Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G56260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000117: negative regulation of cysteine-type endopeptidase activity0.00E+00
2GO:0043132: NAD transport3.88E-05
3GO:0006123: mitochondrial electron transport, cytochrome c to oxygen3.88E-05
4GO:0046939: nucleotide phosphorylation3.88E-05
5GO:0006568: tryptophan metabolic process3.88E-05
6GO:0010372: positive regulation of gibberellin biosynthetic process3.88E-05
7GO:0010359: regulation of anion channel activity6.95E-05
8GO:0044375: regulation of peroxisome size6.95E-05
9GO:0015858: nucleoside transport1.05E-04
10GO:0045454: cell redox homeostasis1.25E-04
11GO:0097428: protein maturation by iron-sulfur cluster transfer1.88E-04
12GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly2.34E-04
13GO:0009648: photoperiodism2.82E-04
14GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c3.32E-04
15GO:0006402: mRNA catabolic process3.84E-04
16GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.84E-04
17GO:0090332: stomatal closure5.49E-04
18GO:0043069: negative regulation of programmed cell death6.08E-04
19GO:0034605: cellular response to heat8.55E-04
20GO:0000162: tryptophan biosynthetic process9.85E-04
21GO:0015992: proton transport1.19E-03
22GO:0030433: ubiquitin-dependent ERAD pathway1.26E-03
23GO:0009306: protein secretion1.41E-03
24GO:0000302: response to reactive oxygen species1.89E-03
25GO:0031047: gene silencing by RNA1.98E-03
26GO:0006499: N-terminal protein myristoylation3.09E-03
27GO:0010119: regulation of stomatal movement3.20E-03
28GO:0006839: mitochondrial transport3.71E-03
29GO:0008283: cell proliferation4.04E-03
30GO:0031347: regulation of defense response4.60E-03
31GO:0055114: oxidation-reduction process5.17E-03
32GO:0018105: peptidyl-serine phosphorylation6.44E-03
33GO:0006396: RNA processing6.44E-03
34GO:0042742: defense response to bacterium6.66E-03
35GO:0009058: biosynthetic process7.65E-03
36GO:0006413: translational initiation8.79E-03
37GO:0009739: response to gibberellin9.99E-03
38GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process9.99E-03
39GO:0046686: response to cadmium ion1.04E-02
40GO:0048366: leaf development1.41E-02
41GO:0016192: vesicle-mediated transport1.51E-02
42GO:0046777: protein autophosphorylation1.53E-02
43GO:0006886: intracellular protein transport1.70E-02
44GO:0006397: mRNA processing1.99E-02
45GO:0009651: response to salt stress2.25E-02
46GO:0009738: abscisic acid-activated signaling pathway2.83E-02
47GO:0035556: intracellular signal transduction3.01E-02
48GO:0006511: ubiquitin-dependent protein catabolic process3.61E-02
RankGO TermAdjusted P value
1GO:0044610: FMN transmembrane transporter activity0.00E+00
2GO:0008794: arsenate reductase (glutaredoxin) activity8.48E-06
3GO:0015230: FAD transmembrane transporter activity1.48E-05
4GO:0004640: phosphoribosylanthranilate isomerase activity3.88E-05
5GO:0015228: coenzyme A transmembrane transporter activity3.88E-05
6GO:0051724: NAD transporter activity3.88E-05
7GO:0019201: nucleotide kinase activity1.05E-04
8GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances1.45E-04
9GO:0009055: electron carrier activity1.86E-04
10GO:0080122: AMP transmembrane transporter activity1.88E-04
11GO:0036402: proteasome-activating ATPase activity2.34E-04
12GO:0004017: adenylate kinase activity2.82E-04
13GO:0005347: ATP transmembrane transporter activity2.82E-04
14GO:0004656: procollagen-proline 4-dioxygenase activity2.82E-04
15GO:0015217: ADP transmembrane transporter activity2.82E-04
16GO:0051920: peroxiredoxin activity2.82E-04
17GO:0016209: antioxidant activity3.84E-04
18GO:0015035: protein disulfide oxidoreductase activity4.24E-04
19GO:0004521: endoribonuclease activity7.29E-04
20GO:0017025: TBP-class protein binding9.19E-04
21GO:0031418: L-ascorbic acid binding1.05E-03
22GO:0004518: nuclease activity1.98E-03
23GO:0009931: calcium-dependent protein serine/threonine kinase activity2.61E-03
24GO:0004683: calmodulin-dependent protein kinase activity2.70E-03
25GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.40E-03
26GO:0004364: glutathione transferase activity3.93E-03
27GO:0005198: structural molecule activity4.37E-03
28GO:0030246: carbohydrate binding4.44E-03
29GO:0008565: protein transporter activity8.35E-03
30GO:0015297: antiporter activity8.93E-03
31GO:0003743: translation initiation factor activity1.03E-02
32GO:0004601: peroxidase activity1.25E-02
33GO:0016787: hydrolase activity1.43E-02
34GO:0003924: GTPase activity1.93E-02
35GO:0016887: ATPase activity2.63E-02
36GO:0005507: copper ion binding3.73E-02
37GO:0005516: calmodulin binding3.88E-02
38GO:0005525: GTP binding4.14E-02
39GO:0005509: calcium ion binding4.53E-02
40GO:0005506: iron ion binding4.74E-02
RankGO TermAdjusted P value
1GO:0016442: RISC complex1.48E-05
2GO:0046861: glyoxysomal membrane6.95E-05
3GO:0016471: vacuolar proton-transporting V-type ATPase complex1.45E-04
4GO:0030117: membrane coat1.45E-04
5GO:0031597: cytosolic proteasome complex2.82E-04
6GO:0031595: nuclear proteasome complex3.32E-04
7GO:0009514: glyoxysome4.37E-04
8GO:0005779: integral component of peroxisomal membrane4.37E-04
9GO:0010494: cytoplasmic stress granule4.93E-04
10GO:0030665: clathrin-coated vesicle membrane5.49E-04
11GO:0008540: proteasome regulatory particle, base subcomplex5.49E-04
12GO:0030125: clathrin vesicle coat6.08E-04
13GO:0048471: perinuclear region of cytoplasm6.67E-04
14GO:0005758: mitochondrial intermembrane space1.05E-03
15GO:0070469: respiratory chain1.12E-03
16GO:0005773: vacuole1.34E-03
17GO:0005794: Golgi apparatus2.02E-03
18GO:0005778: peroxisomal membrane2.24E-03
19GO:0030529: intracellular ribonucleoprotein complex2.42E-03
20GO:0000932: P-body2.42E-03
21GO:0005774: vacuolar membrane4.15E-03
22GO:0005829: cytosol4.81E-03
23GO:0000502: proteasome complex4.95E-03
24GO:0005635: nuclear envelope5.19E-03
25GO:0005783: endoplasmic reticulum1.01E-02
26GO:0031969: chloroplast membrane1.46E-02
27GO:0005743: mitochondrial inner membrane1.83E-02
28GO:0009507: chloroplast2.41E-02
29GO:0005618: cell wall2.65E-02
30GO:0005737: cytoplasm2.75E-02
31GO:0005777: peroxisome3.20E-02
32GO:0016020: membrane4.30E-02
33GO:0005622: intracellular4.37E-02
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Gene type



Gene DE type