GO Enrichment Analysis of Co-expressed Genes with
AT5G56860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090358: positive regulation of tryptophan metabolic process | 0.00E+00 |
| 2 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 3 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 4 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 5 | GO:0090355: positive regulation of auxin metabolic process | 0.00E+00 |
| 6 | GO:0031116: positive regulation of microtubule polymerization | 0.00E+00 |
| 7 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 8 | GO:0046396: D-galacturonate metabolic process | 0.00E+00 |
| 9 | GO:0007155: cell adhesion | 1.06E-04 |
| 10 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 1.50E-04 |
| 11 | GO:1902265: abscisic acid homeostasis | 1.50E-04 |
| 12 | GO:0043971: histone H3-K18 acetylation | 1.50E-04 |
| 13 | GO:0048657: anther wall tapetum cell differentiation | 1.50E-04 |
| 14 | GO:0010480: microsporocyte differentiation | 1.50E-04 |
| 15 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 1.96E-04 |
| 16 | GO:0010192: mucilage biosynthetic process | 2.32E-04 |
| 17 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.42E-04 |
| 18 | GO:0010569: regulation of double-strand break repair via homologous recombination | 3.42E-04 |
| 19 | GO:0080005: photosystem stoichiometry adjustment | 3.42E-04 |
| 20 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 3.42E-04 |
| 21 | GO:0080188: RNA-directed DNA methylation | 4.48E-04 |
| 22 | GO:0001578: microtubule bundle formation | 5.61E-04 |
| 23 | GO:0045493: xylan catabolic process | 5.61E-04 |
| 24 | GO:0031022: nuclear migration along microfilament | 5.61E-04 |
| 25 | GO:0006013: mannose metabolic process | 5.61E-04 |
| 26 | GO:0071705: nitrogen compound transport | 5.61E-04 |
| 27 | GO:0010306: rhamnogalacturonan II biosynthetic process | 8.03E-04 |
| 28 | GO:0051322: anaphase | 1.06E-03 |
| 29 | GO:0071249: cellular response to nitrate | 1.06E-03 |
| 30 | GO:0006552: leucine catabolic process | 1.06E-03 |
| 31 | GO:0007020: microtubule nucleation | 1.06E-03 |
| 32 | GO:0015846: polyamine transport | 1.06E-03 |
| 33 | GO:0009902: chloroplast relocation | 1.06E-03 |
| 34 | GO:0048868: pollen tube development | 1.07E-03 |
| 35 | GO:0046785: microtubule polymerization | 1.35E-03 |
| 36 | GO:0010315: auxin efflux | 1.65E-03 |
| 37 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.98E-03 |
| 38 | GO:0046835: carbohydrate phosphorylation | 1.98E-03 |
| 39 | GO:0034389: lipid particle organization | 1.98E-03 |
| 40 | GO:0009903: chloroplast avoidance movement | 1.98E-03 |
| 41 | GO:0009610: response to symbiotic fungus | 2.33E-03 |
| 42 | GO:0048528: post-embryonic root development | 2.33E-03 |
| 43 | GO:0048437: floral organ development | 2.33E-03 |
| 44 | GO:0022904: respiratory electron transport chain | 2.33E-03 |
| 45 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.70E-03 |
| 46 | GO:0006353: DNA-templated transcription, termination | 2.70E-03 |
| 47 | GO:0007389: pattern specification process | 3.08E-03 |
| 48 | GO:0044030: regulation of DNA methylation | 3.08E-03 |
| 49 | GO:0006002: fructose 6-phosphate metabolic process | 3.08E-03 |
| 50 | GO:0022900: electron transport chain | 3.08E-03 |
