61 | GO:0015979: photosynthesis | 1.78E-02 |
| 62 | GO:0055114: oxidation-reduction process | 2.39E-02 |
| 63 | GO:0009611: response to wounding | 3.27E-02 |
| 64 | GO:0045893: positive regulation of transcription, DNA-templated | 3.55E-02 |
| 65 | GO:0006457: protein folding | 3.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 2 | GO:0009374: biotin binding | 1.67E-05 |
| 3 | GO:0045157: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity | 1.67E-05 |
| 4 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.67E-05 |
| 5 | GO:0047746: chlorophyllase activity | 4.35E-05 |
| 6 | GO:0004618: phosphoglycerate kinase activity | 4.35E-05 |
| 7 | GO:0010297: heteropolysaccharide binding | 4.35E-05 |
| 8 | GO:0003839: gamma-glutamylcyclotransferase activity | 4.35E-05 |
| 9 | GO:0004324: ferredoxin-NADP+ reductase activity | 7.77E-05 |
| 10 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.61E-04 |
| 11 | GO:0008453: alanine-glyoxylate transaminase activity | 1.61E-04 |
| 12 | GO:0003989: acetyl-CoA carboxylase activity | 2.09E-04 |
| 13 | GO:0003959: NADPH dehydrogenase activity | 2.09E-04 |
| 14 | GO:0016615: malate dehydrogenase activity | 2.59E-04 |
| 15 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.59E-04 |
| 16 | GO:0004332: fructose-bisphosphate aldolase activity | 2.59E-04 |
| 17 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.59E-04 |
| 18 | GO:0004784: superoxide dismutase activity | 2.59E-04 |
| 19 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 3.11E-04 |
| 20 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.11E-04 |
| 21 | GO:0030060: L-malate dehydrogenase activity | 3.11E-04 |
| 22 | GO:0008266: poly(U) RNA binding | 9.39E-04 |
| 23 | GO:0031409: pigment binding | 1.08E-03 |
| 24 | GO:0008168: methyltransferase activity | 1.17E-03 |
| 25 | GO:0050662: coenzyme binding | 1.91E-03 |
| 26 | GO:0048038: quinone binding | 2.09E-03 |
| 27 | GO:0016791: phosphatase activity | 2.38E-03 |
| 28 | GO:0016168: chlorophyll binding | 2.78E-03 |
| 29 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 3.09E-03 |
| 30 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.71E-03 |
| 31 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.96E-03 |
| 32 | GO:0016746: transferase activity, transferring acyl groups | 7.13E-03 |
| 33 | GO:0019843: rRNA binding | 8.17E-03 |
| 34 | GO:0030170: pyridoxal phosphate binding | 8.79E-03 |
| 35 | GO:0016491: oxidoreductase activity | 1.02E-02 |
| 36 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.21E-02 |
| 37 | GO:0042802: identical protein binding | 1.21E-02 |
| 38 | GO:0016787: hydrolase activity | 1.66E-02 |
| 39 | GO:0042803: protein homodimerization activity | 1.91E-02 |
| 40 | GO:0009055: electron carrier activity | 2.25E-02 |
| 41 | GO:0005507: copper ion binding | 4.14E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.03E-16 |
| 3 | GO:0009941: chloroplast envelope | 2.40E-13 |
| 4 | GO:0009534: chloroplast thylakoid | 1.60E-09 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.67E-08 |
| 6 | GO:0009570: chloroplast stroma | 2.51E-08 |
| 7 | GO:0009579: thylakoid | 6.45E-08 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 1.78E-07 |
| 9 | GO:0010319: stromule | 1.37E-06 |
| 10 | GO:0009706: chloroplast inner membrane | 1.91E-05 |
| 11 | GO:0010287: plastoglobule | 2.51E-05 |
| 12 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 4.35E-05 |
| 13 | GO:0009317: acetyl-CoA carboxylase complex | 7.77E-05 |
| 14 | GO:0048046: apoplast | 1.49E-04 |
| 15 | GO:0031977: thylakoid lumen | 2.29E-04 |
| 16 | GO:0005777: peroxisome | 5.25E-04 |
| 17 | GO:0030076: light-harvesting complex | 1.01E-03 |
| 18 | GO:0042651: thylakoid membrane | 1.23E-03 |
| 19 | GO:0009522: photosystem I | 1.91E-03 |
| 20 | GO:0016020: membrane | 5.43E-03 |
| 21 | GO:0005840: ribosome | 8.10E-03 |
| 22 | GO:0009543: chloroplast thylakoid lumen | 8.17E-03 |
| 23 | GO:0005773: vacuole | 8.65E-03 |
| 24 | GO:0009536: plastid | 9.49E-03 |