GO Enrichment Analysis of Co-expressed Genes with
AT5G58290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009173: pyrimidine ribonucleoside monophosphate metabolic process | 0.00E+00 |
| 2 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 3 | GO:2000117: negative regulation of cysteine-type endopeptidase activity | 0.00E+00 |
| 4 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.09E-07 |
| 5 | GO:0005513: detection of calcium ion | 1.80E-05 |
| 6 | GO:0006144: purine nucleobase metabolic process | 1.12E-04 |
| 7 | GO:0080120: CAAX-box protein maturation | 1.12E-04 |
| 8 | GO:0071586: CAAX-box protein processing | 1.12E-04 |
| 9 | GO:0019628: urate catabolic process | 1.12E-04 |
| 10 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 1.12E-04 |
| 11 | GO:0046686: response to cadmium ion | 1.74E-04 |
| 12 | GO:0051252: regulation of RNA metabolic process | 2.61E-04 |
| 13 | GO:0043132: NAD transport | 2.61E-04 |
| 14 | GO:0006123: mitochondrial electron transport, cytochrome c to oxygen | 2.61E-04 |
| 15 | GO:0006568: tryptophan metabolic process | 2.61E-04 |
| 16 | GO:0006695: cholesterol biosynthetic process | 2.61E-04 |
| 17 | GO:0010372: positive regulation of gibberellin biosynthetic process | 2.61E-04 |
| 18 | GO:0007031: peroxisome organization | 3.01E-04 |
| 19 | GO:0000162: tryptophan biosynthetic process | 3.37E-04 |
| 20 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.31E-04 |
| 21 | GO:0044375: regulation of peroxisome size | 4.32E-04 |
| 22 | GO:0090630: activation of GTPase activity | 4.32E-04 |
| 23 | GO:0010359: regulation of anion channel activity | 4.32E-04 |
| 24 | GO:0043617: cellular response to sucrose starvation | 4.32E-04 |
| 25 | GO:0015992: proton transport | 4.53E-04 |
| 26 | GO:0001676: long-chain fatty acid metabolic process | 6.19E-04 |
| 27 | GO:0015858: nucleoside transport | 6.19E-04 |
| 28 | GO:0010222: stem vascular tissue pattern formation | 8.23E-04 |
| 29 | GO:0010363: regulation of plant-type hypersensitive response | 8.23E-04 |
| 30 | GO:0006221: pyrimidine nucleotide biosynthetic process | 8.23E-04 |
| 31 | GO:0009058: biosynthetic process | 9.08E-04 |
| 32 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.04E-03 |
| 33 | GO:0018279: protein N-linked glycosylation via asparagine | 1.04E-03 |
| 34 | GO:0006564: L-serine biosynthetic process | 1.04E-03 |
| 35 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.27E-03 |
| 36 | GO:0043248: proteasome assembly | 1.27E-03 |
| 37 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.52E-03 |
| 38 | GO:0000054: ribosomal subunit export from nucleus | 1.52E-03 |
| 39 | GO:0009612: response to mechanical stimulus | 1.52E-03 |
| 40 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 1.78E-03 |
| 41 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 1.78E-03 |
| 42 | GO:0006102: isocitrate metabolic process | 2.06E-03 |
| 43 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.06E-03 |
| 44 | GO:0006402: mRNA catabolic process | 2.06E-03 |
| 45 | GO:0009826: unidimensional cell growth | 2.09E-03 |
| 46 | GO:0015031: protein transport | 2.12E-03 |
| 47 | GO:0006099: tricarboxylic acid cycle | 2.18E-03 |
| 48 | GO:0010099: regulation of photomorphogenesis | 2.35E-03 |
| 49 | GO:0006526: arginine biosynthetic process | 2.35E-03 |
| 50 | GO:0046685: response to arsenic-containing substance | 2.66E-03 |
| 51 | GO:0009821: alkaloid biosynthetic process | 2.66E-03 |
| 52 | GO:0090332: stomatal closure | 2.97E-03 |
| 53 | GO:0043069: negative regulation of programmed cell death | 3.30E-03 |
| 54 | GO:0045454: cell redox homeostasis | 3.61E-03 |
| 55 | GO:0072593: reactive oxygen species metabolic process | 3.65E-03 |
| 56 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 4.00E-03 |
| 57 | GO:0006790: sulfur compound metabolic process | 4.00E-03 |
