GO Enrichment Analysis of Co-expressed Genes with
AT5G59250
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015717: triose phosphate transport | 0.00E+00 |
| 2 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.26E-07 |
| 3 | GO:0006000: fructose metabolic process | 8.71E-07 |
| 4 | GO:0015995: chlorophyll biosynthetic process | 8.85E-07 |
| 5 | GO:0009772: photosynthetic electron transport in photosystem II | 2.06E-05 |
| 6 | GO:0006002: fructose 6-phosphate metabolic process | 3.49E-05 |
| 7 | GO:0009631: cold acclimation | 5.58E-05 |
| 8 | GO:0071588: hydrogen peroxide mediated signaling pathway | 6.26E-05 |
| 9 | GO:0009735: response to cytokinin | 7.04E-05 |
| 10 | GO:0009773: photosynthetic electron transport in photosystem I | 7.62E-05 |
| 11 | GO:0005983: starch catabolic process | 8.91E-05 |
| 12 | GO:0006094: gluconeogenesis | 1.03E-04 |
| 13 | GO:0005986: sucrose biosynthetic process | 1.03E-04 |
| 14 | GO:0010115: regulation of abscisic acid biosynthetic process | 1.52E-04 |
| 15 | GO:0010353: response to trehalose | 1.52E-04 |
| 16 | GO:0061077: chaperone-mediated protein folding | 2.08E-04 |
| 17 | GO:0006518: peptide metabolic process | 2.57E-04 |
| 18 | GO:0035436: triose phosphate transmembrane transport | 2.57E-04 |
| 19 | GO:0071484: cellular response to light intensity | 3.73E-04 |
| 20 | GO:0000302: response to reactive oxygen species | 4.27E-04 |
| 21 | GO:0006412: translation | 4.64E-04 |
| 22 | GO:0015713: phosphoglycerate transport | 4.99E-04 |
| 23 | GO:0010021: amylopectin biosynthetic process | 4.99E-04 |
| 24 | GO:0006461: protein complex assembly | 6.32E-04 |
| 25 | GO:0009643: photosynthetic acclimation | 7.73E-04 |
| 26 | GO:0042254: ribosome biogenesis | 8.54E-04 |
| 27 | GO:0009854: oxidative photosynthetic carbon pathway | 9.20E-04 |
| 28 | GO:0010019: chloroplast-nucleus signaling pathway | 9.20E-04 |
| 29 | GO:0034599: cellular response to oxidative stress | 1.03E-03 |
| 30 | GO:0009610: response to symbiotic fungus | 1.07E-03 |
| 31 | GO:0055114: oxidation-reduction process | 1.10E-03 |
| 32 | GO:0030091: protein repair | 1.24E-03 |
| 33 | GO:0015979: photosynthesis | 1.28E-03 |
| 34 | GO:0009657: plastid organization | 1.41E-03 |
| 35 | GO:0032544: plastid translation | 1.41E-03 |
| 36 | GO:0010206: photosystem II repair | 1.58E-03 |
| 37 | GO:0006783: heme biosynthetic process | 1.58E-03 |
| 38 | GO:0006754: ATP biosynthetic process | 1.58E-03 |
| 39 | GO:0010205: photoinhibition | 1.77E-03 |
| 40 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.96E-03 |
| 41 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.17E-03 |
| 42 | GO:0009750: response to fructose | 2.17E-03 |
| 43 | GO:0019253: reductive pentose-phosphate cycle | 2.80E-03 |
| 44 | GO:0010207: photosystem II assembly | 2.80E-03 |
| 45 | GO:0010143: cutin biosynthetic process | 2.80E-03 |
| 46 | GO:0005985: sucrose metabolic process | 3.03E-03 |
| 47 | GO:0071732: cellular response to nitric oxide | 3.03E-03 |
| 48 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.26E-03 |
| 49 | GO:0042744: hydrogen peroxide catabolic process | 3.36E-03 |
| 50 | GO:0000027: ribosomal large subunit assembly | 3.49E-03 |
| 51 | GO:0051017: actin filament bundle assembly | 3.49E-03 |
| 52 | GO:0043622: cortical microtubule organization | 3.74E-03 |
| 53 | GO:0071369: cellular response to ethylene stimulus | 4.50E-03 |
| 54 | GO:0006012: galactose metabolic process | 4.50E-03 |
| 55 | GO:0070417: cellular response to cold | 5.03E-03 |
| 56 | GO:0000413: protein peptidyl-prolyl isomerization | 5.31E-03 |
| 57 | GO:0015986: ATP synthesis coupled proton transport | 5.88E-03 |
| 58 | GO:0019252: starch biosynthetic process | 6.17E-03 |
| 59 | GO:0071281: cellular response to iron ion | 7.07E-03 |
| 60 | GO:0016311: dephosphorylation | 9.70E-03 |
| 61 | GO:0007568: aging | 1.11E-02 |
| 62 | GO:0006629: lipid metabolic process | 1.15E-02 |
| 63 | GO:0009853: photorespiration | 1.19E-02 |
| 64 | GO:0009409: response to cold | 1.31E-02 |
| 65 | GO:0006810: transport | 1.45E-02 |
| 66 | GO:0006633: fatty acid biosynthetic process | 3.11E-02 |
| 67 | GO:0042742: defense response to bacterium | 4.13E-02 |
| 68 | GO:0006979: response to oxidative stress | 4.16E-02 |
| 69 | GO:0006970: response to osmotic stress | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 2 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 3 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 4 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 5 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 6 | GO:0005528: FK506 binding | 3.06E-08 |
| 7 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.06E-07 |
