co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G56120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
2	GO:0006907: pinocytosis	0.00E+00
3	GO:0070125: mitochondrial translational elongation	0.00E+00
4	GO:0045014: negative regulation of transcription by glucose	0.00E+00
5	GO:0000819: sister chromatid segregation	0.00E+00
6	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
7	GO:0048497: maintenance of floral organ identity	1.36E-04
8	GO:0006426: glycyl-tRNA aminoacylation	3.78E-04
9	GO:0051013: microtubule severing	3.78E-04
10	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.78E-04
11	GO:0006438: valyl-tRNA aminoacylation	3.78E-04
12	GO:0034214: protein hexamerization	3.78E-04
13	GO:0010583: response to cyclopentenone	6.55E-04
14	GO:0016042: lipid catabolic process	7.77E-04
15	GO:0009786: regulation of asymmetric cell division	8.22E-04
16	GO:2000123: positive regulation of stomatal complex development	8.22E-04
17	GO:1901529: positive regulation of anion channel activity	8.22E-04
18	GO:0061062: regulation of nematode larval development	8.22E-04
19	GO:0006782: protoporphyrinogen IX biosynthetic process	8.60E-04
20	GO:0000910: cytokinesis	8.93E-04
21	GO:0031145: anaphase-promoting complex-dependent catabolic process	1.33E-03
22	GO:0001578: microtubule bundle formation	1.33E-03
23	GO:0045910: negative regulation of DNA recombination	1.33E-03
24	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	1.33E-03
25	GO:0010226: response to lithium ion	1.33E-03
26	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.70E-03
27	GO:0009558: embryo sac cellularization	1.92E-03
28	GO:0010321: regulation of vegetative phase change	1.92E-03
29	GO:0051513: regulation of monopolar cell growth	1.92E-03
30	GO:0030071: regulation of mitotic metaphase/anaphase transition	1.92E-03
31	GO:0007276: gamete generation	1.92E-03
32	GO:0042991: transcription factor import into nucleus	2.58E-03
33	GO:0048629: trichome patterning	2.58E-03
34	GO:0051322: anaphase	2.58E-03
35	GO:2000038: regulation of stomatal complex development	2.58E-03
36	GO:0042127: regulation of cell proliferation	3.14E-03
37	GO:0010091: trichome branching	3.14E-03
38	GO:0007094: mitotic spindle assembly checkpoint	3.30E-03
39	GO:0010375: stomatal complex patterning	3.30E-03
40	GO:0071555: cell wall organization	3.42E-03
41	GO:0048364: root development	3.44E-03
42	GO:0000226: microtubule cytoskeleton organization	3.68E-03
43	GO:0010942: positive regulation of cell death	4.08E-03
44	GO:0016554: cytidine to uridine editing	4.08E-03
45	GO:0009913: epidermal cell differentiation	4.08E-03
46	GO:0007018: microtubule-based movement	4.26E-03
47	GO:0048825: cotyledon development	4.57E-03
48	GO:0009099: valine biosynthetic process	4.92E-03
49	GO:0009082: branched-chain amino acid biosynthetic process	4.92E-03
50	GO:0010444: guard mother cell differentiation	5.81E-03
51	GO:0000712: resolution of meiotic recombination intermediates	5.81E-03
52	GO:0045995: regulation of embryonic development	5.81E-03
53	GO:1900056: negative regulation of leaf senescence	5.81E-03
54	GO:0000082: G1/S transition of mitotic cell cycle	5.81E-03
55	GO:0051726: regulation of cell cycle	6.17E-03
56	GO:0006468: protein phosphorylation	6.38E-03
57	GO:0010492: maintenance of shoot apical meristem identity	6.75E-03
58	GO:0001522: pseudouridine synthesis	6.75E-03
59	GO:0009097: isoleucine biosynthetic process	7.75E-03
60	GO:0009793: embryo development ending in seed dormancy	8.11E-03
61	GO:0015995: chlorophyll biosynthetic process	8.36E-03
62	GO:0048589: developmental growth	8.79E-03
63	GO:0010332: response to gamma radiation	8.79E-03
64	GO:0010311: lateral root formation	9.74E-03
65	GO:0007346: regulation of mitotic cell cycle	9.89E-03
66	GO:0009638: phototropism	9.89E-03
67	GO:0006779: porphyrin-containing compound biosynthetic process	9.89E-03
68	GO:1900865: chloroplast RNA modification	9.89E-03
69	GO:0051301: cell division	1.01E-02
70	GO:0048829: root cap development	1.10E-02
71	GO:0009641: shade avoidance	1.10E-02
72	GO:0006298: mismatch repair	1.10E-02
73	GO:0006949: syncytium formation	1.10E-02
74	GO:0006259: DNA metabolic process	1.10E-02
75	GO:0019538: protein metabolic process	1.10E-02