| 51 | GO:0009826: unidimensional cell growth | 3.48E-03 |
| 52 | GO:0019432: triglyceride biosynthetic process | 3.49E-03 |
| 53 | GO:0048229: gametophyte development | 4.80E-03 |
| 54 | GO:0009750: response to fructose | 4.80E-03 |
| 55 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 5.00E-03 |
| 56 | GO:0015706: nitrate transport | 5.27E-03 |
| 57 | GO:0010075: regulation of meristem growth | 5.75E-03 |
| 58 | GO:0030048: actin filament-based movement | 5.75E-03 |
| 59 | GO:0009934: regulation of meristem structural organization | 6.25E-03 |
| 60 | GO:0009825: multidimensional cell growth | 6.77E-03 |
| 61 | GO:0010167: response to nitrate | 6.77E-03 |
| 62 | GO:0006071: glycerol metabolic process | 7.30E-03 |
| 63 | GO:0000162: tryptophan biosynthetic process | 7.30E-03 |
| 64 | GO:0006289: nucleotide-excision repair | 7.84E-03 |
| 65 | GO:0010073: meristem maintenance | 8.40E-03 |
| 66 | GO:0043622: cortical microtubule organization | 8.40E-03 |
| 67 | GO:0080092: regulation of pollen tube growth | 9.56E-03 |
| 68 | GO:0006012: galactose metabolic process | 1.02E-02 |
| 69 | GO:0010584: pollen exine formation | 1.08E-02 |
| 70 | GO:0048653: anther development | 1.20E-02 |
| 71 | GO:0010268: brassinosteroid homeostasis | 1.27E-02 |
| 72 | GO:0009646: response to absence of light | 1.34E-02 |
| 73 | GO:0009451: RNA modification | 1.35E-02 |
| 74 | GO:0009851: auxin biosynthetic process | 1.41E-02 |
| 75 | GO:0009749: response to glucose | 1.41E-02 |
| 76 | GO:0016132: brassinosteroid biosynthetic process | 1.47E-02 |
| 77 | GO:0009739: response to gibberellin | 1.48E-02 |
| 78 | GO:0006468: protein phosphorylation | 1.50E-02 |
| 79 | GO:0007264: small GTPase mediated signal transduction | 1.55E-02 |
| 80 | GO:0010583: response to cyclopentenone | 1.55E-02 |
| 81 | GO:0071281: cellular response to iron ion | 1.62E-02 |
| 82 | GO:0016125: sterol metabolic process | 1.69E-02 |
| 83 | GO:0010252: auxin homeostasis | 1.69E-02 |
| 84 | GO:0000910: cytokinesis | 1.84E-02 |
| 85 | GO:0016126: sterol biosynthetic process | 1.92E-02 |
| 86 | GO:0009911: positive regulation of flower development | 1.92E-02 |
| 87 | GO:0010029: regulation of seed germination | 1.99E-02 |
| 88 | GO:0006508: proteolysis | 1.99E-02 |
| 89 | GO:0010411: xyloglucan metabolic process | 2.15E-02 |
| 90 | GO:0009860: pollen tube growth | 2.20E-02 |
| 91 | GO:0030244: cellulose biosynthetic process | 2.31E-02 |
| 92 | GO:0009834: plant-type secondary cell wall biogenesis | 2.48E-02 |
| 93 | GO:0006811: ion transport | 2.48E-02 |
| 94 | GO:0007568: aging | 2.56E-02 |
| 95 | GO:0046777: protein autophosphorylation | 2.71E-02 |
| 96 | GO:0009637: response to blue light | 2.74E-02 |
| 97 | GO:0009853: photorespiration | 2.74E-02 |
| 98 | GO:0009926: auxin polar transport | 3.28E-02 |
| 99 | GO:0009744: response to sucrose | 3.28E-02 |
| 100 | GO:0051707: response to other organism | 3.28E-02 |
| 101 | GO:0008283: cell proliferation | 3.28E-02 |
| 102 | GO:0009664: plant-type cell wall organization | 3.85E-02 |
| 103 | GO:0071555: cell wall organization | 3.93E-02 |
| 104 | GO:0008152: metabolic process | 4.12E-02 |
| 105 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.15E-02 |
| 106 | GO:0010224: response to UV-B | 4.15E-02 |
