Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G54780

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071327: cellular response to trehalose stimulus0.00E+00
2GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
3GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
4GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
5GO:1900367: positive regulation of defense response to insect0.00E+00
6GO:0002764: immune response-regulating signaling pathway0.00E+00
7GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
8GO:0033587: shikimate biosynthetic process0.00E+00
9GO:0010324: membrane invagination0.00E+00
10GO:0032499: detection of peptidoglycan0.00E+00
11GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
12GO:0031348: negative regulation of defense response8.10E-07
13GO:0060548: negative regulation of cell death1.15E-06
14GO:0010200: response to chitin2.34E-06
15GO:0019725: cellular homeostasis8.37E-06
16GO:0006952: defense response1.17E-05
17GO:0010150: leaf senescence1.80E-05
18GO:0009751: response to salicylic acid6.11E-05
19GO:0045227: capsule polysaccharide biosynthetic process1.10E-04
20GO:0033358: UDP-L-arabinose biosynthetic process1.10E-04
21GO:0046777: protein autophosphorylation1.42E-04
22GO:0010225: response to UV-C1.69E-04
23GO:0009697: salicylic acid biosynthetic process1.69E-04
24GO:0006468: protein phosphorylation2.16E-04
25GO:0009643: photosynthetic acclimation2.41E-04
26GO:0042372: phylloquinone biosynthetic process3.24E-04
27GO:0009611: response to wounding3.47E-04
28GO:0071456: cellular response to hypoxia3.52E-04
29GO:0009625: response to insect3.95E-04
30GO:0048508: embryonic meristem development4.34E-04
31GO:0051938: L-glutamate import4.34E-04
32GO:0015760: glucose-6-phosphate transport4.34E-04
33GO:0046256: 2,4,6-trinitrotoluene catabolic process4.34E-04
34GO:0019567: arabinose biosynthetic process4.34E-04
35GO:0010421: hydrogen peroxide-mediated programmed cell death4.34E-04
36GO:1901183: positive regulation of camalexin biosynthetic process4.34E-04
37GO:0009270: response to humidity4.34E-04
38GO:0032491: detection of molecule of fungal origin4.34E-04
39GO:0042759: long-chain fatty acid biosynthetic process4.34E-04
40GO:0051707: response to other organism5.44E-04
41GO:2000031: regulation of salicylic acid mediated signaling pathway6.37E-04
42GO:0090333: regulation of stomatal closure7.63E-04
43GO:1900426: positive regulation of defense response to bacterium8.99E-04
44GO:0015802: basic amino acid transport9.39E-04
45GO:0010618: aerenchyma formation9.39E-04
46GO:0010115: regulation of abscisic acid biosynthetic process9.39E-04
47GO:0015865: purine nucleotide transport9.39E-04
48GO:0044419: interspecies interaction between organisms9.39E-04
49GO:0009945: radial axis specification9.39E-04
50GO:0010271: regulation of chlorophyll catabolic process9.39E-04
51GO:0015712: hexose phosphate transport9.39E-04
52GO:0043091: L-arginine import9.39E-04
53GO:0006123: mitochondrial electron transport, cytochrome c to oxygen9.39E-04
54GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.39E-04
55GO:0009626: plant-type hypersensitive response1.21E-03
56GO:0006950: response to stress1.52E-03
57GO:0015714: phosphoenolpyruvate transport1.53E-03
58GO:1900055: regulation of leaf senescence1.53E-03
59GO:0007165: signal transduction1.53E-03
60GO:0006954: inflammatory response1.53E-03
61GO:0010498: proteasomal protein catabolic process1.53E-03
62GO:0034051: negative regulation of plant-type hypersensitive response1.53E-03
63GO:0016045: detection of bacterium1.53E-03
64GO:1900140: regulation of seedling development1.53E-03
65GO:0010359: regulation of anion channel activity1.53E-03
66GO:0035436: triose phosphate transmembrane transport1.53E-03
