GO Enrichment Analysis of Co-expressed Genes with
AT5G58870
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007037: vacuolar phosphate transport | 0.00E+00 |
| 2 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 3 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 4 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 5 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 6 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 7 | GO:0098586: cellular response to virus | 0.00E+00 |
| 8 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.32E-05 |
| 9 | GO:0009658: chloroplast organization | 2.00E-05 |
| 10 | GO:0051775: response to redox state | 9.33E-05 |
| 11 | GO:0009443: pyridoxal 5'-phosphate salvage | 9.33E-05 |
| 12 | GO:0031426: polycistronic mRNA processing | 9.33E-05 |
| 13 | GO:0006637: acyl-CoA metabolic process | 9.33E-05 |
| 14 | GO:0070574: cadmium ion transmembrane transport | 9.33E-05 |
| 15 | GO:0051247: positive regulation of protein metabolic process | 9.33E-05 |
| 16 | GO:1902458: positive regulation of stomatal opening | 9.33E-05 |
| 17 | GO:2000905: negative regulation of starch metabolic process | 9.33E-05 |
| 18 | GO:0046741: transport of virus in host, tissue to tissue | 2.20E-04 |
| 19 | GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole | 2.20E-04 |
| 20 | GO:0000256: allantoin catabolic process | 2.20E-04 |
| 21 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 2.20E-04 |
| 22 | GO:0010024: phytochromobilin biosynthetic process | 2.20E-04 |
| 23 | GO:0006788: heme oxidation | 3.67E-04 |
| 24 | GO:0048586: regulation of long-day photoperiodism, flowering | 3.67E-04 |
| 25 | GO:0010136: ureide catabolic process | 3.67E-04 |
| 26 | GO:0010623: programmed cell death involved in cell development | 3.67E-04 |
| 27 | GO:0090153: regulation of sphingolipid biosynthetic process | 3.67E-04 |
| 28 | GO:0005977: glycogen metabolic process | 3.67E-04 |
| 29 | GO:0000913: preprophase band assembly | 3.67E-04 |
| 30 | GO:0031022: nuclear migration along microfilament | 3.67E-04 |
| 31 | GO:0006145: purine nucleobase catabolic process | 5.28E-04 |
| 32 | GO:0009226: nucleotide-sugar biosynthetic process | 5.28E-04 |
| 33 | GO:0043572: plastid fission | 5.28E-04 |
| 34 | GO:0090308: regulation of methylation-dependent chromatin silencing | 5.28E-04 |
| 35 | GO:0006107: oxaloacetate metabolic process | 5.28E-04 |
| 36 | GO:0010239: chloroplast mRNA processing | 5.28E-04 |
| 37 | GO:0009791: post-embryonic development | 6.66E-04 |
| 38 | GO:0019252: starch biosynthetic process | 6.66E-04 |
| 39 | GO:0010508: positive regulation of autophagy | 7.02E-04 |
| 40 | GO:0006734: NADH metabolic process | 7.02E-04 |
| 41 | GO:0010021: amylopectin biosynthetic process | 7.02E-04 |
| 42 | GO:2000306: positive regulation of photomorphogenesis | 7.02E-04 |
| 43 | GO:0032502: developmental process | 7.57E-04 |
| 44 | GO:0080110: sporopollenin biosynthetic process | 8.88E-04 |
| 45 | GO:0009904: chloroplast accumulation movement | 8.88E-04 |
| 46 | GO:0050665: hydrogen peroxide biosynthetic process | 1.08E-03 |
| 47 | GO:0009903: chloroplast avoidance movement | 1.29E-03 |
| 48 | GO:0010189: vitamin E biosynthetic process | 1.29E-03 |
| 49 | GO:0009854: oxidative photosynthetic carbon pathway | 1.29E-03 |
| 50 | GO:0042255: ribosome assembly | 1.75E-03 |
| 51 | GO:0006353: DNA-templated transcription, termination | 1.75E-03 |
| 52 | GO:0006875: cellular metal ion homeostasis | 1.75E-03 |
| 53 | GO:0009690: cytokinin metabolic process | 1.75E-03 |
| 54 | GO:2000070: regulation of response to water deprivation | 1.75E-03 |
| 55 | GO:0005975: carbohydrate metabolic process | 1.87E-03 |
| 56 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.00E-03 |
| 57 | GO:0048507: meristem development | 2.25E-03 |
| 58 | GO:0009821: alkaloid biosynthetic process | 2.25E-03 |