| 107 | GO:0006096: glycolytic process | 4.56E-02 |
| 108 | GO:0009740: gibberellic acid mediated signaling pathway | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor | 0.00E+00 |
| 2 | GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity | 0.00E+00 |
| 3 | GO:0004174: electron-transferring-flavoprotein dehydrogenase activity | 0.00E+00 |
| 4 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 5 | GO:0047912: galacturonokinase activity | 0.00E+00 |
| 6 | GO:0019808: polyamine binding | 0.00E+00 |
| 7 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 8 | GO:0048039: ubiquinone binding | 0.00E+00 |
| 9 | GO:0047807: cytokinin 7-beta-glucosyltransferase activity | 1.50E-04 |
| 10 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 1.50E-04 |
| 11 | GO:0080062: cytokinin 9-beta-glucosyltransferase activity | 1.50E-04 |
| 12 | GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity | 3.42E-04 |
| 13 | GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity | 3.42E-04 |
| 14 | GO:0016805: dipeptidase activity | 5.61E-04 |
| 15 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 5.61E-04 |
| 16 | GO:0032549: ribonucleoside binding | 5.61E-04 |
| 17 | GO:0004176: ATP-dependent peptidase activity | 6.67E-04 |
| 18 | GO:0000254: C-4 methylsterol oxidase activity | 8.03E-04 |
| 19 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.06E-03 |
| 20 | GO:0004335: galactokinase activity | 1.06E-03 |
| 21 | GO:0080032: methyl jasmonate esterase activity | 1.06E-03 |
| 22 | GO:0010385: double-stranded methylated DNA binding | 1.06E-03 |
| 23 | GO:0070628: proteasome binding | 1.06E-03 |
| 24 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.06E-03 |
| 25 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.35E-03 |
| 26 | GO:0031593: polyubiquitin binding | 1.65E-03 |
| 27 | GO:0004559: alpha-mannosidase activity | 1.98E-03 |
| 28 | GO:0004144: diacylglycerol O-acyltransferase activity | 1.98E-03 |
| 29 | GO:0003872: 6-phosphofructokinase activity | 2.33E-03 |
| 30 | GO:0019899: enzyme binding | 2.33E-03 |
| 31 | GO:0009672: auxin:proton symporter activity | 3.91E-03 |
| 32 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.30E-03 |
| 33 | GO:0043621: protein self-association | 4.30E-03 |
| 34 | GO:0015020: glucuronosyltransferase activity | 4.35E-03 |
| 35 | GO:0001054: RNA polymerase I activity | 4.80E-03 |
| 36 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 4.80E-03 |
| 37 | GO:0008327: methyl-CpG binding | 4.80E-03 |
| 38 | GO:0010329: auxin efflux transmembrane transporter activity | 5.75E-03 |
| 39 | GO:0016301: kinase activity | 6.16E-03 |
| 40 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.25E-03 |
| 41 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 6.95E-03 |
| 42 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 6.95E-03 |
| 43 | GO:0043130: ubiquitin binding | 7.84E-03 |
| 44 | GO:0033612: receptor serine/threonine kinase binding | 8.97E-03 |
| 45 | GO:0046872: metal ion binding | 1.08E-02 |
| 46 | GO:0004402: histone acetyltransferase activity | 1.20E-02 |
| 47 | GO:0008017: microtubule binding | 1.38E-02 |
| 48 | GO:0019901: protein kinase binding | 1.41E-02 |
| 49 | GO:0008194: UDP-glycosyltransferase activity | 1.48E-02 |
