Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G56380

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042794: rRNA transcription from plastid promoter0.00E+00
2GO:0035884: arabinan biosynthetic process0.00E+00
3GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA0.00E+00
4GO:0010070: zygote asymmetric cell division4.45E-05
5GO:0090063: positive regulation of microtubule nucleation4.45E-05
6GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic4.45E-05
7GO:0033566: gamma-tubulin complex localization1.10E-04
8GO:0010069: zygote asymmetric cytokinesis in embryo sac1.10E-04
9GO:0006397: mRNA processing1.28E-04
10GO:0006518: peptide metabolic process1.89E-04
11GO:0042780: tRNA 3'-end processing1.89E-04
12GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.89E-04
13GO:0080156: mitochondrial mRNA modification2.76E-04
14GO:0009416: response to light stimulus3.11E-04
15GO:0009616: virus induced gene silencing4.75E-04
16GO:0042793: transcription from plastid promoter5.82E-04
17GO:0035194: posttranscriptional gene silencing by RNA5.82E-04
18GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway8.11E-04
19GO:0007050: cell cycle arrest8.11E-04
20GO:0031540: regulation of anthocyanin biosynthetic process9.32E-04
21GO:0048564: photosystem I assembly9.32E-04
22GO:0045292: mRNA cis splicing, via spliceosome9.32E-04
23GO:0042255: ribosome assembly9.32E-04
24GO:0006353: DNA-templated transcription, termination9.32E-04
25GO:0007186: G-protein coupled receptor signaling pathway1.06E-03
26GO:0000373: Group II intron splicing1.19E-03
27GO:1900865: chloroplast RNA modification1.32E-03
28GO:0048229: gametophyte development1.61E-03
29GO:0016485: protein processing1.61E-03
30GO:0010229: inflorescence development1.92E-03
31GO:0009887: animal organ morphogenesis2.09E-03
32GO:0048467: gynoecium development2.09E-03
33GO:0080188: RNA-directed DNA methylation2.25E-03
34GO:0042023: DNA endoreduplication2.42E-03
35GO:0009451: RNA modification2.69E-03
36GO:0006874: cellular calcium ion homeostasis2.77E-03
37GO:0006306: DNA methylation2.96E-03
38GO:0009958: positive gravitropism4.14E-03
39GO:0031047: gene silencing by RNA4.99E-03
40GO:0032502: developmental process4.99E-03
41GO:0006508: proteolysis4.99E-03
42GO:0010252: auxin homeostasis5.45E-03
43GO:0006974: cellular response to DNA damage stimulus6.64E-03
44GO:0009832: plant-type cell wall biogenesis7.65E-03
45GO:0006811: ion transport7.91E-03
46GO:0008283: cell proliferation1.04E-02
47GO:0006364: rRNA processing1.28E-02
48GO:0009793: embryo development ending in seed dormancy1.47E-02
49GO:0048316: seed development1.48E-02
50GO:0009790: embryo development2.16E-02
51GO:0007623: circadian rhythm2.43E-02
52GO:0010228: vegetative to reproductive phase transition of meristem2.51E-02
53GO:0008380: RNA splicing2.76E-02
54GO:0009658: chloroplast organization3.32E-02
55GO:0042254: ribosome biogenesis3.36E-02
56GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.96E-02
57GO:0046777: protein autophosphorylation4.06E-02
RankGO TermAdjusted P value
1GO:0004519: endonuclease activity1.38E-04
2GO:0042781: 3'-tRNA processing endoribonuclease activity1.89E-04
3GO:0004930: G-protein coupled receptor activity3.73E-04
4GO:0004222: metalloendopeptidase activity5.68E-04
5GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity5.82E-04
6GO:0004871: signal transducer activity8.32E-04
7GO:0003724: RNA helicase activity1.06E-03
8GO:0004970: ionotropic glutamate receptor activity2.25E-03
9GO:0005217: intracellular ligand-gated ion channel activity2.25E-03
10GO:0033612: receptor serine/threonine kinase binding2.96E-03
11GO:0003727: single-stranded RNA binding3.53E-03
12GO:0005102: receptor binding3.73E-03
13GO:0008237: metallopeptidase activity5.68E-03
14GO:0003824: catalytic activity5.69E-03
15GO:0003690: double-stranded DNA binding1.32E-02
16GO:0008234: cysteine-type peptidase activity1.38E-02
17GO:0008026: ATP-dependent helicase activity1.72E-02
18GO:0019843: rRNA binding1.93E-02
19GO:0003723: RNA binding2.04E-02
20GO:0046983: protein dimerization activity3.55E-02
21GO:0008233: peptidase activity3.82E-02
22GO:0042803: protein homodimerization activity4.55E-02
RankGO TermAdjusted P value
1GO:0000930: gamma-tubulin complex3.73E-04
2GO:0005739: mitochondrion1.13E-03
3GO:0000922: spindle pole1.19E-03
4GO:0042644: chloroplast nucleoid1.19E-03
5GO:0055028: cortical microtubule1.47E-03
6GO:0005938: cell cortex1.92E-03
7GO:0000419: DNA-directed RNA polymerase V complex2.42E-03
8GO:0071944: cell periphery5.22E-03
9GO:0009507: chloroplast5.54E-03
10GO:0090406: pollen tube1.04E-02
11GO:0005635: nuclear envelope1.35E-02
12GO:0005759: mitochondrial matrix2.27E-02
13GO:0048046: apoplast2.59E-02
14GO:0005615: extracellular space2.63E-02
15GO:0009536: plastid3.27E-02
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Gene type



Gene DE type