Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G58340

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905615: positive regulation of developmental vegetative growth0.00E+00
2GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
3GO:0045786: negative regulation of cell cycle3.37E-05
4GO:0043039: tRNA aminoacylation8.48E-05
5GO:0010116: positive regulation of abscisic acid biosynthetic process2.18E-04
6GO:0009956: radial pattern formation2.95E-04
7GO:0009793: embryo development ending in seed dormancy3.63E-04
8GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity4.63E-04
9GO:1901371: regulation of leaf morphogenesis4.63E-04
10GO:1901001: negative regulation of response to salt stress5.53E-04
11GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity5.53E-04
12GO:0006401: RNA catabolic process6.47E-04
13GO:0007050: cell cycle arrest6.47E-04
14GO:0009787: regulation of abscisic acid-activated signaling pathway7.44E-04
15GO:0010052: guard cell differentiation8.45E-04
16GO:0048829: root cap development1.17E-03
17GO:0010192: mucilage biosynthetic process1.17E-03
18GO:0009933: meristem structural organization1.65E-03
19GO:0010540: basipetal auxin transport1.65E-03
20GO:0009825: multidimensional cell growth1.78E-03
21GO:0009451: RNA modification1.90E-03
22GO:0006863: purine nucleobase transport1.91E-03
23GO:0009833: plant-type primary cell wall biogenesis1.91E-03
24GO:0009739: response to gibberellin2.07E-03
25GO:0006418: tRNA aminoacylation for protein translation2.19E-03
26GO:0003333: amino acid transmembrane transport2.33E-03
27GO:0009686: gibberellin biosynthetic process2.63E-03
28GO:0010082: regulation of root meristem growth2.63E-03
29GO:0006284: base-excision repair2.78E-03
30GO:0006468: protein phosphorylation3.02E-03
31GO:0010305: leaf vascular tissue pattern formation3.25E-03
32GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.64E-03
33GO:0002229: defense response to oomycetes3.76E-03
34GO:0010583: response to cyclopentenone3.93E-03
35GO:0009639: response to red or far red light4.28E-03
36GO:0030244: cellulose biosynthetic process5.79E-03
37GO:0009832: plant-type cell wall biogenesis5.99E-03
38GO:0000160: phosphorelay signal transduction system5.99E-03
39GO:0006865: amino acid transport6.61E-03
40GO:0009734: auxin-activated signaling pathway7.29E-03
41GO:0010114: response to red light8.14E-03
42GO:0009926: auxin polar transport8.14E-03
43GO:0009965: leaf morphogenesis8.82E-03
44GO:0006364: rRNA processing1.00E-02
45GO:0009736: cytokinin-activated signaling pathway1.00E-02
46GO:0043086: negative regulation of catalytic activity1.13E-02
47GO:0048316: seed development1.15E-02
48GO:0009740: gibberellic acid mediated signaling pathway1.23E-02
49GO:0009624: response to nematode1.28E-02
50GO:0051726: regulation of cell cycle1.34E-02
51GO:0045490: pectin catabolic process1.89E-02
52GO:0009658: chloroplast organization2.58E-02
53GO:0007049: cell cycle2.79E-02
54GO:0080167: response to karrikin3.01E-02
55GO:0009751: response to salicylic acid3.93E-02
56GO:0006281: DNA repair3.97E-02
57GO:0006397: mRNA processing4.10E-02
RankGO TermAdjusted P value
1GO:0008859: exoribonuclease II activity0.00E+00
2GO:0004831: tyrosine-tRNA ligase activity3.37E-05
3GO:0004540: ribonuclease activity8.81E-05
4GO:0016707: gibberellin 3-beta-dioxygenase activity1.47E-04
5GO:0019901: protein kinase binding1.78E-04
6GO:0010328: auxin influx transmembrane transporter activity2.95E-04
7GO:0008725: DNA-3-methyladenine glycosylase activity3.77E-04
8GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity4.63E-04
9GO:0030332: cyclin binding4.63E-04
10GO:0000175: 3'-5'-exoribonuclease activity1.52E-03
11GO:0004535: poly(A)-specific ribonuclease activity1.65E-03
12GO:0008134: transcription factor binding2.05E-03
13GO:0004857: enzyme inhibitor activity2.05E-03
14GO:0005345: purine nucleobase transmembrane transporter activity2.19E-03
15GO:0030570: pectate lyase activity2.63E-03
16GO:0016760: cellulose synthase (UDP-forming) activity2.63E-03
17GO:0004812: aminoacyl-tRNA ligase activity2.94E-03
18GO:0008080: N-acetyltransferase activity3.25E-03
19GO:0000156: phosphorelay response regulator activity4.10E-03
20GO:0016759: cellulose synthase activity4.28E-03
21GO:0003676: nucleic acid binding4.51E-03
22GO:0004693: cyclin-dependent protein serine/threonine kinase activity6.20E-03
23GO:0004712: protein serine/threonine/tyrosine kinase activity7.25E-03
24GO:0015293: symporter activity8.82E-03
25GO:0015171: amino acid transmembrane transporter activity1.08E-02
26GO:0003723: RNA binding1.19E-02
27GO:0004386: helicase activity1.37E-02
28GO:0005525: GTP binding1.52E-02
29GO:0016829: lyase activity1.59E-02
30GO:0046910: pectinesterase inhibitor activity1.80E-02
31GO:0004674: protein serine/threonine kinase activity2.42E-02
32GO:0005524: ATP binding3.05E-02
33GO:0004871: signal transducer activity3.54E-02
34GO:0016301: kinase activity3.70E-02
35GO:0004519: endonuclease activity4.22E-02
RankGO TermAdjusted P value
1GO:0000178: exosome (RNase complex)3.77E-04
2GO:0000932: P-body4.83E-03
3GO:0005654: nucleoplasm1.48E-02
4GO:0009507: chloroplast3.37E-02
5GO:0016021: integral component of membrane4.34E-02
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Gene type



Gene DE type