| 8 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.26E-07 |
| 9 | GO:0019843: rRNA binding | 7.50E-07 |
| 10 | GO:0004130: cytochrome-c peroxidase activity | 1.04E-05 |
| 11 | GO:0003735: structural constituent of ribosome | 3.89E-05 |
| 12 | GO:0004853: uroporphyrinogen decarboxylase activity | 6.26E-05 |
| 13 | GO:0045485: omega-6 fatty acid desaturase activity | 6.26E-05 |
| 14 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 6.26E-05 |
| 15 | GO:0050521: alpha-glucan, water dikinase activity | 6.26E-05 |
| 16 | GO:0008967: phosphoglycolate phosphatase activity | 1.52E-04 |
| 17 | GO:0018708: thiol S-methyltransferase activity | 1.52E-04 |
| 18 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.52E-04 |
| 19 | GO:0033201: alpha-1,4-glucan synthase activity | 1.52E-04 |
| 20 | GO:0004373: glycogen (starch) synthase activity | 2.57E-04 |
| 21 | GO:0070402: NADPH binding | 2.57E-04 |
| 22 | GO:0071917: triose-phosphate transmembrane transporter activity | 2.57E-04 |
| 23 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 2.57E-04 |
| 24 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 2.57E-04 |
| 25 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 2.57E-04 |
| 26 | GO:0019201: nucleotide kinase activity | 3.73E-04 |
| 27 | GO:0009011: starch synthase activity | 4.99E-04 |
| 28 | GO:0015120: phosphoglycerate transmembrane transporter activity | 4.99E-04 |
| 29 | GO:0016688: L-ascorbate peroxidase activity | 7.73E-04 |
| 30 | GO:0004709: MAP kinase kinase kinase activity | 7.73E-04 |
| 31 | GO:0004017: adenylate kinase activity | 9.20E-04 |
| 32 | GO:0051920: peroxiredoxin activity | 9.20E-04 |
| 33 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 9.20E-04 |
| 34 | GO:0004033: aldo-keto reductase (NADP) activity | 1.24E-03 |
| 35 | GO:0016209: antioxidant activity | 1.24E-03 |
| 36 | GO:0004034: aldose 1-epimerase activity | 1.24E-03 |
| 37 | GO:0047617: acyl-CoA hydrolase activity | 1.77E-03 |
| 38 | GO:0030234: enzyme regulator activity | 1.96E-03 |
| 39 | GO:0044183: protein binding involved in protein folding | 2.17E-03 |
| 40 | GO:0047372: acylglycerol lipase activity | 2.17E-03 |
| 41 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 5.59E-03 |
| 42 | GO:0016853: isomerase activity | 5.88E-03 |
| 43 | GO:0004601: peroxidase activity | 6.27E-03 |
| 44 | GO:0048038: quinone binding | 6.46E-03 |
| 45 | GO:0051015: actin filament binding | 7.07E-03 |
| 46 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 7.70E-03 |
| 47 | GO:0004222: metalloendopeptidase activity | 1.08E-02 |
| 48 | GO:0016491: oxidoreductase activity | 1.26E-02 |
| 49 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.50E-02 |
| 50 | GO:0016787: hydrolase activity | 2.33E-02 |
| 51 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.70E-02 |
| 52 | GO:0015297: antiporter activity | 3.22E-02 |
| 53 | GO:0008168: methyltransferase activity | 4.42E-02 |
| 54 | GO:0016788: hydrolase activity, acting on ester bonds | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.11E-33 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 2.34E-26 |
| 3 | GO:0009534: chloroplast thylakoid | 1.98E-25 |
| 4 | GO:0009941: chloroplast envelope | 7.81E-23 |
| 5 | GO:0009570: chloroplast stroma | 1.51E-18 |
| 6 | GO:0009579: thylakoid | 5.77E-17 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.09E-13 |
| 8 | GO:0031977: thylakoid lumen | 1.07E-11 |
| 9 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.35E-05 |
| 10 | GO:0005840: ribosome | 5.54E-05 |
| 11 | GO:0030095: chloroplast photosystem II | 1.18E-04 |
| 12 | GO:0031357: integral component of chloroplast inner membrane | 1.52E-04 |
| 13 | GO:0009706: chloroplast inner membrane | 2.36E-04 |
| 14 | GO:0009544: chloroplast ATP synthase complex | 4.99E-04 |
| 15 | GO:0010319: stromule | 5.47E-04 |
| 16 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 7.73E-04 |
| 17 | GO:0009533: chloroplast stromal thylakoid | 1.07E-03 |
| 18 | GO:0031969: chloroplast membrane | 1.08E-03 |
| 19 | GO:0009501: amyloplast | 1.24E-03 |
| 20 | GO:0042651: thylakoid membrane | 3.74E-03 |
| 21 | GO:0015935: small ribosomal subunit | 3.98E-03 |
| 22 | GO:0015629: actin cytoskeleton | 4.50E-03 |
| 23 | GO:0009523: photosystem II | 6.17E-03 |
| 24 | GO:0022625: cytosolic large ribosomal subunit | 8.18E-03 |
| 25 | GO:0009707: chloroplast outer membrane | 1.01E-02 |
| 26 | GO:0015934: large ribosomal subunit | 1.11E-02 |
| 27 | GO:0048046: apoplast | 1.27E-02 |
| 28 | GO:0005856: cytoskeleton | 1.54E-02 |
| 29 | GO:0022626: cytosolic ribosome | 1.96E-02 |
| 30 | GO:0010287: plastoglobule | 2.55E-02 |