GO Enrichment Analysis of Co-expressed Genes with
AT5G54770
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
2 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
3 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
4 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
5 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
6 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
7 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.81E-08 |
8 | GO:0010027: thylakoid membrane organization | 1.35E-05 |
9 | GO:0015979: photosynthesis | 3.96E-05 |
10 | GO:0009791: post-embryonic development | 1.30E-04 |
11 | GO:0032544: plastid translation | 1.75E-04 |
12 | GO:0031998: regulation of fatty acid beta-oxidation | 1.80E-04 |
13 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.80E-04 |
14 | GO:0043953: protein transport by the Tat complex | 1.80E-04 |
15 | GO:0006659: phosphatidylserine biosynthetic process | 1.80E-04 |
16 | GO:0065002: intracellular protein transmembrane transport | 1.80E-04 |
17 | GO:0080093: regulation of photorespiration | 1.80E-04 |
18 | GO:0006098: pentose-phosphate shunt | 2.13E-04 |
19 | GO:0055114: oxidation-reduction process | 2.51E-04 |
20 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.48E-04 |
21 | GO:0051645: Golgi localization | 4.05E-04 |
22 | GO:0034755: iron ion transmembrane transport | 4.05E-04 |
23 | GO:0071457: cellular response to ozone | 4.05E-04 |
24 | GO:0060151: peroxisome localization | 4.05E-04 |
25 | GO:0006094: gluconeogenesis | 4.55E-04 |
26 | GO:0048467: gynoecium development | 5.13E-04 |
27 | GO:0010114: response to red light | 6.46E-04 |
28 | GO:0051646: mitochondrion localization | 6.61E-04 |
29 | GO:0006954: inflammatory response | 6.61E-04 |
30 | GO:0090436: leaf pavement cell development | 6.61E-04 |
31 | GO:0006810: transport | 7.25E-04 |
32 | GO:0006166: purine ribonucleoside salvage | 9.45E-04 |
33 | GO:0071484: cellular response to light intensity | 9.45E-04 |
34 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 9.45E-04 |
35 | GO:0006168: adenine salvage | 9.45E-04 |
36 | GO:0009735: response to cytokinin | 1.11E-03 |
37 | GO:0006096: glycolytic process | 1.15E-03 |
38 | GO:0019676: ammonia assimilation cycle | 1.25E-03 |
39 | GO:0071486: cellular response to high light intensity | 1.25E-03 |
40 | GO:0009765: photosynthesis, light harvesting | 1.25E-03 |
41 | GO:0006109: regulation of carbohydrate metabolic process | 1.25E-03 |
42 | GO:0010107: potassium ion import | 1.25E-03 |
43 | GO:0006546: glycine catabolic process | 1.25E-03 |
44 | GO:0006021: inositol biosynthetic process | 1.25E-03 |
45 | GO:0006542: glutamine biosynthetic process | 1.25E-03 |
46 | GO:0019252: starch biosynthetic process | 1.57E-03 |
47 | GO:0006097: glyoxylate cycle | 1.59E-03 |
48 | GO:0044209: AMP salvage | 1.59E-03 |
49 | GO:0071493: cellular response to UV-B | 1.59E-03 |
50 | GO:0046907: intracellular transport | 1.59E-03 |
51 | GO:0098719: sodium ion import across plasma membrane | 1.59E-03 |
52 | GO:0006564: L-serine biosynthetic process | 1.59E-03 |
53 | GO:0010236: plastoquinone biosynthetic process | 1.59E-03 |
54 | GO:0000278: mitotic cell cycle | 1.59E-03 |
55 | GO:0006751: glutathione catabolic process | 1.96E-03 |
56 | GO:0042549: photosystem II stabilization | 1.96E-03 |
57 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.96E-03 |
58 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.96E-03 |
59 | GO:0009228: thiamine biosynthetic process | 1.96E-03 |
