GO Enrichment Analysis of Co-expressed Genes with
AT5G59220
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071076: RNA 3' uridylation | 4.26E-06 |
| 2 | GO:0009156: ribonucleoside monophosphate biosynthetic process | 1.18E-05 |
| 3 | GO:0006597: spermine biosynthetic process | 1.18E-05 |
| 4 | GO:0034470: ncRNA processing | 1.18E-05 |
| 5 | GO:0060964: regulation of gene silencing by miRNA | 3.41E-05 |
| 6 | GO:0009165: nucleotide biosynthetic process | 4.83E-05 |
| 7 | GO:0006596: polyamine biosynthetic process | 8.11E-05 |
| 8 | GO:0042176: regulation of protein catabolic process | 8.11E-05 |
| 9 | GO:0006401: RNA catabolic process | 1.19E-04 |
| 10 | GO:0030968: endoplasmic reticulum unfolded protein response | 1.60E-04 |
| 11 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 1.83E-04 |
| 12 | GO:0005992: trehalose biosynthetic process | 4.07E-04 |
| 13 | GO:0009116: nucleoside metabolic process | 4.07E-04 |
| 14 | GO:0030433: ubiquitin-dependent ERAD pathway | 4.91E-04 |
| 15 | GO:0030163: protein catabolic process | 7.94E-04 |
| 16 | GO:0000209: protein polyubiquitination | 1.55E-03 |
| 17 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.71E-03 |
| 18 | GO:0009058: biosynthetic process | 2.80E-03 |
| 19 | GO:0009790: embryo development | 3.00E-03 |
| 20 | GO:0042254: ribosome biogenesis | 4.58E-03 |
| 21 | GO:0016042: lipid catabolic process | 6.71E-03 |
| 22 | GO:0006629: lipid metabolic process | 6.85E-03 |
| 23 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.27E-02 |
| 24 | GO:0071555: cell wall organization | 1.69E-02 |
| 25 | GO:0042742: defense response to bacterium | 1.69E-02 |
| 26 | GO:0005975: carbohydrate metabolic process | 2.27E-02 |
| 27 | GO:0016310: phosphorylation | 3.20E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016768: spermine synthase activity | 4.26E-06 |
| 2 | GO:0050265: RNA uridylyltransferase activity | 4.26E-06 |
| 3 | GO:1990381: ubiquitin-specific protease binding | 4.26E-06 |
| 4 | GO:0004766: spermidine synthase activity | 1.18E-05 |
| 5 | GO:0004749: ribose phosphate diphosphokinase activity | 3.41E-05 |
| 6 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 4.83E-05 |
| 7 | GO:0047714: galactolipase activity | 8.11E-05 |
| 8 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 1.60E-04 |
| 9 | GO:0004805: trehalose-phosphatase activity | 2.29E-04 |
| 10 | GO:0030234: enzyme regulator activity | 2.29E-04 |
| 11 | GO:0016779: nucleotidyltransferase activity | 4.91E-04 |
| 12 | GO:0004518: nuclease activity | 7.62E-04 |
| 13 | GO:0004806: triglyceride lipase activity | 1.03E-03 |
| 14 | GO:0004650: polygalacturonase activity | 2.19E-03 |
| 15 | GO:0051082: unfolded protein binding | 2.32E-03 |
| 16 | GO:0016829: lyase activity | 2.85E-03 |
| 17 | GO:0000287: magnesium ion binding | 4.46E-03 |
| 18 | GO:0016740: transferase activity | 1.18E-02 |
| 19 | GO:0003729: mRNA binding | 2.24E-02 |
| 20 | GO:0016787: hydrolase activity | 2.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000836: Hrd1p ubiquitin ligase complex | 4.26E-06 |
| 2 | GO:0044322: endoplasmic reticulum quality control compartment | 4.26E-06 |
| 3 | GO:0036513: Derlin-1 retrotranslocation complex | 3.41E-05 |
| 4 | GO:0008540: proteasome regulatory particle, base subcomplex | 2.05E-04 |
| 5 | GO:0030529: intracellular ribonucleoprotein complex | 9.24E-04 |
| 6 | GO:0000932: P-body | 9.24E-04 |
| 7 | GO:0000502: proteasome complex | 1.83E-03 |
| 8 | GO:0005654: nucleoplasm | 2.65E-03 |
| 9 | GO:0009507: chloroplast | 2.06E-02 |
| 10 | GO:0005730: nucleolus | 2.45E-02 |
| 11 | GO:0005618: cell wall | 4.51E-02 |