76	GO:0048229: gametophyte development	1.22E-02
77	GO:0008285: negative regulation of cell proliferation	1.22E-02
78	GO:0006265: DNA topological change	1.22E-02
79	GO:0006312: mitotic recombination	1.34E-02
80	GO:0012501: programmed cell death	1.34E-02
81	GO:0006839: mitochondrial transport	1.34E-02
82	GO:0045037: protein import into chloroplast stroma	1.34E-02
83	GO:0030001: metal ion transport	1.34E-02
84	GO:0010152: pollen maturation	1.34E-02
85	GO:0010102: lateral root morphogenesis	1.47E-02
86	GO:0009785: blue light signaling pathway	1.47E-02
87	GO:0009887: animal organ morphogenesis	1.60E-02
88	GO:0006302: double-strand break repair	1.60E-02
89	GO:0010020: chloroplast fission	1.60E-02
90	GO:0007034: vacuolar transport	1.60E-02
91	GO:0090351: seedling development	1.74E-02
92	GO:0009825: multidimensional cell growth	1.74E-02
93	GO:0006636: unsaturated fatty acid biosynthetic process	1.88E-02
94	GO:0006863: purine nucleobase transport	1.88E-02
95	GO:0009664: plant-type cell wall organization	1.91E-02
96	GO:0009658: chloroplast organization	2.01E-02
97	GO:0080147: root hair cell development	2.02E-02
98	GO:0009736: cytokinin-activated signaling pathway	2.05E-02
99	GO:0019953: sexual reproduction	2.17E-02
100	GO:0006418: tRNA aminoacylation for protein translation	2.17E-02
101	GO:0043622: cortical microtubule organization	2.17E-02
102	GO:0007017: microtubule-based process	2.17E-02
103	GO:0051321: meiotic cell cycle	2.32E-02
104	GO:0009294: DNA mediated transformation	2.64E-02
105	GO:0009686: gibberellin biosynthetic process	2.64E-02
106	GO:0010082: regulation of root meristem growth	2.64E-02
107	GO:0048443: stamen development	2.80E-02
108	GO:0000271: polysaccharide biosynthetic process	3.13E-02
109	GO:0009741: response to brassinosteroid	3.30E-02
110	GO:0045489: pectin biosynthetic process	3.30E-02
111	GO:0009958: positive gravitropism	3.30E-02
112	GO:0045892: negative regulation of transcription, DNA-templated	3.35E-02
113	GO:0007059: chromosome segregation	3.48E-02
114	GO:0071554: cell wall organization or biogenesis	3.83E-02
115	GO:0002229: defense response to oomycetes	3.83E-02
116	GO:0032502: developmental process	4.02E-02
117	GO:0007165: signal transduction	4.07E-02
118	GO:0030163: protein catabolic process	4.21E-02
119	GO:0010090: trichome morphogenesis	4.21E-02
120	GO:0009828: plant-type cell wall loosening	4.40E-02
121	GO:0019760: glucosinolate metabolic process	4.40E-02
122	GO:0007267: cell-cell signaling	4.59E-02
123	GO:0051607: defense response to virus	4.78E-02
124	GO:0040008: regulation of growth	4.80E-02
125	GO:0010027: thylakoid membrane organization	4.98E-02
126	GO:0016126: sterol biosynthetic process	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0047661: amino-acid racemase activity	0.00E+00
2	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
3	GO:0009899: ent-kaurene synthase activity	0.00E+00
4	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	6.42E-06
5	GO:0052689: carboxylic ester hydrolase activity	8.88E-05
6	GO:0004832: valine-tRNA ligase activity	3.78E-04
7	GO:0004820: glycine-tRNA ligase activity	3.78E-04
8	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	3.78E-04
9	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	3.78E-04
10	GO:0004160: dihydroxy-acid dehydratase activity	3.78E-04
11	GO:0008568: microtubule-severing ATPase activity	3.78E-04
12	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	4.60E-04
13	GO:0003777: microtubule motor activity	7.34E-04
14	GO:0004109: coproporphyrinogen oxidase activity	8.22E-04
15	GO:0005515: protein binding	1.53E-03
16	GO:0004674: protein serine/threonine kinase activity	1.60E-03
17	GO:0001872: (1->3)-beta-D-glucan binding	1.92E-03
18	GO:0003916: DNA topoisomerase activity	1.92E-03
19	GO:0042803: protein homodimerization activity	2.40E-03
20	GO:0010011: auxin binding	2.58E-03
21	GO:0016836: hydro-lyase activity	2.58E-03
22	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	2.58E-03
23	GO:0019199: transmembrane receptor protein kinase activity	2.58E-03
24	GO:0008017: microtubule binding	2.64E-03
25	GO:0005524: ATP binding	2.81E-03
26	GO:0009055: electron carrier activity	3.62E-03
27	GO:0004519: endonuclease activity	3.71E-03