60 | GO:0009955: adaxial/abaxial pattern specification | 2.35E-03 |
61 | GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity | 2.35E-03 |
62 | GO:1901259: chloroplast rRNA processing | 2.35E-03 |
63 | GO:0010189: vitamin E biosynthetic process | 2.35E-03 |
64 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.77E-03 |
65 | GO:0009645: response to low light intensity stimulus | 2.77E-03 |
66 | GO:0015995: chlorophyll biosynthetic process | 2.84E-03 |
67 | GO:0046686: response to cadmium ion | 2.86E-03 |
68 | GO:0048564: photosystem I assembly | 3.21E-03 |
69 | GO:0010078: maintenance of root meristem identity | 3.21E-03 |
70 | GO:0055075: potassium ion homeostasis | 3.21E-03 |
71 | GO:0017004: cytochrome complex assembly | 3.67E-03 |
72 | GO:0071482: cellular response to light stimulus | 3.67E-03 |
73 | GO:0019430: removal of superoxide radicals | 3.67E-03 |
74 | GO:0009657: plastid organization | 3.67E-03 |
75 | GO:0043562: cellular response to nitrogen levels | 3.67E-03 |
76 | GO:0009821: alkaloid biosynthetic process | 4.15E-03 |
77 | GO:0090333: regulation of stomatal closure | 4.15E-03 |
78 | GO:0051453: regulation of intracellular pH | 4.65E-03 |
79 | GO:0005982: starch metabolic process | 4.65E-03 |
80 | GO:0007346: regulation of mitotic cell cycle | 4.65E-03 |
81 | GO:0009658: chloroplast organization | 5.04E-03 |
82 | GO:0006949: syncytium formation | 5.18E-03 |
83 | GO:0009684: indoleacetic acid biosynthetic process | 5.72E-03 |
84 | GO:0009773: photosynthetic electron transport in photosystem I | 5.72E-03 |
85 | GO:0019684: photosynthesis, light reaction | 5.72E-03 |
86 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.72E-03 |
87 | GO:0006415: translational termination | 5.72E-03 |
88 | GO:0043085: positive regulation of catalytic activity | 5.72E-03 |
89 | GO:0006879: cellular iron ion homeostasis | 5.72E-03 |
90 | GO:0016024: CDP-diacylglycerol biosynthetic process | 6.28E-03 |
91 | GO:0009767: photosynthetic electron transport chain | 6.86E-03 |
92 | GO:0010588: cotyledon vascular tissue pattern formation | 6.86E-03 |
93 | GO:0030048: actin filament-based movement | 6.86E-03 |
94 | GO:0006108: malate metabolic process | 6.86E-03 |
95 | GO:0010143: cutin biosynthetic process | 7.46E-03 |
96 | GO:0010020: chloroplast fission | 7.46E-03 |
97 | GO:0010207: photosystem II assembly | 7.46E-03 |
98 | GO:0019253: reductive pentose-phosphate cycle | 7.46E-03 |
99 | GO:0019853: L-ascorbic acid biosynthetic process | 8.08E-03 |
100 | GO:0042023: DNA endoreduplication | 8.71E-03 |
101 | GO:0007017: microtubule-based process | 1.00E-02 |
102 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.00E-02 |
103 | GO:0019915: lipid storage | 1.07E-02 |
104 | GO:0061077: chaperone-mediated protein folding | 1.07E-02 |
105 | GO:0009269: response to desiccation | 1.07E-02 |
106 | GO:0016114: terpenoid biosynthetic process | 1.07E-02 |
107 | GO:0016226: iron-sulfur cluster assembly | 1.14E-02 |
108 | GO:0006012: galactose metabolic process | 1.22E-02 |
109 | GO:0009686: gibberellin biosynthetic process | 1.22E-02 |
110 | GO:0009561: megagametogenesis | 1.29E-02 |
111 | GO:0016117: carotenoid biosynthetic process | 1.37E-02 |
112 | GO:0051028: mRNA transport | 1.37E-02 |
113 | GO:0042335: cuticle development | 1.44E-02 |
114 | GO:0080022: primary root development | 1.44E-02 |
115 | GO:0010087: phloem or xylem histogenesis | 1.44E-02 |
116 | GO:0010268: brassinosteroid homeostasis | 1.52E-02 |