67GO:0045793: positive regulation of cell size1.53E-03
68GO:0045836: positive regulation of meiotic nuclear division1.53E-03
69GO:0010186: positive regulation of cellular defense response1.53E-03
70GO:0009266: response to temperature stimulus1.76E-03
71GO:0009225: nucleotide-sugar metabolic process1.98E-03
72GO:0010167: response to nitrate1.98E-03
73GO:0046902: regulation of mitochondrial membrane permeability2.21E-03
74GO:0072583: clathrin-dependent endocytosis2.21E-03
75GO:0071323: cellular response to chitin2.21E-03
76GO:0051289: protein homotetramerization2.21E-03
77GO:0046513: ceramide biosynthetic process2.21E-03
78GO:0046836: glycolipid transport2.21E-03
79GO:0048194: Golgi vesicle budding2.21E-03
80GO:2000377: regulation of reactive oxygen species metabolic process2.45E-03
81GO:0010483: pollen tube reception2.97E-03
82GO:0045088: regulation of innate immune response2.97E-03
83GO:0071219: cellular response to molecule of bacterial origin2.97E-03
84GO:0010508: positive regulation of autophagy2.97E-03
85GO:0015713: phosphoglycerate transport2.97E-03
86GO:0080142: regulation of salicylic acid biosynthetic process2.97E-03
87GO:0009694: jasmonic acid metabolic process2.97E-03
88GO:0010109: regulation of photosynthesis2.97E-03
89GO:0006012: galactose metabolic process3.55E-03
90GO:0018344: protein geranylgeranylation3.80E-03
91GO:0045927: positive regulation of growth3.80E-03
92GO:0034052: positive regulation of plant-type hypersensitive response3.80E-03
93GO:0009164: nucleoside catabolic process3.80E-03
94GO:0009737: response to abscisic acid4.29E-03
95GO:0010264: myo-inositol hexakisphosphate biosynthetic process4.71E-03
96GO:1900425: negative regulation of defense response to bacterium4.71E-03
97GO:0010337: regulation of salicylic acid metabolic process4.71E-03
98GO:0018258: protein O-linked glycosylation via hydroxyproline4.71E-03
99GO:0002238: response to molecule of fungal origin4.71E-03
100GO:0010942: positive regulation of cell death4.71E-03
101GO:0010405: arabinogalactan protein metabolic process4.71E-03
102GO:0006486: protein glycosylation4.75E-03
103GO:0009753: response to jasmonic acid5.21E-03
104GO:0042742: defense response to bacterium5.39E-03
105GO:0006979: response to oxidative stress5.48E-03
106GO:0009749: response to glucose5.63E-03
107GO:0010310: regulation of hydrogen peroxide metabolic process5.68E-03
108GO:0071470: cellular response to osmotic stress5.68E-03
109GO:0045926: negative regulation of growth5.68E-03
110GO:0009942: longitudinal axis specification5.68E-03
111GO:0010193: response to ozone6.03E-03
112GO:0071446: cellular response to salicylic acid stimulus6.71E-03
113GO:1900056: negative regulation of leaf senescence6.71E-03
114GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c6.71E-03
115GO:0050829: defense response to Gram-negative bacterium6.71E-03
116GO:0009624: response to nematode7.47E-03
117GO:0006904: vesicle docking involved in exocytosis7.77E-03
118GO:0010928: regulation of auxin mediated signaling pathway7.81E-03
119GO:0009787: regulation of abscisic acid-activated signaling pathway7.81E-03
120GO:0009819: drought recovery7.81E-03
121GO:0043068: positive regulation of programmed cell death7.81E-03
122GO:0010099: regulation of photomorphogenesis8.97E-03
123GO:0010204: defense response signaling pathway, resistance gene-independent8.97E-03
124GO:0030968: endoplasmic reticulum unfolded protein response8.97E-03
125GO:0009788: negative regulation of abscisic acid-activated signaling pathway9.24E-03
126GO:0009816: defense response to bacterium, incompatible interaction9.24E-03
127GO:0009627: systemic acquired resistance9.77E-03
128GO:0009051: pentose-phosphate shunt, oxidative branch1.02E-02