| 59 | GO:0019684: photosynthesis, light reaction | 3.09E-03 |
| 60 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.09E-03 |
| 61 | GO:0010216: maintenance of DNA methylation | 3.09E-03 |
| 62 | GO:0006108: malate metabolic process | 3.69E-03 |
| 63 | GO:0009767: photosynthetic electron transport chain | 3.69E-03 |
| 64 | GO:0010020: chloroplast fission | 4.01E-03 |
| 65 | GO:0051302: regulation of cell division | 5.36E-03 |
| 66 | GO:0031408: oxylipin biosynthetic process | 5.72E-03 |
| 67 | GO:0030245: cellulose catabolic process | 6.09E-03 |
| 68 | GO:0009306: protein secretion | 6.85E-03 |
| 69 | GO:0010089: xylem development | 6.85E-03 |
| 70 | GO:0010584: pollen exine formation | 6.85E-03 |
| 71 | GO:0008033: tRNA processing | 7.65E-03 |
| 72 | GO:0045489: pectin biosynthetic process | 8.06E-03 |
| 73 | GO:0048868: pollen tube development | 8.06E-03 |
| 74 | GO:0010468: regulation of gene expression | 8.21E-03 |
| 75 | GO:0007018: microtubule-based movement | 8.47E-03 |
| 76 | GO:0008654: phospholipid biosynthetic process | 8.90E-03 |
| 77 | GO:0055072: iron ion homeostasis | 8.90E-03 |
| 78 | GO:0000302: response to reactive oxygen species | 9.33E-03 |
| 79 | GO:0010583: response to cyclopentenone | 9.78E-03 |
| 80 | GO:0016032: viral process | 9.78E-03 |
| 81 | GO:0000910: cytokinesis | 1.16E-02 |
| 82 | GO:0010029: regulation of seed germination | 1.26E-02 |
| 83 | GO:0015979: photosynthesis | 1.51E-02 |
| 84 | GO:0071555: cell wall organization | 1.75E-02 |
| 85 | GO:0006099: tricarboxylic acid cycle | 1.78E-02 |
| 86 | GO:0030001: metal ion transport | 1.89E-02 |
| 87 | GO:0042546: cell wall biogenesis | 2.13E-02 |
| 88 | GO:0009644: response to high light intensity | 2.18E-02 |
| 89 | GO:0016569: covalent chromatin modification | 3.15E-02 |
| 90 | GO:0009740: gibberellic acid mediated signaling pathway | 3.15E-02 |
| 91 | GO:0006396: RNA processing | 3.35E-02 |
| 92 | GO:0009738: abscisic acid-activated signaling pathway | 3.36E-02 |
| 93 | GO:0009058: biosynthetic process | 4.00E-02 |
| 94 | GO:0009845: seed germination | 4.07E-02 |
| 95 | GO:0006413: translational initiation | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 2 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 3 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 4 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 5 | GO:0008158: hedgehog receptor activity | 9.33E-05 |
| 6 | GO:0008746: NAD(P)+ transhydrogenase activity | 9.33E-05 |
| 7 | GO:0004328: formamidase activity | 9.33E-05 |
| 8 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.08E-04 |
| 9 | GO:0003988: acetyl-CoA C-acyltransferase activity | 2.20E-04 |
| 10 | GO:0048531: beta-1,3-galactosyltransferase activity | 2.20E-04 |
| 11 | GO:0019156: isoamylase activity | 2.20E-04 |
| 12 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.20E-04 |
| 13 | GO:0004103: choline kinase activity | 2.20E-04 |
| 14 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.20E-04 |
| 15 | GO:0070402: NADPH binding | 3.67E-04 |
| 16 | GO:0004180: carboxypeptidase activity | 3.67E-04 |
| 17 | GO:0048027: mRNA 5'-UTR binding | 5.28E-04 |
| 18 | GO:0015086: cadmium ion transmembrane transporter activity | 5.28E-04 |
| 19 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 5.28E-04 |
| 20 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 5.28E-04 |
| 21 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 5.28E-04 |
| 22 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 5.28E-04 |
| 23 | GO:0009011: starch synthase activity | 7.02E-04 |
| 24 | GO:0004392: heme oxygenase (decyclizing) activity | 7.02E-04 |
| 25 | GO:0008891: glycolate oxidase activity | 7.02E-04 |
| 26 | GO:0080032: methyl jasmonate esterase activity | 7.02E-04 |
| 27 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 8.88E-04 |
| 28 | GO:0004556: alpha-amylase activity | 1.08E-03 |