117 | GO:0071472: cellular response to salt stress | 1.52E-02 |
118 | GO:0009958: positive gravitropism | 1.52E-02 |
119 | GO:0010154: fruit development | 1.52E-02 |
120 | GO:0006885: regulation of pH | 1.52E-02 |
121 | GO:0006662: glycerol ether metabolic process | 1.52E-02 |
122 | GO:0006633: fatty acid biosynthetic process | 1.55E-02 |
123 | GO:0006814: sodium ion transport | 1.60E-02 |
124 | GO:0009851: auxin biosynthetic process | 1.68E-02 |
125 | GO:0048825: cotyledon development | 1.68E-02 |
126 | GO:0008654: phospholipid biosynthetic process | 1.68E-02 |
127 | GO:0016132: brassinosteroid biosynthetic process | 1.77E-02 |
128 | GO:0010090: trichome morphogenesis | 1.94E-02 |
129 | GO:0009567: double fertilization forming a zygote and endosperm | 2.03E-02 |
130 | GO:0016125: sterol metabolic process | 2.03E-02 |
131 | GO:0009828: plant-type cell wall loosening | 2.03E-02 |
132 | GO:0042128: nitrate assimilation | 2.48E-02 |
133 | GO:0051301: cell division | 2.51E-02 |
134 | GO:0009409: response to cold | 2.51E-02 |
135 | GO:0016311: dephosphorylation | 2.68E-02 |
136 | GO:0016049: cell growth | 2.68E-02 |
137 | GO:0009817: defense response to fungus, incompatible interaction | 2.77E-02 |
138 | GO:0018298: protein-chromophore linkage | 2.77E-02 |
139 | GO:0010218: response to far red light | 2.97E-02 |
140 | GO:0007568: aging | 3.08E-02 |
141 | GO:0048527: lateral root development | 3.08E-02 |
142 | GO:0010119: regulation of stomatal movement | 3.08E-02 |
143 | GO:0009637: response to blue light | 3.28E-02 |
144 | GO:0006099: tricarboxylic acid cycle | 3.39E-02 |
145 | GO:0034599: cellular response to oxidative stress | 3.39E-02 |
146 | GO:0051707: response to other organism | 3.93E-02 |
147 | GO:0009644: response to high light intensity | 4.16E-02 |
148 | GO:0006855: drug transmembrane transport | 4.39E-02 |
149 | GO:0032259: methylation | 4.61E-02 |
150 | GO:0009664: plant-type cell wall organization | 4.62E-02 |
151 | GO:0016042: lipid catabolic process | 4.68E-02 |
152 | GO:0006486: protein glycosylation | 4.86E-02 |
153 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.98E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
2 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
3 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
4 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
5 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.12E-07 |
6 | GO:0009011: starch synthase activity | 1.12E-07 |
7 | GO:0004332: fructose-bisphosphate aldolase activity | 5.89E-05 |
8 | GO:0004033: aldo-keto reductase (NADP) activity | 1.40E-04 |
9 | GO:0048038: quinone binding | 1.44E-04 |
10 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.80E-04 |
11 | GO:0051777: ent-kaurenoate oxidase activity | 1.80E-04 |
12 | GO:0009374: biotin binding | 1.80E-04 |
13 | GO:0004328: formamidase activity | 1.80E-04 |
14 | GO:0004618: phosphoglycerate kinase activity | 4.05E-04 |
15 | GO:0003839: gamma-glutamylcyclotransferase activity | 4.05E-04 |
16 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 4.05E-04 |
17 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 4.05E-04 |
18 | GO:0004617: phosphoglycerate dehydrogenase activity | 4.05E-04 |
19 | GO:0004047: aminomethyltransferase activity | 4.05E-04 |
20 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 4.05E-04 |
21 | GO:0033201: alpha-1,4-glucan synthase activity | 4.05E-04 |
22 | GO:0004312: fatty acid synthase activity | 4.05E-04 |
