co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G55620

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030388: fructose 1,6-bisphosphate metabolic process	5.42E-08
2	GO:0006000: fructose metabolic process	2.11E-07
3	GO:0015995: chlorophyll biosynthetic process	6.71E-06
4	GO:0006002: fructose 6-phosphate metabolic process	9.62E-06
5	GO:0009773: photosynthetic electron transport in photosystem I	2.22E-05
6	GO:0071588: hydrogen peroxide mediated signaling pathway	2.76E-05
7	GO:0006094: gluconeogenesis	3.08E-05
8	GO:0005986: sucrose biosynthetic process	3.08E-05
9	GO:0061077: chaperone-mediated protein folding	6.61E-05
10	GO:0009735: response to cytokinin	9.34E-05
11	GO:0006518: peptide metabolic process	1.23E-04
12	GO:0000302: response to reactive oxygen species	1.46E-04
13	GO:0051085: chaperone mediated protein folding requiring cofactor	1.83E-04
14	GO:0034599: cellular response to oxidative stress	3.77E-04
15	GO:0010019: chloroplast-nucleus signaling pathway	4.69E-04
16	GO:0042026: protein refolding	4.69E-04
17	GO:0009409: response to cold	5.70E-04
18	GO:0055114: oxidation-reduction process	5.90E-04
19	GO:0000105: histidine biosynthetic process	6.32E-04
20	GO:0006783: heme biosynthetic process	8.07E-04
21	GO:0006412: translation	9.57E-04
22	GO:0006782: protoporphyrinogen IX biosynthetic process	9.92E-04
23	GO:0009089: lysine biosynthetic process via diaminopimelate	1.09E-03
24	GO:0009750: response to fructose	1.09E-03
25	GO:0005983: starch catabolic process	1.19E-03
26	GO:0042744: hydrogen peroxide catabolic process	1.21E-03
27	GO:0019253: reductive pentose-phosphate cycle	1.40E-03
28	GO:0005985: sucrose metabolic process	1.50E-03
29	GO:0007005: mitochondrion organization	2.09E-03
30	GO:0035428: hexose transmembrane transport	2.09E-03
31	GO:0042254: ribosome biogenesis	2.26E-03
32	GO:0046323: glucose import	2.74E-03
33	GO:0015979: photosynthesis	3.12E-03
34	GO:0006810: transport	3.77E-03
35	GO:0009627: systemic acquired resistance	4.38E-03
36	GO:0016311: dephosphorylation	4.70E-03
37	GO:0008219: cell death	4.87E-03
38	GO:0007568: aging	5.38E-03
39	GO:0009631: cold acclimation	5.38E-03
40	GO:0045454: cell redox homeostasis	2.86E-02
41	GO:0032259: methylation	3.22E-02
42	GO:0006629: lipid metabolic process	3.32E-02
43	GO:0009793: embryo development ending in seed dormancy	3.35E-02

Rank	GO Term	Adjusted P value
1	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
2	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
3	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	5.42E-08
4	GO:0005528: FK506 binding	5.09E-07
5	GO:0019843: rRNA binding	2.25E-06
6	GO:0004130: cytochrome-c peroxidase activity	2.69E-06
7	GO:0044183: protein binding involved in protein folding	2.22E-05
8	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.35E-05
9	GO:0003879: ATP phosphoribosyltransferase activity	2.76E-05
10	GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity	2.76E-05
11	GO:0004853: uroporphyrinogen decarboxylase activity	2.76E-05
12	GO:0018708: thiol S-methyltransferase activity	7.01E-05
13	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	7.01E-05
14	GO:0070402: NADPH binding	1.23E-04
15	GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity	1.23E-04
16	GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity	1.23E-04
17	GO:0010277: chlorophyllide a oxygenase [overall] activity	1.23E-04
18	GO:0003735: structural constituent of ribosome	1.63E-04
19	GO:0019201: nucleotide kinase activity	1.83E-04
20	GO:0016688: L-ascorbate peroxidase activity	3.92E-04
21	GO:0004017: adenylate kinase activity	4.69E-04
22	GO:0051920: peroxiredoxin activity	4.69E-04
23	GO:0016209: antioxidant activity	6.32E-04
24	GO:0004033: aldo-keto reductase (NADP) activity	6.32E-04
25	GO:0047617: acyl-CoA hydrolase activity	8.99E-04
26	GO:0004601: peroxidase activity	2.22E-03
27	GO:0005355: glucose transmembrane transporter activity	2.88E-03
28	GO:0048038: quinone binding	3.16E-03
29	GO:0004222: metalloendopeptidase activity	5.21E-03
30	GO:0051537: 2 iron, 2 sulfur cluster binding	7.20E-03
31	GO:0051082: unfolded protein binding	1.07E-02
32	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.28E-02
33	GO:0015144: carbohydrate transmembrane transporter activity	1.43E-02
34	GO:0005351: sugar:proton symporter activity	1.56E-02
35	GO:0016491: oxidoreductase activity	1.91E-02
36	GO:0008168: methyltransferase activity	2.10E-02
37	GO:0000287: magnesium ion binding	2.13E-02
38	GO:0016788: hydrolase activity, acting on ester bonds	2.19E-02
39	GO:0020037: heme binding	2.29E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	4.72E-23
2	GO:0009535: chloroplast thylakoid membrane	2.27E-13
3	GO:0009534: chloroplast thylakoid	2.74E-13
4	GO:0009570: chloroplast stroma	5.36E-12
5	GO:0009941: chloroplast envelope	1.67E-11
6	GO:0009579: thylakoid	1.70E-08
7	GO:0009543: chloroplast thylakoid lumen	4.20E-08
8	GO:0031977: thylakoid lumen	2.63E-07
9	GO:0010319: stromule	4.13E-06
10	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.22E-05
11	GO:0005840: ribosome	3.84E-04
12	GO:0042651: thylakoid membrane	1.85E-03
13	GO:0015935: small ribosomal subunit	1.97E-03
14	GO:0031969: chloroplast membrane	2.74E-03
15	GO:0015934: large ribosomal subunit	5.38E-03
16	GO:0022626: cytosolic ribosome	6.81E-03
17	GO:0009706: chloroplast inner membrane	1.07E-02
18	GO:0048046: apoplast	1.19E-02
19	GO:0010287: plastoglobule	1.21E-02
20	GO:0022625: cytosolic large ribosomal subunit	2.61E-02