129GO:0006098: pentose-phosphate shunt1.02E-02
130GO:0046916: cellular transition metal ion homeostasis1.02E-02
131GO:0010112: regulation of systemic acquired resistance1.02E-02
132GO:0009056: catabolic process1.02E-02
133GO:0009409: response to cold1.03E-02
134GO:0048268: clathrin coat assembly1.15E-02
135GO:0048354: mucilage biosynthetic process involved in seed coat development1.15E-02
136GO:0010380: regulation of chlorophyll biosynthetic process1.15E-02
137GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.15E-02
138GO:0008202: steroid metabolic process1.15E-02
139GO:0009407: toxin catabolic process1.26E-02
140GO:0007064: mitotic sister chromatid cohesion1.28E-02
141GO:0010119: regulation of stomatal movement1.32E-02
142GO:0007568: aging1.32E-02
143GO:0035556: intracellular signal transduction1.38E-02
144GO:0009682: induced systemic resistance1.42E-02
145GO:0072593: reactive oxygen species metabolic process1.42E-02
146GO:0009867: jasmonic acid mediated signaling pathway1.45E-02
147GO:0045087: innate immune response1.45E-02
148GO:0009414: response to water deprivation1.46E-02
149GO:0008361: regulation of cell size1.56E-02
150GO:0012501: programmed cell death1.56E-02
151GO:0015706: nitrate transport1.56E-02
152GO:0002213: defense response to insect1.56E-02
153GO:0010105: negative regulation of ethylene-activated signaling pathway1.56E-02
154GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.56E-02
155GO:0009408: response to heat1.65E-02
156GO:0006006: glucose metabolic process1.71E-02
157GO:2000028: regulation of photoperiodism, flowering1.71E-02
158GO:0055046: microgametogenesis1.71E-02
159GO:0006897: endocytosis1.73E-02
160GO:0006887: exocytosis1.73E-02
161GO:0006470: protein dephosphorylation1.78E-02
162GO:0007166: cell surface receptor signaling pathway1.78E-02
163GO:0034605: cellular response to heat1.86E-02
164GO:0007034: vacuolar transport1.86E-02
165GO:0010540: basipetal auxin transport1.86E-02
166GO:0009617: response to bacterium1.88E-02
167GO:0009744: response to sucrose1.88E-02
168GO:0046688: response to copper ion2.02E-02
169GO:0046854: phosphatidylinositol phosphorylation2.02E-02
170GO:0009636: response to toxic substance2.11E-02
171GO:0006855: drug transmembrane transport2.19E-02
172GO:0080147: root hair cell development2.35E-02
173GO:0006874: cellular calcium ion homeostasis2.52E-02
174GO:0006825: copper ion transport2.52E-02
175GO:0009809: lignin biosynthetic process2.53E-02
176GO:0009269: response to desiccation2.70E-02
177GO:0051321: meiotic cell cycle2.70E-02
178GO:0003333: amino acid transmembrane transport2.70E-02
179GO:0010017: red or far-red light signaling pathway2.87E-02
180GO:0016226: iron-sulfur cluster assembly2.87E-02
181GO:2000022: regulation of jasmonic acid mediated signaling pathway2.87E-02
182GO:0009561: megagametogenesis3.25E-02
183GO:0009620: response to fungus3.29E-02
184GO:0042147: retrograde transport, endosome to Golgi3.44E-02
185GO:0010118: stomatal movement3.63E-02
186GO:0042631: cellular response to water deprivation3.63E-02
187GO:0042391: regulation of membrane potential3.63E-02
188GO:0000271: polysaccharide biosynthetic process3.63E-02
189GO:0009742: brassinosteroid mediated signaling pathway3.82E-02
190GO:0006885: regulation of pH3.83E-02
191GO:0045489: pectin biosynthetic process3.83E-02
192GO:0009416: response to light stimulus3.84E-02
193GO:0009646: response to absence of light4.03E-02
194GO:0008654: phospholipid biosynthetic process4.24E-02
195GO:0000302: response to reactive oxygen species4.45E-02
196GO:0002229: defense response to oomycetes4.45E-02
197GO:0006891: intra-Golgi vesicle-mediated transport4.45E-02
198GO:0007264: small GTPase mediated signal transduction4.66E-02