23 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 4.05E-04 |
24 | GO:0004512: inositol-3-phosphate synthase activity | 4.05E-04 |
25 | GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity | 4.05E-04 |
26 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 4.05E-04 |
27 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 6.61E-04 |
28 | GO:0004373: glycogen (starch) synthase activity | 6.61E-04 |
29 | GO:0004751: ribose-5-phosphate isomerase activity | 6.61E-04 |
30 | GO:0070402: NADPH binding | 6.61E-04 |
31 | GO:0005528: FK506 binding | 7.06E-04 |
32 | GO:0003999: adenine phosphoribosyltransferase activity | 9.45E-04 |
33 | GO:0016851: magnesium chelatase activity | 9.45E-04 |
34 | GO:0016149: translation release factor activity, codon specific | 9.45E-04 |
35 | GO:0003883: CTP synthase activity | 9.45E-04 |
36 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 9.45E-04 |
37 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.25E-03 |
38 | GO:0004356: glutamate-ammonia ligase activity | 1.59E-03 |
39 | GO:0003989: acetyl-CoA carboxylase activity | 1.59E-03 |
40 | GO:0016846: carbon-sulfur lyase activity | 1.59E-03 |
41 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.96E-03 |
42 | GO:0004784: superoxide dismutase activity | 1.96E-03 |
43 | GO:0015081: sodium ion transmembrane transporter activity | 1.96E-03 |
44 | GO:0016615: malate dehydrogenase activity | 1.96E-03 |
45 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.96E-03 |
46 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.35E-03 |
47 | GO:0030060: L-malate dehydrogenase activity | 2.35E-03 |
48 | GO:0008135: translation factor activity, RNA binding | 3.67E-03 |
49 | GO:0003746: translation elongation factor activity | 3.98E-03 |
50 | GO:0003747: translation release factor activity | 4.15E-03 |
51 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 4.34E-03 |
52 | GO:0005381: iron ion transmembrane transporter activity | 4.65E-03 |
53 | GO:0016844: strictosidine synthase activity | 4.65E-03 |
54 | GO:0016788: hydrolase activity, acting on ester bonds | 5.17E-03 |
55 | GO:0008047: enzyme activator activity | 5.18E-03 |
56 | GO:0047372: acylglycerol lipase activity | 5.72E-03 |
57 | GO:0015386: potassium:proton antiporter activity | 5.72E-03 |
58 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.98E-03 |
59 | GO:0008378: galactosyltransferase activity | 6.28E-03 |
60 | GO:0031072: heat shock protein binding | 6.86E-03 |
61 | GO:0003725: double-stranded RNA binding | 6.86E-03 |
62 | GO:0004022: alcohol dehydrogenase (NAD) activity | 6.86E-03 |
63 | GO:0003774: motor activity | 7.46E-03 |
64 | GO:0031409: pigment binding | 8.71E-03 |
65 | GO:0051536: iron-sulfur cluster binding | 9.37E-03 |
66 | GO:0004857: enzyme inhibitor activity | 9.37E-03 |
67 | GO:0043130: ubiquitin binding | 9.37E-03 |
68 | GO:0003924: GTPase activity | 1.09E-02 |
69 | GO:0030570: pectate lyase activity | 1.22E-02 |
70 | GO:0019843: rRNA binding | 1.23E-02 |
71 | GO:0003727: single-stranded RNA binding | 1.29E-02 |
72 | GO:0047134: protein-disulfide reductase activity | 1.37E-02 |
73 | GO:0005509: calcium ion binding | 1.42E-02 |
74 | GO:0004791: thioredoxin-disulfide reductase activity | 1.60E-02 |
75 | GO:0019901: protein kinase binding | 1.68E-02 |
76 | GO:0015385: sodium:proton antiporter activity | 1.94E-02 |
77 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.94E-02 |
78 | GO:0016791: phosphatase activity | 2.03E-02 |
79 | GO:0008483: transaminase activity | 2.11E-02 |
