co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G59140

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
2	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
3	GO:0001881: receptor recycling	0.00E+00
4	GO:0006592: ornithine biosynthetic process	0.00E+00
5	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
6	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
7	GO:0019428: allantoin biosynthetic process	0.00E+00
8	GO:0015937: coenzyme A biosynthetic process	4.42E-06
9	GO:0006144: purine nucleobase metabolic process	2.41E-05
10	GO:0001560: regulation of cell growth by extracellular stimulus	2.41E-05
11	GO:0019628: urate catabolic process	2.41E-05
12	GO:0071452: cellular response to singlet oxygen	6.16E-05
13	GO:0006695: cholesterol biosynthetic process	6.16E-05
14	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	6.16E-05
15	GO:0080026: response to indolebutyric acid	6.16E-05
16	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.09E-04
17	GO:0046168: glycerol-3-phosphate catabolic process	1.09E-04
18	GO:0008333: endosome to lysosome transport	1.09E-04
19	GO:0051289: protein homotetramerization	1.62E-04
20	GO:0080024: indolebutyric acid metabolic process	1.62E-04
21	GO:0006383: transcription from RNA polymerase III promoter	1.62E-04
22	GO:0006072: glycerol-3-phosphate metabolic process	1.62E-04
23	GO:0009627: systemic acquired resistance	2.04E-04
24	GO:0061088: regulation of sequestering of zinc ion	2.21E-04
25	GO:0010483: pollen tube reception	2.21E-04
26	GO:0018279: protein N-linked glycosylation via asparagine	2.84E-04
27	GO:1902183: regulation of shoot apical meristem development	2.84E-04
28	GO:0010189: vitamin E biosynthetic process	4.20E-04
29	GO:0006526: arginine biosynthetic process	6.45E-04
30	GO:0007389: pattern specification process	6.45E-04
31	GO:0001510: RNA methylation	6.45E-04
32	GO:0015780: nucleotide-sugar transport	7.25E-04
33	GO:0048829: root cap development	8.92E-04
34	GO:0007034: vacuolar transport	1.25E-03
35	GO:0000162: tryptophan biosynthetic process	1.45E-03
36	GO:0006487: protein N-linked glycosylation	1.55E-03
37	GO:0010584: pollen exine formation	2.10E-03
38	GO:0042147: retrograde transport, endosome to Golgi	2.21E-03
39	GO:0006623: protein targeting to vacuole	2.70E-03
40	GO:0016132: brassinosteroid biosynthetic process	2.82E-03
41	GO:0016126: sterol biosynthetic process	3.63E-03
42	GO:0009817: defense response to fungus, incompatible interaction	4.34E-03
43	GO:0048767: root hair elongation	4.49E-03
44	GO:0010043: response to zinc ion	4.80E-03
45	GO:0009853: photorespiration	5.11E-03
46	GO:0006631: fatty acid metabolic process	5.75E-03
47	GO:0008643: carbohydrate transport	6.42E-03
48	GO:0006812: cation transport	7.11E-03
49	GO:0042538: hyperosmotic salinity response	7.11E-03
50	GO:0051603: proteolysis involved in cellular protein catabolic process	7.65E-03
51	GO:0006511: ubiquitin-dependent protein catabolic process	8.17E-03
52	GO:0009620: response to fungus	8.97E-03
53	GO:0009624: response to nematode	9.56E-03
54	GO:0006396: RNA processing	9.75E-03
55	GO:0009742: brassinosteroid mediated signaling pathway	9.96E-03
56	GO:0042742: defense response to bacterium	1.22E-02
57	GO:0040008: regulation of growth	1.36E-02
58	GO:0055114: oxidation-reduction process	1.54E-02
59	GO:0007166: cell surface receptor signaling pathway	1.54E-02
60	GO:0009826: unidimensional cell growth	1.86E-02
61	GO:0009723: response to ethylene	2.12E-02
62	GO:0006869: lipid transport	2.71E-02
63	GO:0016042: lipid catabolic process	2.89E-02
64	GO:0009751: response to salicylic acid	2.92E-02
65	GO:0016310: phosphorylation	3.00E-02
66	GO:0009753: response to jasmonic acid	3.10E-02
67	GO:0009734: auxin-activated signaling pathway	3.76E-02
68	GO:0009651: response to salt stress	4.10E-02
69	GO:0009735: response to cytokinin	4.16E-02