28	GO:0030983: mismatched DNA binding	4.08E-03
29	GO:0016853: isomerase activity	4.26E-03
30	GO:0016832: aldehyde-lyase activity	4.92E-03
31	GO:0051753: mannan synthase activity	4.92E-03
32	GO:0016788: hydrolase activity, acting on ester bonds	4.94E-03
33	GO:0016887: ATPase activity	6.89E-03
34	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	7.75E-03
35	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	7.75E-03
36	GO:0016301: kinase activity	8.50E-03
37	GO:0004722: protein serine/threonine phosphatase activity	1.01E-02
38	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.22E-02
39	GO:0009982: pseudouridine synthase activity	1.47E-02
40	GO:0004565: beta-galactosidase activity	1.47E-02
41	GO:0003725: double-stranded RNA binding	1.47E-02
42	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.60E-02
43	GO:0004190: aspartic-type endopeptidase activity	1.74E-02
44	GO:0003712: transcription cofactor activity	1.74E-02
45	GO:0016298: lipase activity	2.13E-02
46	GO:0004672: protein kinase activity	2.14E-02
47	GO:0005345: purine nucleobase transmembrane transporter activity	2.17E-02
48	GO:0004176: ATP-dependent peptidase activity	2.32E-02
49	GO:0008408: 3'-5' exonuclease activity	2.32E-02
50	GO:0004707: MAP kinase activity	2.32E-02
51	GO:0008094: DNA-dependent ATPase activity	2.32E-02
52	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.48E-02
53	GO:0030570: pectate lyase activity	2.64E-02
54	GO:0004650: polygalacturonase activity	2.67E-02
55	GO:0003779: actin binding	2.84E-02
56	GO:0004812: aminoacyl-tRNA ligase activity	2.96E-02
57	GO:0015035: protein disulfide oxidoreductase activity	3.01E-02
58	GO:0001085: RNA polymerase II transcription factor binding	3.30E-02
59	GO:0019901: protein kinase binding	3.66E-02
60	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.83E-02
61	GO:0004518: nuclease activity	4.02E-02
62	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.16E-02
63	GO:0000156: phosphorelay response regulator activity	4.21E-02
64	GO:0051015: actin filament binding	4.21E-02
65	GO:0003684: damaged DNA binding	4.40E-02
66	GO:0016791: phosphatase activity	4.40E-02
67	GO:0005200: structural constituent of cytoskeleton	4.59E-02
68	GO:0008237: metallopeptidase activity	4.59E-02
69	GO:0046983: protein dimerization activity	4.69E-02
70	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.69E-02
71	GO:0005507: copper ion binding	4.72E-02
72	GO:0043565: sequence-specific DNA binding	4.76E-02
73	GO:0016413: O-acetyltransferase activity	4.78E-02
74	GO:0004842: ubiquitin-protein transferase activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0005828: kinetochore microtubule	8.71E-05
3	GO:0000791: euchromatin	3.78E-04
4	GO:0030870: Mre11 complex	8.22E-04
5	GO:0031357: integral component of chloroplast inner membrane	8.22E-04
6	GO:0030139: endocytic vesicle	1.33E-03
7	GO:0005874: microtubule	1.51E-03
8	GO:0009531: secondary cell wall	1.92E-03
9	GO:0032585: multivesicular body membrane	1.92E-03
10	GO:0030286: dynein complex	2.58E-03
11	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	2.58E-03
12	GO:0031897: Tic complex	2.58E-03
13	GO:0000795: synaptonemal complex	3.30E-03
14	GO:0000776: kinetochore	3.30E-03
15	GO:0005871: kinesin complex	3.40E-03
16	GO:0046658: anchored component of plasma membrane	3.78E-03
17	GO:0000793: condensed chromosome	4.08E-03
18	GO:0000777: condensed chromosome kinetochore	4.92E-03
19	GO:0000815: ESCRT III complex	4.92E-03
20	GO:0010369: chromocenter	4.92E-03
21	GO:0009536: plastid	5.33E-03
22	GO:0009986: cell surface	5.81E-03
23	GO:0000794: condensed nuclear chromosome	5.81E-03
24	GO:0000922: spindle pole	8.79E-03
25	GO:0005876: spindle microtubule	9.89E-03
26	GO:0005884: actin filament	1.22E-02
27	GO:0009574: preprophase band	1.47E-02
28	GO:0009508: plastid chromosome	1.47E-02
29	GO:0005886: plasma membrane	1.78E-02
30	GO:0009941: chloroplast envelope	1.82E-02
31	GO:0005875: microtubule associated complex	1.88E-02
32	GO:0031225: anchored component of membrane	1.88E-02
33	GO:0009570: chloroplast stroma	1.90E-02
34	GO:0009532: plastid stroma	2.32E-02
35	GO:0015629: actin cytoskeleton	2.64E-02
36	GO:0009524: phragmoplast	3.86E-02
37	GO:0000785: chromatin	4.02E-02
38	GO:0009295: nucleoid	4.59E-02