| 58 | GO:0006820: anion transport | 4.00E-03 |
| 59 | GO:0006807: nitrogen compound metabolic process | 4.36E-03 |
| 60 | GO:0034605: cellular response to heat | 4.74E-03 |
| 61 | GO:0046854: phosphatidylinositol phosphorylation | 5.13E-03 |
| 62 | GO:0034976: response to endoplasmic reticulum stress | 5.52E-03 |
| 63 | GO:0006406: mRNA export from nucleus | 5.93E-03 |
| 64 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.22E-03 |
| 65 | GO:0042744: hydrogen peroxide catabolic process | 7.26E-03 |
| 66 | GO:0009411: response to UV | 7.67E-03 |
| 67 | GO:0040007: growth | 7.67E-03 |
| 68 | GO:0010227: floral organ abscission | 7.67E-03 |
| 69 | GO:0009306: protein secretion | 8.13E-03 |
| 70 | GO:0010089: xylem development | 8.13E-03 |
| 71 | GO:0019722: calcium-mediated signaling | 8.13E-03 |
| 72 | GO:0009561: megagametogenesis | 8.13E-03 |
| 73 | GO:0010118: stomatal movement | 9.08E-03 |
| 74 | GO:0006606: protein import into nucleus | 9.08E-03 |
| 75 | GO:0048868: pollen tube development | 9.57E-03 |
| 76 | GO:0009739: response to gibberellin | 9.85E-03 |
| 77 | GO:0009646: response to absence of light | 1.01E-02 |
| 78 | GO:0055114: oxidation-reduction process | 1.01E-02 |
| 79 | GO:0016132: brassinosteroid biosynthetic process | 1.11E-02 |
| 80 | GO:0010193: response to ozone | 1.11E-02 |
| 81 | GO:0031047: gene silencing by RNA | 1.16E-02 |
| 82 | GO:0030163: protein catabolic process | 1.22E-02 |
| 83 | GO:0006914: autophagy | 1.27E-02 |
| 84 | GO:0009567: double fertilization forming a zygote and endosperm | 1.27E-02 |
| 85 | GO:0016579: protein deubiquitination | 1.38E-02 |
| 86 | GO:0009615: response to virus | 1.44E-02 |
| 87 | GO:0016126: sterol biosynthetic process | 1.44E-02 |
| 88 | GO:0006950: response to stress | 1.62E-02 |
| 89 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.62E-02 |
| 90 | GO:0010311: lateral root formation | 1.80E-02 |
| 91 | GO:0006811: ion transport | 1.86E-02 |
| 92 | GO:0006499: N-terminal protein myristoylation | 1.86E-02 |
| 93 | GO:0010043: response to zinc ion | 1.93E-02 |
| 94 | GO:0010119: regulation of stomatal movement | 1.93E-02 |
| 95 | GO:0000724: double-strand break repair via homologous recombination | 1.99E-02 |
| 96 | GO:0006839: mitochondrial transport | 2.25E-02 |
| 97 | GO:0006631: fatty acid metabolic process | 2.32E-02 |
| 98 | GO:0042742: defense response to bacterium | 2.38E-02 |
| 99 | GO:0009744: response to sucrose | 2.46E-02 |
| 100 | GO:0008283: cell proliferation | 2.46E-02 |
| 101 | GO:0009751: response to salicylic acid | 2.47E-02 |
| 102 | GO:0006397: mRNA processing | 2.61E-02 |
| 103 | GO:0009753: response to jasmonic acid | 2.69E-02 |
| 104 | GO:0006855: drug transmembrane transport | 2.75E-02 |
| 105 | GO:0031347: regulation of defense response | 2.82E-02 |
| 106 | GO:0009664: plant-type cell wall organization | 2.89E-02 |
| 107 | GO:0009809: lignin biosynthetic process | 3.04E-02 |
| 108 | GO:0006096: glycolytic process | 3.43E-02 |
| 109 | GO:0009651: response to salt stress | 3.60E-02 |
| 110 | GO:0009620: response to fungus | 3.67E-02 |
| 111 | GO:0009553: embryo sac development | 3.83E-02 |
| 112 | GO:0009624: response to nematode | 3.91E-02 |
| 113 | GO:0018105: peptidyl-serine phosphorylation | 3.99E-02 |
| 114 | GO:0009735: response to cytokinin | 4.05E-02 |
| 115 | GO:0009611: response to wounding | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 2 | GO:0047598: 7-dehydrocholesterol reductase activity | 0.00E+00 |
| 3 | GO:0008418: protein-N-terminal asparagine amidohydrolase activity | 0.00E+00 |
| 4 | GO:0009918: sterol delta7 reductase activity | 0.00E+00 |
| 5 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 6 | GO:0044610: FMN transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0004298: threonine-type endopeptidase activity | 2.67E-11 |