199GO:0016032: viral process4.66E-02
200GO:0019761: glucosinolate biosynthetic process4.66E-02
201GO:0048235: pollen sperm cell differentiation4.66E-02
202GO:0009630: gravitropism4.66E-02
RankGO TermAdjusted P value
1GO:0004168: dolichol kinase activity0.00E+00
2GO:0080131: hydroxyjasmonate sulfotransferase activity0.00E+00
3GO:0005212: structural constituent of eye lens0.00E+00
4GO:2001080: chitosan binding0.00E+00
5GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
6GO:0016301: kinase activity4.73E-06
7GO:0004674: protein serine/threonine kinase activity2.14E-05
8GO:0019199: transmembrane receptor protein kinase activity1.10E-04
9GO:0050373: UDP-arabinose 4-epimerase activity1.10E-04
10GO:0004012: phospholipid-translocating ATPase activity3.24E-04
11GO:0003978: UDP-glucose 4-epimerase activity3.24E-04
12GO:0032050: clathrin heavy chain binding4.34E-04
13GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.34E-04
14GO:0004662: CAAX-protein geranylgeranyltransferase activity4.34E-04
15GO:0008909: isochorismate synthase activity4.34E-04
16GO:0019707: protein-cysteine S-acyltransferase activity4.34E-04
17GO:0019901: protein kinase binding7.16E-04
18GO:0015152: glucose-6-phosphate transmembrane transporter activity9.39E-04
19GO:0022821: potassium ion antiporter activity9.39E-04
20GO:0001671: ATPase activator activity9.39E-04
21GO:0048531: beta-1,3-galactosyltransferase activity9.39E-04
22GO:0050291: sphingosine N-acyltransferase activity9.39E-04
23GO:0047364: desulfoglucosinolate sulfotransferase activity9.39E-04
24GO:0008559: xenobiotic-transporting ATPase activity1.20E-03
25GO:0005509: calcium ion binding1.51E-03
26GO:0004324: ferredoxin-NADP+ reductase activity1.53E-03
27GO:0016531: copper chaperone activity1.53E-03
28GO:0071917: triose-phosphate transmembrane transporter activity1.53E-03
29GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.56E-03
30GO:0005524: ATP binding1.78E-03
31GO:0008146: sulfotransferase activity1.98E-03
32GO:0015189: L-lysine transmembrane transporter activity2.21E-03
33GO:0017089: glycolipid transporter activity2.21E-03
34GO:0015181: arginine transmembrane transporter activity2.21E-03
35GO:0043424: protein histidine kinase binding2.70E-03
36GO:0004737: pyruvate decarboxylase activity2.97E-03
37GO:0004345: glucose-6-phosphate dehydrogenase activity2.97E-03
38GO:0051861: glycolipid binding2.97E-03
39GO:0005313: L-glutamate transmembrane transporter activity2.97E-03
40GO:0033612: receptor serine/threonine kinase binding2.97E-03
41GO:0015120: phosphoglycerate transmembrane transporter activity2.97E-03
42GO:0019706: protein-cysteine S-palmitoyltransferase activity2.97E-03
43GO:0047631: ADP-ribose diphosphatase activity3.80E-03
44GO:0005471: ATP:ADP antiporter activity3.80E-03
45GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.80E-03
46GO:0004672: protein kinase activity4.57E-03
47GO:0030976: thiamine pyrophosphate binding4.71E-03
48GO:0004605: phosphatidate cytidylyltransferase activity4.71E-03
49GO:1990714: hydroxyproline O-galactosyltransferase activity4.71E-03
50GO:0000210: NAD+ diphosphatase activity4.71E-03
51GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides5.68E-03
52GO:0003950: NAD+ ADP-ribosyltransferase activity5.68E-03
53GO:0004197: cysteine-type endopeptidase activity6.44E-03
54GO:0016831: carboxy-lyase activity6.71E-03
55GO:0043295: glutathione binding6.71E-03
56GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity7.77E-03
57GO:0005544: calcium-dependent phospholipid binding7.81E-03
58GO:0004714: transmembrane receptor protein tyrosine kinase activity7.81E-03
59GO:0008142: oxysterol binding8.97E-03
60GO:0004430: 1-phosphatidylinositol 4-kinase activity8.97E-03