| 29 | GO:0004462: lactoylglutathione lyase activity | 1.08E-03 |
| 30 | GO:0016615: malate dehydrogenase activity | 1.08E-03 |
| 31 | GO:0008200: ion channel inhibitor activity | 1.08E-03 |
| 32 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.08E-03 |
| 33 | GO:0080030: methyl indole-3-acetate esterase activity | 1.08E-03 |
| 34 | GO:0030060: L-malate dehydrogenase activity | 1.29E-03 |
| 35 | GO:0008195: phosphatidate phosphatase activity | 1.29E-03 |
| 36 | GO:0016491: oxidoreductase activity | 1.45E-03 |
| 37 | GO:0015103: inorganic anion transmembrane transporter activity | 1.51E-03 |
| 38 | GO:0004033: aldo-keto reductase (NADP) activity | 1.75E-03 |
| 39 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.79E-03 |
| 40 | GO:0008135: translation factor activity, RNA binding | 2.00E-03 |
| 41 | GO:0047617: acyl-CoA hydrolase activity | 2.52E-03 |
| 42 | GO:0016844: strictosidine synthase activity | 2.52E-03 |
| 43 | GO:0003924: GTPase activity | 3.45E-03 |
| 44 | GO:0008081: phosphoric diester hydrolase activity | 3.69E-03 |
| 45 | GO:0003824: catalytic activity | 4.66E-03 |
| 46 | GO:0016829: lyase activity | 5.39E-03 |
| 47 | GO:0008810: cellulase activity | 6.47E-03 |
| 48 | GO:0003727: single-stranded RNA binding | 6.85E-03 |
| 49 | GO:0046873: metal ion transmembrane transporter activity | 8.06E-03 |
| 50 | GO:0008080: N-acetyltransferase activity | 8.06E-03 |
| 51 | GO:0010181: FMN binding | 8.47E-03 |
| 52 | GO:0050662: coenzyme binding | 8.47E-03 |
| 53 | GO:0048038: quinone binding | 9.33E-03 |
| 54 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.01E-02 |
| 55 | GO:0016788: hydrolase activity, acting on ester bonds | 1.09E-02 |
| 56 | GO:0005525: GTP binding | 1.34E-02 |
| 57 | GO:0008236: serine-type peptidase activity | 1.41E-02 |
| 58 | GO:0004222: metalloendopeptidase activity | 1.56E-02 |
| 59 | GO:0003746: translation elongation factor activity | 1.73E-02 |
| 60 | GO:0003993: acid phosphatase activity | 1.78E-02 |
| 61 | GO:0003690: double-stranded DNA binding | 2.62E-02 |
| 62 | GO:0003777: microtubule motor activity | 2.75E-02 |
| 63 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.94E-02 |
| 64 | GO:0019843: rRNA binding | 3.85E-02 |
| 65 | GO:0015144: carbohydrate transmembrane transporter activity | 4.38E-02 |
| 66 | GO:0005351: sugar:proton symporter activity | 4.76E-02 |
| 67 | GO:0008017: microtubule binding | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.13E-09 |
| 3 | GO:0005773: vacuole | 1.19E-04 |
| 4 | GO:0080085: signal recognition particle, chloroplast targeting | 2.20E-04 |
| 5 | GO:0033281: TAT protein transport complex | 3.67E-04 |
| 6 | GO:0046658: anchored component of plasma membrane | 1.32E-03 |
| 7 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.00E-03 |
| 8 | GO:0042644: chloroplast nucleoid | 2.25E-03 |
| 9 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.25E-03 |
| 10 | GO:0005720: nuclear heterochromatin | 2.25E-03 |
| 11 | GO:0009941: chloroplast envelope | 4.14E-03 |
| 12 | GO:0005623: cell | 5.12E-03 |
| 13 | GO:0042651: thylakoid membrane | 5.36E-03 |
| 14 | GO:0005871: kinesin complex | 7.25E-03 |
| 15 | GO:0009504: cell plate | 8.90E-03 |
| 16 | GO:0005694: chromosome | 9.78E-03 |
| 17 | GO:0031225: anchored component of membrane | 1.25E-02 |
| 18 | GO:0009707: chloroplast outer membrane | 1.46E-02 |
| 19 | GO:0005819: spindle | 1.84E-02 |
| 20 | GO:0009570: chloroplast stroma | 2.36E-02 |
| 21 | GO:0012505: endomembrane system | 3.21E-02 |
| 22 | GO:0009706: chloroplast inner membrane | 3.28E-02 |
| 23 | GO:0005777: peroxisome | 3.98E-02 |
| 24 | GO:0009524: phragmoplast | 4.00E-02 |
| 25 | GO:0009579: thylakoid | 4.14E-02 |
| 26 | GO:0009534: chloroplast thylakoid | 4.18E-02 |
| 27 | GO:0009535: chloroplast thylakoid membrane | 4.75E-02 |
| 28 | GO:0009705: plant-type vacuole membrane | 4.84E-02 |