| 8 | GO:0004640: phosphoribosylanthranilate isomerase activity | 6.45E-07 |
| 9 | GO:0008233: peptidase activity | 4.17E-06 |
| 10 | GO:0019786: Atg8-specific protease activity | 1.12E-04 |
| 11 | GO:0048037: cofactor binding | 1.12E-04 |
| 12 | GO:0015230: FAD transmembrane transporter activity | 1.12E-04 |
| 13 | GO:0008517: folic acid transporter activity | 2.61E-04 |
| 14 | GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 2.61E-04 |
| 15 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.61E-04 |
| 16 | GO:0015228: coenzyme A transmembrane transporter activity | 2.61E-04 |
| 17 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.61E-04 |
| 18 | GO:0051724: NAD transporter activity | 2.61E-04 |
| 19 | GO:0004127: cytidylate kinase activity | 2.61E-04 |
| 20 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.61E-04 |
| 21 | GO:0019779: Atg8 activating enzyme activity | 2.61E-04 |
| 22 | GO:0008428: ribonuclease inhibitor activity | 2.61E-04 |
| 23 | GO:0052692: raffinose alpha-galactosidase activity | 4.32E-04 |
| 24 | GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 4.32E-04 |
| 25 | GO:0004848: ureidoglycolate hydrolase activity | 4.32E-04 |
| 26 | GO:0004557: alpha-galactosidase activity | 4.32E-04 |
| 27 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 4.32E-04 |
| 28 | GO:0009041: uridylate kinase activity | 6.19E-04 |
| 29 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 6.19E-04 |
| 30 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 6.19E-04 |
| 31 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 8.23E-04 |
| 32 | GO:0019776: Atg8 ligase activity | 8.23E-04 |
| 33 | GO:0004518: nuclease activity | 9.56E-04 |
| 34 | GO:0008948: oxaloacetate decarboxylase activity | 1.04E-03 |
| 35 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.04E-03 |
| 36 | GO:0080122: AMP transmembrane transporter activity | 1.04E-03 |
| 37 | GO:0008565: protein transporter activity | 1.06E-03 |
| 38 | GO:0036402: proteasome-activating ATPase activity | 1.27E-03 |
| 39 | GO:0046872: metal ion binding | 1.27E-03 |
| 40 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.27E-03 |
| 41 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.27E-03 |
| 42 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.52E-03 |
| 43 | GO:0015217: ADP transmembrane transporter activity | 1.52E-03 |
| 44 | GO:0051920: peroxiredoxin activity | 1.52E-03 |
| 45 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.52E-03 |
| 46 | GO:0102391: decanoate--CoA ligase activity | 1.52E-03 |
| 47 | GO:0005347: ATP transmembrane transporter activity | 1.52E-03 |
| 48 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.78E-03 |
| 49 | GO:0015288: porin activity | 2.06E-03 |
| 50 | GO:0016209: antioxidant activity | 2.06E-03 |
| 51 | GO:0004601: peroxidase activity | 2.19E-03 |
| 52 | GO:0008308: voltage-gated anion channel activity | 2.35E-03 |
| 53 | GO:0030955: potassium ion binding | 2.97E-03 |
| 54 | GO:0016844: strictosidine synthase activity | 2.97E-03 |
| 55 | GO:0004743: pyruvate kinase activity | 2.97E-03 |
| 56 | GO:0005198: structural molecule activity | 3.00E-03 |
| 57 | GO:0051287: NAD binding | 3.23E-03 |
| 58 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 3.30E-03 |
| 59 | GO:0008559: xenobiotic-transporting ATPase activity | 3.65E-03 |
| 60 | GO:0008794: arsenate reductase (glutaredoxin) activity | 3.65E-03 |
| 61 | GO:0004521: endoribonuclease activity | 4.00E-03 |
| 62 | GO:0003924: GTPase activity | 4.71E-03 |
| 63 | GO:0004175: endopeptidase activity | 4.74E-03 |
| 64 | GO:0017025: TBP-class protein binding | 5.13E-03 |
| 65 | GO:0031418: L-ascorbic acid binding | 5.93E-03 |
| 66 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 6.78E-03 |
| 67 | GO:0003756: protein disulfide isomerase activity | 8.13E-03 |
| 68 | GO:0000166: nucleotide binding | 9.76E-03 |