70	GO:0009416: response to light stimulus	4.43E-02
71	GO:0051301: cell division	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
2	GO:0008777: acetylornithine deacetylase activity	0.00E+00
3	GO:0033971: hydroxyisourate hydrolase activity	0.00E+00
4	GO:0008752: FMN reductase activity	0.00E+00
5	GO:0047598: 7-dehydrocholesterol reductase activity	0.00E+00
6	GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	0.00E+00
7	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
8	GO:0009918: sterol delta7 reductase activity	0.00E+00
9	GO:0015157: oligosaccharide transmembrane transporter activity	2.41E-05
10	GO:0004633: phosphopantothenoylcysteine decarboxylase activity	2.41E-05
11	GO:0004048: anthranilate phosphoribosyltransferase activity	2.41E-05
12	GO:0004594: pantothenate kinase activity	6.16E-05
13	GO:0010181: FMN binding	1.04E-04
14	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.09E-04
15	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.09E-04
16	GO:0004848: ureidoglycolate hydrolase activity	1.09E-04
17	GO:0035198: miRNA binding	1.62E-04
18	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.62E-04
19	GO:0000062: fatty-acyl-CoA binding	2.21E-04
20	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.84E-04
21	GO:0015562: efflux transmembrane transporter activity	3.51E-04
22	GO:0004602: glutathione peroxidase activity	4.20E-04
23	GO:0005338: nucleotide-sugar transmembrane transporter activity	4.92E-04
24	GO:0008173: RNA methyltransferase activity	6.45E-04
25	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.16E-03
26	GO:0005385: zinc ion transmembrane transporter activity	1.55E-03
27	GO:0008324: cation transmembrane transporter activity	1.65E-03
28	GO:0004298: threonine-type endopeptidase activity	1.76E-03
29	GO:0008233: peptidase activity	2.29E-03
30	GO:0008237: metallopeptidase activity	3.35E-03
31	GO:0030145: manganese ion binding	4.80E-03
32	GO:0005198: structural molecule activity	6.59E-03
33	GO:0051287: NAD binding	6.94E-03
34	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	7.47E-03
35	GO:0016298: lipase activity	7.65E-03
36	GO:0045735: nutrient reservoir activity	8.40E-03
37	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.34E-02
38	GO:0005351: sugar:proton symporter activity	1.38E-02
39	GO:0016491: oxidoreductase activity	1.61E-02
40	GO:0000287: magnesium ion binding	1.89E-02
41	GO:0004601: peroxidase activity	1.92E-02
42	GO:0052689: carboxylic ester hydrolase activity	2.40E-02
43	GO:0004722: protein serine/threonine phosphatase activity	2.71E-02
44	GO:0009055: electron carrier activity	3.10E-02
45	GO:0008289: lipid binding	3.73E-02

Rank	GO Term	Adjusted P value
1	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	2.41E-05
2	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.62E-04
3	GO:0008250: oligosaccharyltransferase complex	2.84E-04
4	GO:0005771: multivesicular body	3.51E-04
5	GO:0030904: retromer complex	3.51E-04
6	GO:0031090: organelle membrane	7.25E-04
7	GO:0030176: integral component of endoplasmic reticulum membrane	1.35E-03
8	GO:0045271: respiratory chain complex I	1.65E-03
9	GO:0005839: proteasome core complex	1.76E-03
10	GO:0005829: cytosol	1.82E-03
11	GO:0000325: plant-type vacuole	4.80E-03
12	GO:0031902: late endosome membrane	5.75E-03
13	GO:0005777: peroxisome	6.90E-03
14	GO:0031966: mitochondrial membrane	7.11E-03
15	GO:0000502: proteasome complex	7.47E-03
16	GO:0005747: mitochondrial respiratory chain complex I	8.59E-03
17	GO:0009706: chloroplast inner membrane	9.56E-03
18	GO:0009536: plastid	1.50E-02
19	GO:0005615: extracellular space	1.52E-02
20	GO:0005789: endoplasmic reticulum membrane	1.87E-02
21	GO:0005794: Golgi apparatus	2.16E-02
22	GO:0031969: chloroplast membrane	2.23E-02
23	GO:0043231: intracellular membrane-bounded organelle	3.16E-02
24	GO:0048046: apoplast	4.44E-02