61GO:0004806: triglyceride lipase activity1.03E-02
62GO:0015174: basic amino acid transmembrane transporter activity1.15E-02
63GO:0047617: acyl-CoA hydrolase activity1.15E-02
64GO:0015112: nitrate transmembrane transporter activity1.15E-02
65GO:0015238: drug transmembrane transporter activity1.20E-02
66GO:0008171: O-methyltransferase activity1.28E-02
67GO:0005545: 1-phosphatidylinositol binding1.28E-02
68GO:0004568: chitinase activity1.28E-02
69GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.37E-02
70GO:0005515: protein binding1.37E-02
71GO:0015297: antiporter activity1.42E-02
72GO:0005543: phospholipid binding1.42E-02
73GO:0008378: galactosyltransferase activity1.56E-02
74GO:0004521: endoribonuclease activity1.56E-02
75GO:0005315: inorganic phosphate transmembrane transporter activity1.71E-02
76GO:0031072: heat shock protein binding1.71E-02
77GO:0004364: glutathione transferase activity1.80E-02
78GO:0030553: cGMP binding2.02E-02
79GO:0008061: chitin binding2.02E-02
80GO:0004970: ionotropic glutamate receptor activity2.02E-02
81GO:0005217: intracellular ligand-gated ion channel activity2.02E-02
82GO:0004190: aspartic-type endopeptidase activity2.02E-02
83GO:0030552: cAMP binding2.02E-02
84GO:0003954: NADH dehydrogenase activity2.35E-02
85GO:0051087: chaperone binding2.52E-02
86GO:0005216: ion channel activity2.52E-02
87GO:0000287: magnesium ion binding2.55E-02
88GO:0016298: lipase activity2.62E-02
89GO:0016787: hydrolase activity2.70E-02
90GO:0004707: MAP kinase activity2.70E-02
91GO:0004842: ubiquitin-protein transferase activity2.82E-02
92GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.87E-02
93GO:0043531: ADP binding2.92E-02
94GO:0030551: cyclic nucleotide binding3.63E-02
95GO:0005451: monovalent cation:proton antiporter activity3.63E-02
96GO:0005249: voltage-gated potassium channel activity3.63E-02
97GO:0030276: clathrin binding3.83E-02
98GO:0005199: structural constituent of cell wall3.83E-02
99GO:0015299: solute:proton antiporter activity4.03E-02
100GO:0016758: transferase activity, transferring hexosyl groups4.38E-02
101GO:0004722: protein serine/threonine phosphatase activity4.76E-02
102GO:0015385: sodium:proton antiporter activity4.88E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane2.40E-09
2GO:0005901: caveola8.37E-06
3GO:0016021: integral component of membrane2.43E-05
4GO:0005758: mitochondrial intermembrane space2.38E-04
5GO:0005953: CAAX-protein geranylgeranyltransferase complex4.34E-04
6GO:0000138: Golgi trans cisterna4.34E-04
7GO:0031304: intrinsic component of mitochondrial inner membrane9.39E-04
8GO:0042406: extrinsic component of endoplasmic reticulum membrane1.53E-03
9GO:0008287: protein serine/threonine phosphatase complex1.53E-03
10GO:0030139: endocytic vesicle1.53E-03
11GO:0009530: primary cell wall1.53E-03
12GO:0031012: extracellular matrix1.56E-03
13GO:0070062: extracellular exosome2.21E-03
14GO:0000813: ESCRT I complex3.80E-03
15GO:0016363: nuclear matrix5.68E-03
16GO:0000145: exocyst6.44E-03
17GO:0032580: Golgi cisterna membrane7.31E-03
18GO:0005740: mitochondrial envelope1.28E-02
19GO:0030125: clathrin vesicle coat1.28E-02
20GO:0000325: plant-type vacuole1.32E-02
21GO:0005578: proteinaceous extracellular matrix1.71E-02
22GO:0030176: integral component of endoplasmic reticulum membrane2.02E-02
23GO:0005794: Golgi apparatus2.14E-02
24GO:0005769: early endosome2.18E-02
25GO:0070469: respiratory chain2.52E-02
26GO:0005905: clathrin-coated pit2.70E-02
27GO:0005774: vacuolar membrane3.24E-02
28GO:0030136: clathrin-coated vesicle3.44E-02
29GO:0005770: late endosome3.83E-02
30GO:0005737: cytoplasm4.13E-02
31GO:0005777: peroxisome4.68E-02
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Gene type



Gene DE type