80 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.11E-02 |
81 | GO:0005200: structural constituent of cytoskeleton | 2.11E-02 |
82 | GO:0016597: amino acid binding | 2.20E-02 |
83 | GO:0016168: chlorophyll binding | 2.39E-02 |
84 | GO:0008168: methyltransferase activity | 2.54E-02 |
85 | GO:0004721: phosphoprotein phosphatase activity | 2.58E-02 |
86 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.68E-02 |
87 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.97E-02 |
88 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.08E-02 |
89 | GO:0003993: acid phosphatase activity | 3.39E-02 |
90 | GO:0042393: histone binding | 3.60E-02 |
91 | GO:0052689: carboxylic ester hydrolase activity | 3.62E-02 |
92 | GO:0004185: serine-type carboxypeptidase activity | 3.93E-02 |
93 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.16E-02 |
94 | GO:0043621: protein self-association | 4.16E-02 |
95 | GO:0005525: GTP binding | 4.17E-02 |
96 | GO:0003735: structural constituent of ribosome | 4.40E-02 |
97 | GO:0051287: NAD binding | 4.50E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0042579: microbody | 0.00E+00 |
2 | GO:0043235: receptor complex | 0.00E+00 |
3 | GO:0009507: chloroplast | 5.51E-28 |
4 | GO:0009570: chloroplast stroma | 2.12E-20 |
5 | GO:0009579: thylakoid | 1.79E-16 |
6 | GO:0009535: chloroplast thylakoid membrane | 2.13E-16 |
7 | GO:0009941: chloroplast envelope | 2.41E-13 |
8 | GO:0009543: chloroplast thylakoid lumen | 9.04E-11 |
9 | GO:0009534: chloroplast thylakoid | 7.21E-09 |
10 | GO:0009654: photosystem II oxygen evolving complex | 1.44E-08 |
11 | GO:0031977: thylakoid lumen | 8.38E-08 |
12 | GO:0048046: apoplast | 1.23E-06 |
13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.54E-06 |
14 | GO:0019898: extrinsic component of membrane | 5.27E-06 |
15 | GO:0030095: chloroplast photosystem II | 2.08E-05 |
16 | GO:0031361: integral component of thylakoid membrane | 1.80E-04 |
17 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.80E-04 |
18 | GO:0016020: membrane | 2.25E-04 |
19 | GO:0010007: magnesium chelatase complex | 6.61E-04 |
20 | GO:0033281: TAT protein transport complex | 6.61E-04 |
21 | GO:0009317: acetyl-CoA carboxylase complex | 6.61E-04 |
22 | GO:0030658: transport vesicle membrane | 9.45E-04 |
23 | GO:0009517: PSII associated light-harvesting complex II | 1.25E-03 |
24 | GO:0009522: photosystem I | 1.47E-03 |
25 | GO:0009523: photosystem II | 1.57E-03 |
26 | GO:0010287: plastoglobule | 1.80E-03 |
27 | GO:0010319: stromule | 2.16E-03 |
28 | GO:0009295: nucleoid | 2.16E-03 |
29 | GO:0009501: amyloplast | 3.21E-03 |
30 | GO:0000307: cyclin-dependent protein kinase holoenzyme complex | 3.67E-03 |
31 | GO:0009539: photosystem II reaction center | 3.67E-03 |
32 | GO:0005763: mitochondrial small ribosomal subunit | 4.15E-03 |
33 | GO:0045298: tubulin complex | 4.15E-03 |
34 | GO:0016459: myosin complex | 5.18E-03 |
35 | GO:0005618: cell wall | 6.29E-03 |
36 | GO:0009536: plastid | 6.36E-03 |
37 | GO:0009508: plastid chromosome | 6.86E-03 |
38 | GO:0030076: light-harvesting complex | 8.08E-03 |
39 | GO:0042651: thylakoid membrane | 1.00E-02 |
40 | GO:0005840: ribosome | 1.72E-02 |
41 | GO:0022626: cytosolic ribosome | 2.13E-02 |
42 | GO:0030529: intracellular ribonucleoprotein complex | 2.30E-02 |
43 | GO:0019005: SCF ubiquitin ligase complex | 2.77E-02 |
44 | GO:0005643: nuclear pore | 2.77E-02 |
45 | GO:0031969: chloroplast membrane | 3.27E-02 |