| 69 | GO:0016853: isomerase activity | 1.01E-02 |
| 70 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 1.11E-02 |
| 71 | GO:0008237: metallopeptidase activity | 1.33E-02 |
| 72 | GO:0000287: magnesium ion binding | 1.34E-02 |
| 73 | GO:0016597: amino acid binding | 1.38E-02 |
| 74 | GO:0005507: copper ion binding | 1.53E-02 |
| 75 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.56E-02 |
| 76 | GO:0004683: calmodulin-dependent protein kinase activity | 1.62E-02 |
| 77 | GO:0005096: GTPase activator activity | 1.80E-02 |
| 78 | GO:0005525: GTP binding | 1.83E-02 |
| 79 | GO:0004222: metalloendopeptidase activity | 1.86E-02 |
| 80 | GO:0016787: hydrolase activity | 1.86E-02 |
| 81 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.06E-02 |
| 82 | GO:0005509: calcium ion binding | 2.15E-02 |
| 83 | GO:0009055: electron carrier activity | 2.69E-02 |
| 84 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.04E-02 |
| 85 | GO:0015035: protein disulfide oxidoreductase activity | 3.99E-02 |
| 86 | GO:0008026: ATP-dependent helicase activity | 4.08E-02 |
| 87 | GO:0020037: heme binding | 4.19E-02 |
| 88 | GO:0030170: pyridoxal phosphate binding | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 2.75E-13 |
| 2 | GO:0005839: proteasome core complex | 2.67E-11 |
| 3 | GO:0005774: vacuolar membrane | 1.96E-08 |
| 4 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.01E-06 |
| 5 | GO:0046861: glyoxysomal membrane | 2.44E-06 |
| 6 | GO:0005773: vacuole | 1.13E-05 |
| 7 | GO:0005829: cytosol | 2.15E-05 |
| 8 | GO:0009514: glyoxysome | 8.55E-05 |
| 9 | GO:0016442: RISC complex | 1.12E-04 |
| 10 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.01E-04 |
| 11 | GO:0005794: Golgi apparatus | 3.21E-04 |
| 12 | GO:0005775: vacuolar lumen | 6.19E-04 |
| 13 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 8.23E-04 |
| 14 | GO:0030117: membrane coat | 8.23E-04 |
| 15 | GO:0005776: autophagosome | 8.23E-04 |
| 16 | GO:0008250: oligosaccharyltransferase complex | 1.04E-03 |
| 17 | GO:0005778: peroxisomal membrane | 1.14E-03 |
| 18 | GO:0031597: cytosolic proteasome complex | 1.52E-03 |
| 19 | GO:0031595: nuclear proteasome complex | 1.78E-03 |
| 20 | GO:0000421: autophagosome membrane | 2.06E-03 |
| 21 | GO:0046930: pore complex | 2.35E-03 |
| 22 | GO:0005779: integral component of peroxisomal membrane | 2.35E-03 |
| 23 | GO:0005777: peroxisome | 2.49E-03 |
| 24 | GO:0010494: cytoplasmic stress granule | 2.66E-03 |
| 25 | GO:0030665: clathrin-coated vesicle membrane | 2.97E-03 |
| 26 | GO:0008540: proteasome regulatory particle, base subcomplex | 2.97E-03 |
| 27 | GO:0030125: clathrin vesicle coat | 3.30E-03 |
| 28 | GO:0008541: proteasome regulatory particle, lid subcomplex | 3.65E-03 |
| 29 | GO:0048471: perinuclear region of cytoplasm | 3.65E-03 |
| 30 | GO:0005737: cytoplasm | 3.77E-03 |
| 31 | GO:0005635: nuclear envelope | 3.84E-03 |
| 32 | GO:0005665: DNA-directed RNA polymerase II, core complex | 4.00E-03 |
| 33 | GO:0048046: apoplast | 4.09E-03 |
| 34 | GO:0005618: cell wall | 4.84E-03 |
| 35 | GO:0000419: DNA-directed RNA polymerase V complex | 5.52E-03 |
| 36 | GO:0005758: mitochondrial intermembrane space | 5.93E-03 |
| 37 | GO:0070469: respiratory chain | 6.35E-03 |
| 38 | GO:0005741: mitochondrial outer membrane | 6.78E-03 |
| 39 | GO:0031410: cytoplasmic vesicle | 7.22E-03 |
| 40 | GO:0000932: P-body | 1.44E-02 |
| 41 | GO:0005783: endoplasmic reticulum | 1.45E-02 |
| 42 | GO:0005802: trans-Golgi network | 1.77E-02 |
| 43 | GO:0000325: plant-type vacuole | 1.93E-02 |
| 44 | GO:0005768: endosome | 2.09E-02 |
| 45 | GO:0009505: plant-type cell wall | 3.16E-02 |
| 46 | GO:0005789: endoplasmic reticulum membrane | 4.03E-02 |
| 47 | GO:0005886: plasma membrane | 4.22E-02 |
| 48 | GO:0005730: nucleolus | 4.56E-02 |
| 49 | GO:0005623: cell | 4.68E-02 |