| 50 | GO:0004674: protein serine/threonine kinase activity | 1.63E-02 |
| 51 | GO:0003684: damaged DNA binding | 1.69E-02 |
| 52 | GO:0005524: ATP binding | 1.75E-02 |
| 53 | GO:0008237: metallopeptidase activity | 1.76E-02 |
| 54 | GO:0046982: protein heterodimerization activity | 2.01E-02 |
| 55 | GO:0004806: triglyceride lipase activity | 2.15E-02 |
| 56 | GO:0030247: polysaccharide binding | 2.15E-02 |
| 57 | GO:0004721: phosphoprotein phosphatase activity | 2.15E-02 |
| 58 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.48E-02 |
| 59 | GO:0008233: peptidase activity | 2.50E-02 |
| 60 | GO:0003993: acid phosphatase activity | 2.83E-02 |
| 61 | GO:0042393: histone binding | 3.00E-02 |
| 62 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.00E-02 |
| 63 | GO:0004871: signal transducer activity | 3.18E-02 |
| 64 | GO:0004185: serine-type carboxypeptidase activity | 3.28E-02 |
| 65 | GO:0004722: protein serine/threonine phosphatase activity | 3.33E-02 |
| 66 | GO:0003924: GTPase activity | 3.74E-02 |
| 67 | GO:0009055: electron carrier activity | 4.01E-02 |
| 68 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.05E-02 |
| 69 | GO:0004519: endonuclease activity | 4.06E-02 |
| 70 | GO:0003777: microtubule motor activity | 4.36E-02 |
| 71 | GO:0022857: transmembrane transporter activity | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017133: mitochondrial electron transfer flavoprotein complex | 0.00E+00 |
| 2 | GO:0042597: periplasmic space | 0.00E+00 |
| 3 | GO:0010370: perinucleolar chromocenter | 1.50E-04 |
| 4 | GO:0009897: external side of plasma membrane | 5.61E-04 |
| 5 | GO:0072686: mitotic spindle | 1.35E-03 |
| 6 | GO:0005945: 6-phosphofructokinase complex | 1.35E-03 |
| 7 | GO:0010005: cortical microtubule, transverse to long axis | 1.98E-03 |
| 8 | GO:0005655: nucleolar ribonuclease P complex | 1.98E-03 |
| 9 | GO:0009507: chloroplast | 2.36E-03 |
| 10 | GO:0031305: integral component of mitochondrial inner membrane | 2.70E-03 |
| 11 | GO:0005811: lipid particle | 3.08E-03 |
| 12 | GO:0005819: spindle | 3.37E-03 |
| 13 | GO:0005720: nuclear heterochromatin | 3.49E-03 |
| 14 | GO:0005736: DNA-directed RNA polymerase I complex | 3.49E-03 |
| 15 | GO:0055028: cortical microtubule | 4.35E-03 |
| 16 | GO:0005740: mitochondrial envelope | 4.35E-03 |
| 17 | GO:0016324: apical plasma membrane | 4.35E-03 |
| 18 | GO:0005886: plasma membrane | 4.99E-03 |
| 19 | GO:0005938: cell cortex | 5.75E-03 |
| 20 | GO:0016602: CCAAT-binding factor complex | 5.75E-03 |
| 21 | GO:0009574: preprophase band | 5.75E-03 |
| 22 | GO:0031225: anchored component of membrane | 7.34E-03 |
| 23 | GO:0005802: trans-Golgi network | 7.64E-03 |
| 24 | GO:0045271: respiratory chain complex I | 8.40E-03 |
| 25 | GO:0043231: intracellular membrane-bounded organelle | 8.90E-03 |
| 26 | GO:0005768: endosome | 9.28E-03 |
| 27 | GO:0009505: plant-type cell wall | 1.53E-02 |
| 28 | GO:0046658: anchored component of plasma membrane | 1.75E-02 |
| 29 | GO:0009707: chloroplast outer membrane | 2.31E-02 |
| 30 | GO:0005874: microtubule | 2.45E-02 |
| 31 | GO:0005856: cytoskeleton | 3.56E-02 |
| 32 | GO:0031966: mitochondrial membrane | 3.85E-02 |
| 33 | GO:0005747: mitochondrial respiratory chain complex I | 4.67E-02 |